BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008955
         (3576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...  1432   0.0  
emb|CBI19841.3| unnamed protein product [Vitis vinifera]             1378   0.0  
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co...  1340   0.0  
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi...  1335   0.0  
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g...  1335   0.0  

>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score = 1432 bits (3706), Expect = 0.0
 Identities = 732/1083 (67%), Positives = 815/1083 (75%), Gaps = 23/1083 (2%)
 Frame = +2

Query: 104  MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283
            MGVPAFYRWLAEKY                G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 284  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463
            PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 464  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643
                                  GRKLPPKQ+SQVCDSNVITPGT FM VLS+ALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180

Query: 644  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823
            RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240

Query: 824  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000
            LATHEVHFSILRE+VFT  QQDKCF+CGQ+GHLAA+CEGKAKRK G+FDEKG+ +++ KK
Sbjct: 241  LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300

Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180
            PYQFLNIWTLREYL YEMRIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301  PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360

Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360
            INLL+AVYKKE  AMGGYLTDSSK  LS VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 361  INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420

Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540
            REK Q RRGDD +PQ KPE LVPV+ Y GSRL+SA  PSPYQ  E        ++  + G
Sbjct: 421  REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHE--------IKSKQSG 472

Query: 1541 TSKGKRSDSRNNKVPR-SSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLF 1717
            TS      S+  KV R SS A+VGAAIVEAEN LE E  +NK+ELK KLK+L+REKSDLF
Sbjct: 473  TS-----GSQGRKVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLF 527

Query: 1718 NSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGV 1897
            NS N EEDKVKLG+ GWKERYYEEKFS K+ +E EA+R DVVL+YTEGLCWVMHYYYEGV
Sbjct: 528  NSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGV 587

Query: 1898 CSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELM 2077
            CSWQWFYPYHYAPFASD+K L QL I+FELGSPFKPFNQL+GVFPAAS HALPE YR+LM
Sbjct: 588  CSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLM 647

Query: 2078 TSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNS 2257
            T  +SPI+DFYPTDFEVDMNGKRFAWQGIAKLPFIDE RLL E+ K+EHTL EEE RRNS
Sbjct: 648  TDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNS 707

Query: 2258 VMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPC 2437
            VM DMLFV +SHPLSPYIFSL D+ K+L+D ER EVKE +DP+ASGGMNGY++LC  DPC
Sbjct: 708  VMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPC 767

Query: 2438 PSIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWH 2617
            P IF SP+  LEDIM+N VI AIY LPDAHKHITRPP GV FPKKIV+VGDL+P P LWH
Sbjct: 768  PPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWH 827

Query: 2618 EDIGKKPWE--RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSGVQQMHQSQLPYGTSLY 2791
            ED G++PWE  RQN  GT SGRQL E AHRLV NSLQ+K   +G      +  PY  + Y
Sbjct: 828  EDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAERNGFGDQMHAPPPYPAAPY 887

Query: 2792 GS--HPHPNGKHNNQEHQRSV---PPYNNRLANSSFRGYEPPDGSVHQNASSSLYERSNS 2956
            G     + + +++NQEH R     P Y+++    S       +   H+         +  
Sbjct: 888  GPPLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDHRYDQPHASSATGH 947

Query: 2957 LYGRNNWPATQRRDSPVHG-HGTGSFQNPQLQYR-QHVAPPPMIANSHVHPRGGYNGKH- 3127
             Y R          SPVHG +  G  QN    Y  +  A   + A + +  +GG+N  H 
Sbjct: 948  HYNR----------SPVHGYYQPGFHQNDGPGYHPRQEAQTHIPAGAQLPGQGGHNSHHG 997

Query: 3128 -QAYGSSSNHQRGGRQAPAANS----------RGLSRDYNHPQHQGNLYANLGRGANGRP 3274
             Q+YG+SS H+      P  N+          +G  R Y HPQ  GN Y+ L R AN  P
Sbjct: 998  YQSYGASSYHEWASGWPPEGNNQSNPRGHGHPQGNPRGYGHPQQLGNQYSVLDRRANRGP 1057

Query: 3275 PPP 3283
            PPP
Sbjct: 1058 PPP 1060


>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score = 1378 bits (3567), Expect = 0.0
 Identities = 678/883 (76%), Positives = 734/883 (83%), Gaps = 4/883 (0%)
 Frame = +2

Query: 104  MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283
            MGVPAFYRWLAEKY                G+ IPVDT+KPNPNNIEYDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 284  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463
            PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 464  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643
                                  GRKLPPKQ+SQVCDSNVITPGT FM VLS+ALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180

Query: 644  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823
            RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240

Query: 824  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000
            LATHEVHFSILRE+VFT  QQDKCF+CGQ+GHLAA+CEGKAKRK G+FDEKG+ +++ KK
Sbjct: 241  LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300

Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180
            PYQFLNIWTLREYL YEMRIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301  PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360

Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360
            INLL+AVYKKE  AMGGYLTDSSK  LS VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 361  INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420

Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540
            REK Q RRGDD +PQ KPE LVPV+ Y GSRL+SA  PSPYQ  E        ++  + G
Sbjct: 421  REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHE--------IKSKQSG 472

Query: 1541 TSKGKRSDSRNNKVPR-SSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLF 1717
            TS      S+  KV R SS A+VGAAIVEAEN LE E  +NK+ELK KLK+L+REKSDLF
Sbjct: 473  TS-----GSQGRKVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLF 527

Query: 1718 NSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGV 1897
            NS N EEDKVKLG+ GWKERYYEEKFS K+ +E EA+R DVVL+YTEGLCWVMHYYYEGV
Sbjct: 528  NSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGV 587

Query: 1898 CSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELM 2077
            CSWQWFYPYHYAPFASD+K L QL I+FELGSPFKPFNQL+GVFPAAS HALPE YR+LM
Sbjct: 588  CSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLM 647

Query: 2078 TSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNS 2257
            T  +SPI+DFYPTDFEVDMNGKRFAWQGIAKLPFIDE RLL E+ K+EHTL EEE RRNS
Sbjct: 648  TDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNS 707

Query: 2258 VMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPC 2437
            VM DMLFV +SHPLSPYIFSL D+ K+L+D ER EVKE +DP+ASGGMNGY++LC  DPC
Sbjct: 708  VMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPC 767

Query: 2438 PSIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWH 2617
            P IF SP+  LEDIM+N VI AIY LPDAHKHITRPP GV FPKKIV+VGDL+P P LWH
Sbjct: 768  PPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWH 827

Query: 2618 EDIGKKPWE--RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPS 2740
            ED G++PWE  RQN  GT SGRQL E AHRLV NSLQ+K  PS
Sbjct: 828  EDNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQVKAEPS 870


>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1113

 Score = 1340 bits (3468), Expect = 0.0
 Identities = 698/1104 (63%), Positives = 798/1104 (72%), Gaps = 43/1104 (3%)
 Frame = +2

Query: 104  MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283
            MGVPAFYRWLAEKY                GVKIPVD ++PNPNNIEYDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60

Query: 284  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463
            PCFHPEDRPSPT+F+EVFQCMFDYIDRLFVMVRPRK+LYMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120

Query: 464  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643
                                  GRKLPPK+ SQV DSN+ITPGT FMAVLSIALQYYIH 
Sbjct: 121  AAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHL 180

Query: 644  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823
            RLNNDPGWK +KVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIML 
Sbjct: 181  RLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240

Query: 824  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000
            LATHE+HFSILRE+VFT  QQDKCFLCGQ+GHLAA+CEGKAKRK G+FDEKG+   + KK
Sbjct: 241  LATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKK 300

Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180
            PYQFLNIWTLREYL  EMRIPN PF+IDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301  PYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360

Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360
            INLL+AVYKKEF AMGGYLTD  K  LS+VEHFIQAVG YEDKIFQKRARLHQRQ++RIK
Sbjct: 361  INLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 420

Query: 1361 REKGQTR--RGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNE 1534
            REK Q+R  RGDD +PQ +PESLVPVA + GSRL+SA  PSP+Q    +  +   V    
Sbjct: 421  REKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPSPFQHS--LEAADLDVRSAH 478

Query: 1535 VGTSKGKRSDSRNNKVPR-SSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSD 1711
                 GK S  + +KV R SS ASVGAAIVEAENSLE+E  ENK+ELK KLK+++REKSD
Sbjct: 479  FSALDGKGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHENKDELKAKLKEILREKSD 538

Query: 1712 LFNSSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYE 1891
             FNS N EEDK++LGDPGWKERYYEEKFS K+ +ELE IR+DVVLRYTEGLCWVMHYYYE
Sbjct: 539  AFNSKNPEEDKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTEGLCWVMHYYYE 598

Query: 1892 GVCSWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRE 2071
            GVCSWQWFYPYHYAPFASD+K L QL+I FELGSPFKPFNQL+GVFPAAS HALP HYR+
Sbjct: 599  GVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAASSHALPVHYRK 658

Query: 2072 LMTSSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRR 2251
            LM+  +SPI+DFYPTDFEVDMNGKR+AWQGIAKLPFIDE RLL E+ K+EHTL EEE RR
Sbjct: 659  LMSDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIEHTLTEEEARR 718

Query: 2252 NSVMSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNED 2431
            NS M DMLFV  SH L+  I+ L +  KQL+D+ER EVKE I+P+ S GMNGY++ C+ D
Sbjct: 719  NSAMFDMLFVLSSHSLAESIYLLDNNCKQLTDRERVEVKERINPELSDGMNGYISPCSGD 778

Query: 2432 PCPSIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPAL 2611
              P IF SPV G+EDI++N VI AIY LPD HKH+TRPP GVIFPKKIV V DL+P P L
Sbjct: 779  THPPIFRSPVAGMEDILDNGVICAIYRLPDPHKHVTRPPAGVIFPKKIVNVVDLKPDPVL 838

Query: 2612 WHEDIGKKPWE--RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSG-VQQMHQSQLPYGT 2782
            WHED G+KPWE  R+N  GT SGRQL E +HRLV NSLQ+K   +G    +H    PY  
Sbjct: 839  WHEDSGRKPWESDRRNPPGTISGRQLGEASHRLVVNSLQMKVDHNGYANHLHAPIPPYAA 898

Query: 2783 SLY---------GSH---------PHPNGKHNNQEHQRSVPPYNNRLANSSFRGYEPPDG 2908
            + +         GSH         P  +  H  Q    +   YNN   +   + Y  P G
Sbjct: 899  TAHVPVHSSYANGSHDPRRDRTGQPRMDYSHAGQNRFFNPTQYNNN--HGYGQSYASP-G 955

Query: 2909 SVHQNASSSLYERSNSLYGRNNWPATQR----RDSPVHGHGTGSFQNPQLQYRQHVAPPP 3076
            + H + S   YER N   G+++     +    ++ P + HG+ +  +    Y+       
Sbjct: 956  NAHFSGSRPQYERENRSNGQHSRQVYLQPEFHQNGPRYLHGSMAGTSESYAYQDDYDG-- 1013

Query: 3077 MIANSHVHPRGGYNGKHQAYGSSSNHQRGGRQAPAANSRGLSRDYNHPQHQGNLYANL-- 3250
                SH  PR             ++HQ+ G   P   +    R Y+  Q +GN Y+ L  
Sbjct: 1014 --YQSHQPPR------------DASHQQWGNGLPPPVNLNFPRGYDQSQQRGNRYSVLET 1059

Query: 3251 ----------GRGANGRPP--PPH 3286
                        G + RPP  PPH
Sbjct: 1060 RGSRNPQLPGASGLDRRPPPQPPH 1083


>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
          Length = 1068

 Score = 1335 bits (3456), Expect = 0.0
 Identities = 689/1091 (63%), Positives = 787/1091 (72%), Gaps = 30/1091 (2%)
 Frame = +2

Query: 104  MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283
            MGVPAFYRWLAEKY                GVK+PVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 284  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463
            PCFHPEDRPSPTTF EVFQCMFDYIDRLFVMVRPRK++YMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120

Query: 464  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643
                                  GRKLPPKQ+SQ CDSNVITPGT FMAVLSIALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180

Query: 644  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823
            RLN DPGWK +KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML 
Sbjct: 181  RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240

Query: 824  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000
            LATHEVHFSILREVV+T  QQDKCFLCGQ+GHLAANCEGK KRK G+FDEKGE + + KK
Sbjct: 241  LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGE-AIVPKK 299

Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180
            PYQFLNIWTLREYL YE R+ N PF IDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300  PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359

Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360
            INLL+AVYKKEF +MGGYLTD+    L++VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 360  INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419

Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540
            REK Q +RGDD++P  + + +VPVA ++GSRL+S   PSPY+       +GS  +KN   
Sbjct: 420  REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYE------QNGS--DKN--- 468

Query: 1541 TSKGKRSDSRNNKVPRSSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLFN 1720
             + GK S +R      SS +S+ AAIVEAEN LE + +ENKE+LKT LKD +REKSD+FN
Sbjct: 469  -NGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFN 527

Query: 1721 SSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGVC 1900
            S N EEDK+KLG+PGW+ERYYEEKF A++  ++E IR+DVVL+YTEGLCWVMHYYYEGVC
Sbjct: 528  SENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVC 587

Query: 1901 SWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELMT 2080
            SWQWFYPYHYAPFASD+ GL QL I FELGSPFKPF+QLMGVFPAAS HALP  YR+LMT
Sbjct: 588  SWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMT 647

Query: 2081 SSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNSV 2260
             ++SPI+DFYPTDFEVDMNGKR++WQGIAKLPFIDE RLL EI KVEHTL  EE RRNS+
Sbjct: 648  DANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSI 707

Query: 2261 MSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPCP 2440
            M +MLFV  SHPLSPYI+SL+ K   L D+ER E+KE IDP +SGGMNGY++LC+ DPCP
Sbjct: 708  MFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCP 767

Query: 2441 SIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWHE 2620
             +F SPV+GLEDIM+N VI  IY LPD+HKHI RPP GVI PKK V   DL+PPP LWHE
Sbjct: 768  PVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHE 827

Query: 2621 DIGKKPWE-----------RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSGVQQMHQSQ 2767
            D G++P +           RQN +G  SGRQL E AHRLV NSL  ++G     Q +   
Sbjct: 828  DSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSG----GQYNTPS 883

Query: 2768 LPYGTSLYGSHPHPNGKHNNQEHQRSVPPYNNRLANSSF-RGYEPPDGSVHQNASS-SLY 2941
            +PY T + G  P+PNG     E           L N      Y    G   ++ S  S Y
Sbjct: 884  MPYQTIMNGM-PYPNGIPPRMEQPAPGWHVPGDLPNGQVPPAYASSSGHYQKDRSGPSQY 942

Query: 2942 ERSNS---LYGRNNWPATQRRDSPVHGHGTGSFQN---PQLQYRQHVAPPPMIANSHVHP 3103
             R N     Y R+N   ++ R  P H  G  S+Q+   P     Q+  PPP         
Sbjct: 943  GRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSAPSAGPGQYAQPPPY-------- 994

Query: 3104 RGGYNGKHQ--AYGSSSNHQRGGRQ--------APAANSRGLSRDYNHPQHQGNLYANLG 3253
             GGY   +Q   YG     Q+  +Q         P       +R  + PQ   N Y  L 
Sbjct: 995  AGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGGAPPARPNSRPQQSQNRYNTLD 1054

Query: 3254 RGANGRPPPPH 3286
            R +N RPPP H
Sbjct: 1055 RNSNRRPPPGH 1065


>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
            gi|56785082|dbj|BAD82721.1| putative 5'-3'
            exoribonuclease (XRN3) [Oryza sativa Japonica Group]
            gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
            Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1068

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 688/1091 (63%), Positives = 787/1091 (72%), Gaps = 30/1091 (2%)
 Frame = +2

Query: 104  MGVPAFYRWLAEKYSXXXXXXXXXXXXXXSGVKIPVDTTKPNPNNIEYDNLYLDMNGIIH 283
            MGVPAFYRWLAEKY                GVK+PVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 284  PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKVLYMAIDGVAPRAKMNQQRSXXXX 463
            PCFHPEDRPSPTTF EVFQCMFDYIDRLFVMVRPRK++YMAIDGVAPRAKMNQQRS    
Sbjct: 61   PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120

Query: 464  XXXXXXXXXXXXXXXXXXXXXXGRKLPPKQESQVCDSNVITPGTHFMAVLSIALQYYIHQ 643
                                  GRKLPPKQ+SQ CDSNVITPGT FMAVLSIALQYYIH 
Sbjct: 121  AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180

Query: 644  RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 823
            RLN DPGWK +KVILSDANVPGEGEHKIMSYIR QRNLPGF+PNTRHCLYGLDADLIML 
Sbjct: 181  RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240

Query: 824  LATHEVHFSILREVVFT-AQQDKCFLCGQIGHLAANCEGKAKRKFGQFDEKGEGSTLEKK 1000
            LATHEVHFSILREVV+T  QQDKCFLCGQ+GHLAANCEGK KRK G+FDEKGE + + KK
Sbjct: 241  LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGE-AIVPKK 299

Query: 1001 PYQFLNIWTLREYLGYEMRIPNAPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 1180
            PYQFLNIWTLREYL YE R+ N PF IDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300  PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359

Query: 1181 INLLVAVYKKEFVAMGGYLTDSSKAILSRVEHFIQAVGCYEDKIFQKRARLHQRQADRIK 1360
            INLL+AVYKKEF +MGGYLTD+    L++VEHFIQAVG YEDKIFQKRARLHQRQA+RIK
Sbjct: 360  INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419

Query: 1361 REKGQTRRGDDVEPQFKPESLVPVAHYRGSRLSSAALPSPYQPKEYVHHSGSVVEKNEVG 1540
            REK Q +RGDD++P  + + +VPVA ++GSRL+S  +PSPY+       +GS  +KN   
Sbjct: 420  REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYE------QNGS--DKN--- 468

Query: 1541 TSKGKRSDSRNNKVPRSSEASVGAAIVEAENSLEMETQENKEELKTKLKDLIREKSDLFN 1720
             + GK S +R      SS +S+ AAIVEAEN LE + +ENKE+LKT LKD +REKSD+FN
Sbjct: 469  -NGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFN 527

Query: 1721 SSNQEEDKVKLGDPGWKERYYEEKFSAKSADELEAIRKDVVLRYTEGLCWVMHYYYEGVC 1900
            S N EEDK+KLG+PGW+ERYYEEKF A++  ++E IR+DVVL+YTEGLCWVMHYYYEGVC
Sbjct: 528  SENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVC 587

Query: 1901 SWQWFYPYHYAPFASDIKGLDQLEINFELGSPFKPFNQLMGVFPAASCHALPEHYRELMT 2080
            SWQWFYPYHYAPFASD+ GL QL I FELGSPFKPF+QLMGVFPAAS HALP  YR+LMT
Sbjct: 588  SWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMT 647

Query: 2081 SSSSPIVDFYPTDFEVDMNGKRFAWQGIAKLPFIDEGRLLNEIGKVEHTLMEEEVRRNSV 2260
             ++SPI+DFYPTDFEVDMNGKR++WQGIAKLPFIDE RLL EI KVEHTL  EE RRNS+
Sbjct: 648  DANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSI 707

Query: 2261 MSDMLFVTVSHPLSPYIFSLSDKNKQLSDKERAEVKEIIDPKASGGMNGYLALCNEDPCP 2440
            M +MLFV  SHPLSPYI+SL+ K   L D+ER E+KE IDP +SGGMNGY++LC+ DPCP
Sbjct: 708  MFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCP 767

Query: 2441 SIFSSPVNGLEDIMNNHVIMAIYILPDAHKHITRPPTGVIFPKKIVAVGDLRPPPALWHE 2620
             +F SPV+GLEDIM+N VI  IY LPD+HKHI RPP GVI PKK V   DL+PPP LWHE
Sbjct: 768  PVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHE 827

Query: 2621 DIGKKPWE-----------RQNRSGTNSGRQLSEDAHRLVTNSLQIKTGPSGVQQMHQSQ 2767
            D G++P +           RQN +G  SGRQL E AHRLV NSL  ++G     Q +   
Sbjct: 828  DSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSG----GQYNTPS 883

Query: 2768 LPYGTSLYGSHPHPNGKHNNQEHQRSVPPYNNRLANSSFRGYEPPDGSVHQNASS--SLY 2941
            +PY T + G  P+PNG     E           L N             +QN  S  S Y
Sbjct: 884  MPYQTIMNGM-PYPNGIPPRMEQPAPGWHVPGDLPNGQVPPAYASSSGHYQNDRSGPSQY 942

Query: 2942 ERSNS---LYGRNNWPATQRRDSPVHGHGTGSFQN---PQLQYRQHVAPPPMIANSHVHP 3103
             R N     Y R+N   ++ R  P H  G  S+Q+   P     ++  PPP         
Sbjct: 943  GRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSAPSAGPGRYAQPPPY-------- 994

Query: 3104 RGGYNGKHQ--AYGSSSNHQRGGRQ--------APAANSRGLSRDYNHPQHQGNLYANLG 3253
             GGY   +Q   YG     Q+  +Q         P       +R  + PQ   N Y  L 
Sbjct: 995  AGGYGRSYQPAPYGGGQQWQQQQQQPYGSYAGSGPYGGGAPPARPNSRPQQSQNRYNTLD 1054

Query: 3254 RGANGRPPPPH 3286
            R +N RPPP H
Sbjct: 1055 RNSNRRPPPGH 1065