BLASTX nr result
ID: Coptis24_contig00008955
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008955 (3576 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 1432 0.0 emb|CBI19841.3| unnamed protein product [Vitis vinifera] 1378 0.0 ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co... 1340 0.0 gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi... 1335 0.0 ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g... 1335 0.0 >ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera] Length = 1065 Score = 1432 bits (3706), Expect = 0.0 Identities = 732/1083 (67%), Positives = 815/1083 (75%), Gaps = 23/1083 (2%) Frame = +2 Query: 104 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283 MGVPAFYRWLAEKY G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60 Query: 284 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120 Query: 464 XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643 GRKLPPKQ+SQVCDSNVITPGT FM VLS+ALQYYIH Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180 Query: 644 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML Sbjct: 181 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240 Query: 824 LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000 LATHEVHFSILRE+VFT QQDKCF+CGQ+GHLAA+CEGKAKRK G+FDEKG+ +++ KK Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300 Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180 PYQFLNIWTLREYL YEMRIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA Sbjct: 301 PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360 Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360 INLL+AVYKKE AMGGYLTDSSK LS VEHFIQAVG YEDKIFQKRARLHQRQA+RIK Sbjct: 361 INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420 Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540 REK Q RRGDD +PQ KPE LVPV+ Y GSRL+SA PSPYQ E ++ + G Sbjct: 421 REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHE--------IKSKQSG 472 Query: 1541 TSKGKRSDSRNNKVPR-SSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLF 1717 TS S+ KV R SS A+VGAAIVEAEN LE E +NK+ELK KLK+L+REKSDLF Sbjct: 473 TS-----GSQGRKVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLF 527 Query: 1718 NSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGV 1897 NS N EEDKVKLG+ GWKERYYEEKFS K+ +E EA+R DVVL+YTEGLCWVMHYYYEGV Sbjct: 528 NSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGV 587 Query: 1898 CSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELM 2077 CSWQWFYPYHYAPFASD+K L QL I+FELGSPFKPFNQL+GVFPAAS HALPE YR+LM Sbjct: 588 CSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLM 647 Query: 2078 TSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNS 2257 T +SPI+DFYPTDFEVDMNGKRFAWQGIAKLPFIDE RLL E+ K+EHTL EEE RRNS Sbjct: 648 TDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNS 707 Query: 2258 VMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPC 2437 VM DMLFV +SHPLSPYIFSL D+ K+L+D ER EVKE +DP+ASGGMNGY++LC DPC Sbjct: 708 VMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPC 767 Query: 2438 PSIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWH 2617 P IF SP+ LEDIM+N VI AIY LPDAHKHITRPP GV FPKKIV+VGDL+P P LWH Sbjct: 768 PPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWH 827 Query: 2618 EDIGKKPWE--RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSGVQQMHQSQLPYGTSLY 2791 ED G++PWE RQN GT SGRQL E AHRLV NSLQ+K +G + PY + Y Sbjct: 828 EDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAERNGFGDQMHAPPPYPAAPY 887 Query: 2792 GS--HPHPNGKHNNQEHQRSV---PPYNNRLANSSFRGYEPPDGSVHQNASSSLYERSNS 2956 G + + +++NQEH R P Y+++ S + H+ + Sbjct: 888 GPPLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDHRYDQPHASSATGH 947 Query: 2957 LYGRNNWPATQRRDSPVHG-HGTGSFQNPQLQYR-QHVAPPPMIANSHVHPRGGYNGKH- 3127 Y R SPVHG + G QN Y + A + A + + +GG+N H Sbjct: 948 HYNR----------SPVHGYYQPGFHQNDGPGYHPRQEAQTHIPAGAQLPGQGGHNSHHG 997 Query: 3128 -QAYGSSSNHQRGGRQAPAANS----------RGLSRDYNHPQHQGNLYANLGRGANGRP 3274 Q+YG+SS H+ P N+ +G R Y HPQ GN Y+ L R AN P Sbjct: 998 YQSYGASSYHEWASGWPPEGNNQSNPRGHGHPQGNPRGYGHPQQLGNQYSVLDRRANRGP 1057 Query: 3275 PPP 3283 PPP Sbjct: 1058 PPP 1060 >emb|CBI19841.3| unnamed protein product [Vitis vinifera] Length = 870 Score = 1378 bits (3567), Expect = 0.0 Identities = 678/883 (76%), Positives = 734/883 (83%), Gaps = 4/883 (0%) Frame = +2 Query: 104 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283 MGVPAFYRWLAEKY G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60 Query: 284 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120 Query: 464 XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643 GRKLPPKQ+SQVCDSNVITPGT FM VLS+ALQYYIH Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180 Query: 644 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML Sbjct: 181 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240 Query: 824 LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000 LATHEVHFSILRE+VFT QQDKCF+CGQ+GHLAA+CEGKAKRK G+FDEKG+ +++ KK Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300 Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180 PYQFLNIWTLREYL YEMRIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA Sbjct: 301 PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360 Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360 INLL+AVYKKE AMGGYLTDSSK LS VEHFIQAVG YEDKIFQKRARLHQRQA+RIK Sbjct: 361 INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420 Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540 REK Q RRGDD +PQ KPE LVPV+ Y GSRL+SA PSPYQ E ++ + G Sbjct: 421 REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHE--------IKSKQSG 472 Query: 1541 TSKGKRSDSRNNKVPR-SSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLF 1717 TS S+ KV R SS A+VGAAIVEAEN LE E +NK+ELK KLK+L+REKSDLF Sbjct: 473 TS-----GSQGRKVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLF 527 Query: 1718 NSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGV 1897 NS N EEDKVKLG+ GWKERYYEEKFS K+ +E EA+R DVVL+YTEGLCWVMHYYYEGV Sbjct: 528 NSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGV 587 Query: 1898 CSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELM 2077 CSWQWFYPYHYAPFASD+K L QL I+FELGSPFKPFNQL+GVFPAAS HALPE YR+LM Sbjct: 588 CSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLM 647 Query: 2078 TSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNS 2257 T +SPI+DFYPTDFEVDMNGKRFAWQGIAKLPFIDE RLL E+ K+EHTL EEE RRNS Sbjct: 648 TDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNS 707 Query: 2258 VMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPC 2437 VM DMLFV +SHPLSPYIFSL D+ K+L+D ER EVKE +DP+ASGGMNGY++LC DPC Sbjct: 708 VMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPC 767 Query: 2438 PSIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWH 2617 P IF SP+ LEDIM+N VI AIY LPDAHKHITRPP GV FPKKIV+VGDL+P P LWH Sbjct: 768 PPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWH 827 Query: 2618 EDIGKKPWE--RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPS 2740 ED G++PWE RQN GT SGRQL E AHRLV NSLQ+K PS Sbjct: 828 EDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAEPS 870 >ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis] gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis] Length = 1113 Score = 1340 bits (3468), Expect = 0.0 Identities = 698/1104 (63%), Positives = 798/1104 (72%), Gaps = 43/1104 (3%) Frame = +2 Query: 104 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283 MGVPAFYRWLAEKY GVKIPVD ++PNPNNIEYDNLYLDMNGIIH Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60 Query: 284 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463 PCFHPEDRPSPT+F+EVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS Sbjct: 61 PCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120 Query: 464 XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643 GRKLPPK+ SQV DSN+ITPGT FMAVLSIALQYYIH Sbjct: 121 AAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHL 180 Query: 644 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823 RLNNDPGWK +KVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIML Sbjct: 181 RLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240 Query: 824 LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000 LATHE+HFSILRE+VFT QQDKCFLCGQ+GHLAA+CEGKAKRK G+FDEKG+ + KK Sbjct: 241 LATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKK 300 Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180 PYQFLNIWTLREYL EMRIPN PF+IDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA Sbjct: 301 PYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360 Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360 INLL+AVYKKEF AMGGYLTD K LS+VEHFIQAVG YEDKIFQKRARLHQRQ++RIK Sbjct: 361 INLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 420 Query: 1361 REKGQTR--RGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNE 1534 REK Q+R RGDD +PQ +PESLVPVA + GSRL+SA PSP+Q + + V Sbjct: 421 REKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPSPFQHS--LEAADLDVRSAH 478 Query: 1535 VGTSKGKRSDSRNNKVPR-SSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSD 1711 GK S + +KV R SS ASVGAAIVEAENSLE+E ENK+ELK KLK+++REKSD Sbjct: 479 FSALDGKGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHENKDELKAKLKEILREKSD 538 Query: 1712 LFNSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYE 1891 FNS N EEDK++LGDPGWKERYYEEKFS K+ +ELE IR+DVVLRYTEGLCWVMHYYYE Sbjct: 539 AFNSKNPEEDKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTEGLCWVMHYYYE 598 Query: 1892 GVCSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRE 2071 GVCSWQWFYPYHYAPFASD+K L QL+I FELGSPFKPFNQL+GVFPAAS HALP HYR+ Sbjct: 599 GVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAASSHALPVHYRK 658 Query: 2072 LMTSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRR 2251 LM+ +SPI+DFYPTDFEVDMNGKR+AWQGIAKLPFIDE RLL E+ K+EHTL EEE RR Sbjct: 659 LMSDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIEHTLTEEEARR 718 Query: 2252 NSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNED 2431 NS M DMLFV SH L+ I+ L + KQL+D+ER EVKE I+P+ S GMNGY++ C+ D Sbjct: 719 NSAMFDMLFVLSSHSLAESIYLLDNNCKQLTDRERVEVKERINPELSDGMNGYISPCSGD 778 Query: 2432 PCPSIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPAL 2611 P IF SPV G+EDI++N VI AIY LPD HKH+TRPP GVIFPKKIV V DL+P P L Sbjct: 779 THPPIFRSPVAGMEDILDNGVICAIYRLPDPHKHVTRPPAGVIFPKKIVNVVDLKPDPVL 838 Query: 2612 WHEDIGKKPWE--RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSG-VQQMHQSQLPYGT 2782 WHED G+KPWE R+N GT SGRQL E +HRLV NSLQ+K +G +H PY Sbjct: 839 WHEDSGRKPWESDRRNPPGTISGRQLGEASHRLVVNSLQMKVDHNGYANHLHAPIPPYAA 898 Query: 2783 SLY---------GSH---------PHPNGKHNNQEHQRSVPPYNNRLANSSFRGYEPPDG 2908 + + GSH P + H Q + YNN + + Y P G Sbjct: 899 TAHVPVHSSYANGSHDPRRDRTGQPRMDYSHAGQNRFFNPTQYNNN--HGYGQSYASP-G 955 Query: 2909 SVHQNASSSLYERSNSLYGRNNWPATQR----RDSPVHGHGTGSFQNPQLQYRQHVAPPP 3076 + H + S YER N G+++ + ++ P + HG+ + + Y+ Sbjct: 956 NAHFSGSRPQYERENRSNGQHSRQVYLQPEFHQNGPRYLHGSMAGTSESYAYQDDYDG-- 1013 Query: 3077 MIANSHVHPRGGYNGKHQAYGSSSNHQRGGRQAPAANSRGLSRDYNHPQHQGNLYANL-- 3250 SH PR ++HQ+ G P + R Y+ Q +GN Y+ L Sbjct: 1014 --YQSHQPPR------------DASHQQWGNGLPPPVNLNFPRGYDQSQQRGNRYSVLET 1059 Query: 3251 ----------GRGANGRPP--PPH 3286 G + RPP PPH Sbjct: 1060 RGSRNPQLPGASGLDRRPPPQPPH 1083 >gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group] Length = 1068 Score = 1335 bits (3456), Expect = 0.0 Identities = 689/1091 (63%), Positives = 787/1091 (72%), Gaps = 30/1091 (2%) Frame = +2 Query: 104 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283 MGVPAFYRWLAEKY GVK+PVDT+KPNPN +E+DNLYLDMNGIIH Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60 Query: 284 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463 PCFHPEDRPSPTTF EVFQCMFDYIDRLFVMVRPRK++YMAIDGVAPRAKMNQQRS Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120 Query: 464 XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643 GRKLPPKQ+SQ CDSNVITPGT FMAVLSIALQYYIH Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180 Query: 644 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823 RLN DPGWK +KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML Sbjct: 181 RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240 Query: 824 LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000 LATHEVHFSILREVV+T QQDKCFLCGQ+GHLAANCEGK KRK G+FDEKGE + + KK Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGE-AIVPKK 299 Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180 PYQFLNIWTLREYL YE R+ N PF IDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359 Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360 INLL+AVYKKEF +MGGYLTD+ L++VEHFIQAVG YEDKIFQKRARLHQRQA+RIK Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419 Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540 REK Q +RGDD++P + + +VPVA ++GSRL+S PSPY+ +GS +KN Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYE------QNGS--DKN--- 468 Query: 1541 TSKGKRSDSRNNKVPRSSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLFN 1720 + GK S +R SS +S+ AAIVEAEN LE + +ENKE+LKT LKD +REKSD+FN Sbjct: 469 -NGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFN 527 Query: 1721 SSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGVC 1900 S N EEDK+KLG+PGW+ERYYEEKF A++ ++E IR+DVVL+YTEGLCWVMHYYYEGVC Sbjct: 528 SENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVC 587 Query: 1901 SWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELMT 2080 SWQWFYPYHYAPFASD+ GL QL I FELGSPFKPF+QLMGVFPAAS HALP YR+LMT Sbjct: 588 SWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMT 647 Query: 2081 SSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNSV 2260 ++SPI+DFYPTDFEVDMNGKR++WQGIAKLPFIDE RLL EI KVEHTL EE RRNS+ Sbjct: 648 DANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSI 707 Query: 2261 MSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPCP 2440 M +MLFV SHPLSPYI+SL+ K L D+ER E+KE IDP +SGGMNGY++LC+ DPCP Sbjct: 708 MFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCP 767 Query: 2441 SIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWHE 2620 +F SPV+GLEDIM+N VI IY LPD+HKHI RPP GVI PKK V DL+PPP LWHE Sbjct: 768 PVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHE 827 Query: 2621 DIGKKPWE-----------RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSGVQQMHQSQ 2767 D G++P + RQN +G SGRQL E AHRLV NSL ++G Q + Sbjct: 828 DSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSG----GQYNTPS 883 Query: 2768 LPYGTSLYGSHPHPNGKHNNQEHQRSVPPYNNRLANSSF-RGYEPPDGSVHQNASS-SLY 2941 +PY T + G P+PNG E L N Y G ++ S S Y Sbjct: 884 MPYQTIMNGM-PYPNGIPPRMEQPAPGWHVPGDLPNGQVPPAYASSSGHYQKDRSGPSQY 942 Query: 2942 ERSNS---LYGRNNWPATQRRDSPVHGHGTGSFQN---PQLQYRQHVAPPPMIANSHVHP 3103 R N Y R+N ++ R P H G S+Q+ P Q+ PPP Sbjct: 943 GRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSAPSAGPGQYAQPPPY-------- 994 Query: 3104 RGGYNGKHQ--AYGSSSNHQRGGRQ--------APAANSRGLSRDYNHPQHQGNLYANLG 3253 GGY +Q YG Q+ +Q P +R + PQ N Y L Sbjct: 995 AGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGGAPPARPNSRPQQSQNRYNTLD 1054 Query: 3254 RGANGRPPPPH 3286 R +N RPPP H Sbjct: 1055 RNSNRRPPPGH 1065 >ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group] gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1068 Score = 1335 bits (3455), Expect = 0.0 Identities = 688/1091 (63%), Positives = 787/1091 (72%), Gaps = 30/1091 (2%) Frame = +2 Query: 104 MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283 MGVPAFYRWLAEKY GVK+PVDT+KPNPN +E+DNLYLDMNGIIH Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60 Query: 284 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463 PCFHPEDRPSPTTF EVFQCMFDYIDRLFVMVRPRK++YMAIDGVAPRAKMNQQRS Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120 Query: 464 XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643 GRKLPPKQ+SQ CDSNVITPGT FMAVLSIALQYYIH Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180 Query: 644 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823 RLN DPGWK +KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML Sbjct: 181 RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240 Query: 824 LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000 LATHEVHFSILREVV+T QQDKCFLCGQ+GHLAANCEGK KRK G+FDEKGE + + KK Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGE-AIVPKK 299 Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180 PYQFLNIWTLREYL YE R+ N PF IDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359 Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360 INLL+AVYKKEF +MGGYLTD+ L++VEHFIQAVG YEDKIFQKRARLHQRQA+RIK Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419 Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540 REK Q +RGDD++P + + +VPVA ++GSRL+S +PSPY+ +GS +KN Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYE------QNGS--DKN--- 468 Query: 1541 TSKGKRSDSRNNKVPRSSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLFN 1720 + GK S +R SS +S+ AAIVEAEN LE + +ENKE+LKT LKD +REKSD+FN Sbjct: 469 -NGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFN 527 Query: 1721 SSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGVC 1900 S N EEDK+KLG+PGW+ERYYEEKF A++ ++E IR+DVVL+YTEGLCWVMHYYYEGVC Sbjct: 528 SENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVC 587 Query: 1901 SWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELMT 2080 SWQWFYPYHYAPFASD+ GL QL I FELGSPFKPF+QLMGVFPAAS HALP YR+LMT Sbjct: 588 SWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMT 647 Query: 2081 SSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNSV 2260 ++SPI+DFYPTDFEVDMNGKR++WQGIAKLPFIDE RLL EI KVEHTL EE RRNS+ Sbjct: 648 DANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSI 707 Query: 2261 MSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPCP 2440 M +MLFV SHPLSPYI+SL+ K L D+ER E+KE IDP +SGGMNGY++LC+ DPCP Sbjct: 708 MFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCP 767 Query: 2441 SIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWHE 2620 +F SPV+GLEDIM+N VI IY LPD+HKHI RPP GVI PKK V DL+PPP LWHE Sbjct: 768 PVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHE 827 Query: 2621 DIGKKPWE-----------RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSGVQQMHQSQ 2767 D G++P + RQN +G SGRQL E AHRLV NSL ++G Q + Sbjct: 828 DSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSG----GQYNTPS 883 Query: 2768 LPYGTSLYGSHPHPNGKHNNQEHQRSVPPYNNRLANSSFRGYEPPDGSVHQNASS--SLY 2941 +PY T + G P+PNG E L N +QN S S Y Sbjct: 884 MPYQTIMNGM-PYPNGIPPRMEQPAPGWHVPGDLPNGQVPPAYASSSGHYQNDRSGPSQY 942 Query: 2942 ERSNS---LYGRNNWPATQRRDSPVHGHGTGSFQN---PQLQYRQHVAPPPMIANSHVHP 3103 R N Y R+N ++ R P H G S+Q+ P ++ PPP Sbjct: 943 GRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSAPSAGPGRYAQPPPY-------- 994 Query: 3104 RGGYNGKHQ--AYGSSSNHQRGGRQ--------APAANSRGLSRDYNHPQHQGNLYANLG 3253 GGY +Q YG Q+ +Q P +R + PQ N Y L Sbjct: 995 AGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGGAPPARPNSRPQQSQNRYNTLD 1054 Query: 3254 RGANGRPPPPH 3286 R +N RPPP H Sbjct: 1055 RNSNRRPPPGH 1065