BLASTX nr result
ID: Coptis24_contig00008948
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008948 (1394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteo... 439 e-120 gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica] 435 e-119 ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo... 430 e-118 ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycin... 430 e-118 ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|1... 427 e-117 >ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like [Glycine max] Length = 304 Score = 439 bits (1128), Expect = e-120 Identities = 232/310 (74%), Positives = 259/310 (83%), Gaps = 7/310 (2%) Frame = +1 Query: 109 MEVSTTMSSRFTLNKPT----TLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXXX 276 MEV+T SS F LNKP + S+T P + T+ P V++SL+TSF AP Sbjct: 1 MEVATAASS-FALNKPMLALPSSSRTVTPIRCMNTSTSP-----VRTSLSTSFVAPYAGI 54 Query: 277 XXXXXXXX-QKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRI 447 K+ P+SLN +S GS+ KRGVVTMVIPF RGSAWEQPPPDLASYLYKNRI Sbjct: 55 CSASSPFSGHKLRPSSLNPASFLGSNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRI 114 Query: 448 VYLGMSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVM 627 VYLGMSLVPSVTELILAEFLYLQYEDD KPIYLYINSTGTTKG EKLGYETEAFAIYDVM Sbjct: 115 VYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM 174 Query: 628 RYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARK 807 RYVKPPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIM++QPIARFQGQATD++LAR+ Sbjct: 175 RYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARR 234 Query: 808 EVKNVKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGI 987 EV NVK ELV LYA+H+ K+PEQIE DI+RPKYFSPSEAVEYGIIDKVIYN+RG+EDRG+ Sbjct: 235 EVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGTEDRGV 294 Query: 988 VSDLKRAQLI 1017 VSDLK+A+LI Sbjct: 295 VSDLKKARLI 304 >gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica] Length = 305 Score = 435 bits (1118), Expect = e-119 Identities = 231/306 (75%), Positives = 253/306 (82%), Gaps = 3/306 (0%) Frame = +1 Query: 109 MEVSTTMSSRFTLNKPTTLSKTHFPNKLSKTNLQPLGKVSV-KSSLTTSFTAPXXXXXXX 285 MEV+TT SS F L+ + T P + T P S+ ++SL+TSF P Sbjct: 1 MEVATTASS-FALHTRMLATPT-IPRARNTTRPHPTSSRSLPRASLSTSFLCPFAGNSLS 58 Query: 286 XXXXXQKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYLG 459 K+ P+SLN +S GS KRGVVTMVI F RGSAWEQPPPDLASYLYKNRIVYLG Sbjct: 59 SEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYLG 118 Query: 460 MSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVMRYVK 639 MSLVPSVTELILAEFLYLQYEDD KPIYLYINSTGTTKG EKLGYETEAFAIYDVMRYVK Sbjct: 119 MSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVK 178 Query: 640 PPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARKEVKN 819 PPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIMMKQPIARFQGQATDI+LAR+EV+N Sbjct: 179 PPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIARFQGQATDIELARREVRN 238 Query: 820 VKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGIVSDL 999 VK ELV L+A+H+GKS EQIE DIRRPKYFSPSEAVEYGIIDKV+YNER +EDRG+VSDL Sbjct: 239 VKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERSTEDRGVVSDL 298 Query: 1000 KRAQLI 1017 K+AQLI Sbjct: 299 KKAQLI 304 >ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like [Cucumis sativus] gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic-like [Cucumis sativus] Length = 304 Score = 430 bits (1106), Expect = e-118 Identities = 225/305 (73%), Positives = 248/305 (81%), Gaps = 2/305 (0%) Frame = +1 Query: 109 MEVSTTMSSRFTLNKPTTLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXXXXXXX 288 MEV+TT SS F L K + T N S L + L+T+F P Sbjct: 1 MEVATTASS-FALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSG 59 Query: 289 XXXXQKMSPASLNT--SSGSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYLGM 462 K+ P+SLN S GS GKRGVVTMVIPF RGSAWEQPPPDLASYLYKNRIVYLGM Sbjct: 60 EFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGM 119 Query: 463 SLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVMRYVKP 642 SLVPSVTELILAEFLYLQYED+ KPIYLY+NSTGTTKG EKLGYETEAFA+YDVM YVKP Sbjct: 120 SLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKP 179 Query: 643 PIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARKEVKNV 822 PIFTLCVGNAWGEAALLLA+GA GNRSALPSSTIM+K+PIARFQGQATD+++ARKEV+NV Sbjct: 180 PIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNV 239 Query: 823 KAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGIVSDLK 1002 KAELV LYA+HIGKS E+IE DIRRPKYFSPSEAVEYGIIDKV+YNER +EDRG+VSDLK Sbjct: 240 KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 299 Query: 1003 RAQLI 1017 +AQLI Sbjct: 300 KAQLI 304 >ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max] gi|255635880|gb|ACU18287.1| unknown [Glycine max] Length = 304 Score = 430 bits (1106), Expect = e-118 Identities = 229/310 (73%), Positives = 257/310 (82%), Gaps = 7/310 (2%) Frame = +1 Query: 109 MEVSTTMSSRFTLNKPT----TLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXXX 276 MEV+TT SS LNKP + S+T P + ++ SV++SL+++F AP Sbjct: 1 MEVATTASS-IALNKPMLALPSSSRTATPIRAMNSSTS-----SVRTSLSSNFVAPYTGI 54 Query: 277 XXXXXXXX-QKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRI 447 K+ +SLN S GS+ KRGVVTMVIPF RGSAWEQPPPDLASYLYKNRI Sbjct: 55 NSAYSLFSGHKLRLSSLNPGSFRGSNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRI 114 Query: 448 VYLGMSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVM 627 VYLGMSLVPSVTELILAEFLYLQYEDD KPIYLYINSTGTTKG EKLGYETEAFAIYDVM Sbjct: 115 VYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM 174 Query: 628 RYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARK 807 RYVKPPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIM++QPIARFQGQATD++LAR+ Sbjct: 175 RYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARR 234 Query: 808 EVKNVKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGI 987 EV NVK ELV LYA+H+ K+PEQIE DI+RPKYFSPSEAVEYGIIDKVIYN+RGSEDRG+ Sbjct: 235 EVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGSEDRGV 294 Query: 988 VSDLKRAQLI 1017 VSDLK+A+LI Sbjct: 295 VSDLKKARLI 304 >ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|118483146|gb|ABK93479.1| unknown [Populus trichocarpa] gi|222870265|gb|EEF07396.1| predicted protein [Populus trichocarpa] Length = 310 Score = 427 bits (1097), Expect = e-117 Identities = 221/310 (71%), Positives = 249/310 (80%), Gaps = 7/310 (2%) Frame = +1 Query: 109 MEVSTTMSSRFTLNK-----PTTLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXX 273 M V+T +S F +K PT S+ PN+ + P S ++SL+T F +P Sbjct: 1 MAVATATASSFGFHKRMLASPTVSSRIINPNRTLALSSSPSTSSSSRASLSTCFLSPFAG 60 Query: 274 XXXXXXXXXQKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRI 447 K+ P LN +S S GKR VVTMVIP+ RGSAWEQPPPDLASYL+KNRI Sbjct: 61 GSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNRI 120 Query: 448 VYLGMSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVM 627 VYLGMSLVPSVTELILAEFLYLQYED++KPIYLYINSTGTTKG EKLGYETEAFAIYDVM Sbjct: 121 VYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM 180 Query: 628 RYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARK 807 YVKPPIFTLCVGNAWGEAALLLA+G++GNRSALPSSTIMMKQPI RFQGQATD++LARK Sbjct: 181 GYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQPIGRFQGQATDVELARK 240 Query: 808 EVKNVKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGI 987 E+KNVK ELVNL A+HIGK PE+IE DI RPKYFSP+EAVEYGIIDKVIYNER +EDRG+ Sbjct: 241 EIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVEYGIIDKVIYNERTTEDRGV 300 Query: 988 VSDLKRAQLI 1017 VSDLK+AQLI Sbjct: 301 VSDLKKAQLI 310