BLASTX nr result

ID: Coptis24_contig00008941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008941
         (3699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...  1475   0.0  
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...  1462   0.0  
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor...  1436   0.0  
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...  1434   0.0  
ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre...  1432   0.0  

>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score = 1475 bits (3818), Expect = 0.0
 Identities = 725/861 (84%), Positives = 795/861 (92%)
 Frame = +1

Query: 745  KDAAATRKLTEPKLSKKEQEEAIRRSNAVDQNDRQTLRKVSRQEYLKKREVKKLEEIRDD 924
            +DAA TRKLTE KLS+KE+EEAIRRSNA++++D   LRKVSRQEYLKKRE KKLEE+RDD
Sbjct: 196  RDAAGTRKLTEQKLSRKEEEEAIRRSNAMEEDDISALRKVSRQEYLKKREQKKLEELRDD 255

Query: 925  IEDEQYLFDGVKLTEAEYRELRYKREIYDLAKKRSEDVDDINEYRMPEAYDQDGVVNQEK 1104
            IEDEQYLFDGVKLTEAE RELRYKREIYDL KKRSE+ DDINEYRMP+AYDQ+G VNQEK
Sbjct: 256  IEDEQYLFDGVKLTEAEQRELRYKREIYDLVKKRSEETDDINEYRMPDAYDQEGGVNQEK 315

Query: 1105 RFAAAMQRYRDPNSGEKMNPFAEQEAWEEHQIGKATLKYGSKNKKQTTDDYQYVFEDQIE 1284
            RF+ A+QRYRD ++ +KMNPFAEQEAWEEHQIGKATLK+GSK+K Q +DDYQ VFEDQIE
Sbjct: 316  RFSVALQRYRDSSANDKMNPFAEQEAWEEHQIGKATLKFGSKDKNQKSDDYQLVFEDQIE 375

Query: 1285 FITASVMDGDKREELTNAPPVNNSGDKSAEQKLQDDRKTLPIYPYREELLQAIHEHQVIV 1464
            FI ASVMDGDK E+   A   ++S  KS  +KLQ+DRK LPIYPYR+ELL+A+ +HQ++V
Sbjct: 376  FIKASVMDGDKFEDGLFAESHDDSVAKSELEKLQEDRKMLPIYPYRDELLKAVDDHQILV 435

Query: 1465 IIGETGSGKTTQIPQYLHEAGYTKRGMIGCTQPRRVAAMSVSARVSQEMGVKLGHEVGYS 1644
            I+GETGSGKTTQIPQYLHE+GYTKRG +GCTQPRRVAAMSV+ARVSQEMGVKLGHEVGYS
Sbjct: 436  IVGETGSGKTTQIPQYLHESGYTKRGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYS 495

Query: 1645 IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDVA 1824
            IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKD+A
Sbjct: 496  IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDIA 555

Query: 1825 RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAAIVTVL 2004
            RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRR+PVEIHYTKAPEADYLDAAIVT L
Sbjct: 556  RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHYTKAPEADYLDAAIVTAL 615

Query: 2005 QIHVTQPPGDILVFFTGQEEIETAEEVLRHRTRGLGTKIAELIICPIYANLPTELQAKIF 2184
            QIHVTQPPGDILVF TGQEEIETAEE+++HRTRGLGTKIAELIICPIYANLPTELQA IF
Sbjct: 616  QIHVTQPPGDILVFLTGQEEIETAEEIMKHRTRGLGTKIAELIICPIYANLPTELQANIF 675

Query: 2185 EPTPEGARKVVLATNIAETSLTIDGISYVVDPGFCKMKSYNPRTGMESLLVNPVSKASAD 2364
            EPTPEGARKVVLATNIAETSLTIDGI YV+DPGFCKMKSYNPRTGMESLLVNP+SKASA 
Sbjct: 676  EPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVNPISKASAM 735

Query: 2365 QRAGRSGRTGPGKCFRLFTAYNFQNDLDANTVPEIQRTNLANVVLTLKSLGIHDLLSFDF 2544
            QRAGRSGRTGPGKCFRL+TAYN+ NDL+ NTVPEIQRTNLANVVL+LKSLGIHDLL+FDF
Sbjct: 736  QRAGRSGRTGPGKCFRLYTAYNYYNDLEDNTVPEIQRTNLANVVLSLKSLGIHDLLNFDF 795

Query: 2545 MDPPPXXXXXXXXXXXXXXXXXXXVGELTKMGRRMAEFPLDPMLSKMIVASEKYKCSEEI 2724
            MDPPP                   +GELTK+GRRMAEFPLDPMLSKMIVA++ YKCS+EI
Sbjct: 796  MDPPPAEALLKALELLYALSALNRLGELTKVGRRMAEFPLDPMLSKMIVAADNYKCSDEI 855

Query: 2725 ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYDSWKETNFNTQWCY 2904
            ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVY SWKETN++TQWCY
Sbjct: 856  ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNYSTQWCY 915

Query: 2905 ENYIQVRSMKRARDIRDQLEGLLERVEIEASSNPNELDAIKKAITSGFFHHSARLQKSGA 3084
            ENYIQVRSMKRARD+RDQLEGLLERVEIE +SNPN+LDAIKK+IT+GFF HSARLQK+G+
Sbjct: 916  ENYIQVRSMKRARDVRDQLEGLLERVEIELASNPNDLDAIKKSITAGFFPHSARLQKNGS 975

Query: 3085 YKTVKNPQTVHMHPTSGLAQVLPRWVVYHELVLTTKEYMRQITELKPEWLVEIAPHYYQL 3264
            Y+TVK+PQTVH+HP+SGLAQVLPRWV+YHELVLTTKEYMRQ+TELKPEWLVEIAPH+YQL
Sbjct: 976  YRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLTTKEYMRQVTELKPEWLVEIAPHFYQL 1035

Query: 3265 KDVEDAAAKKLPRGQGRASMD 3327
            KDVED  +KK+PR +GRA  D
Sbjct: 1036 KDVEDPGSKKMPRTEGRAVKD 1056



 Score =  140 bits (354), Expect = 2e-30
 Identities = 67/106 (63%), Positives = 89/106 (83%)
 Frame = +3

Query: 168 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 347
           M  +  LK WVSDKLMSLLGYSQPTLVQ+V+ LAK+ +SPA+V  KLVE GL +S+ETRS
Sbjct: 1   MGSESNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETRS 60

Query: 348 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 485
           FA+E+F++VP K++ L+ YQ++EREAAMLV+KQ+TY +L+A D +E
Sbjct: 61  FAEEIFSKVPHKASGLNVYQKQEREAAMLVRKQKTYAILDADDSDE 106


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score = 1462 bits (3784), Expect = 0.0
 Identities = 721/859 (83%), Positives = 790/859 (91%)
 Frame = +1

Query: 745  KDAAATRKLTEPKLSKKEQEEAIRRSNAVDQNDRQTLRKVSRQEYLKKREVKKLEEIRDD 924
            +DAA TRKLTE KL++KE+EEAIRRS A +Q+D Q+LRKVSRQEYLKKRE KKLEE+RDD
Sbjct: 186  RDAAGTRKLTEQKLTRKEEEEAIRRSKAAEQDDIQSLRKVSRQEYLKKREEKKLEELRDD 245

Query: 925  IEDEQYLFDGVKLTEAEYRELRYKREIYDLAKKRSEDVDDINEYRMPEAYDQDGVVNQEK 1104
            IEDEQYLF+GVKL+EAEYRELRYK+EIY+L KKRSE+ D+ NEYRMPEAYDQ+G VNQEK
Sbjct: 246  IEDEQYLFEGVKLSEAEYRELRYKKEIYELVKKRSEEADNANEYRMPEAYDQEGGVNQEK 305

Query: 1105 RFAAAMQRYRDPNSGEKMNPFAEQEAWEEHQIGKATLKYGSKNKKQTTDDYQYVFEDQIE 1284
            RF+ AMQRYRD N+ +KMNPFAEQEAWEEHQIGKATLK+GSKNKKQ +DDYQYVFEDQI+
Sbjct: 306  RFSVAMQRYRDLNAEDKMNPFAEQEAWEEHQIGKATLKFGSKNKKQVSDDYQYVFEDQID 365

Query: 1285 FITASVMDGDKREELTNAPPVNNSGDKSAEQKLQDDRKTLPIYPYREELLQAIHEHQVIV 1464
            FI ASVM+GDK +          S  KSA + LQ++RK LP++PYR+ELL+A+H HQV+V
Sbjct: 366  FIKASVMEGDKFDYEEMEDSHEKSKAKSAFEALQEERKKLPMFPYRDELLEAVHNHQVLV 425

Query: 1465 IIGETGSGKTTQIPQYLHEAGYTKRGMIGCTQPRRVAAMSVSARVSQEMGVKLGHEVGYS 1644
            I+GETGSGKTTQIPQYLHEAGYTKRGMI CTQPRRVAAMSV+ARVSQEMGVKLGHEVGYS
Sbjct: 426  IVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHEVGYS 485

Query: 1645 IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDVA 1824
            IRFEDCTSEKT+LKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKD+A
Sbjct: 486  IRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDIA 545

Query: 1825 RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAAIVTVL 2004
            RFRPDLKLLISSATLDAEKFSDYFDSAPIF+IPGRR+PVEI YTKAPEADYLDAAIVT L
Sbjct: 546  RFRPDLKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEISYTKAPEADYLDAAIVTSL 605

Query: 2005 QIHVTQPPGDILVFFTGQEEIETAEEVLRHRTRGLGTKIAELIICPIYANLPTELQAKIF 2184
            QIHVTQPPGDILVF TGQEEIETAEE+L+HRTRGLGTKI+ELIICPIYANLPTELQAKIF
Sbjct: 606  QIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKISELIICPIYANLPTELQAKIF 665

Query: 2185 EPTPEGARKVVLATNIAETSLTIDGISYVVDPGFCKMKSYNPRTGMESLLVNPVSKASAD 2364
            EPTPEGARKVVLATNIAETSLTIDGI YV+DPGFCKMKSYNPRTGMESLLV P+SKASA+
Sbjct: 666  EPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASAN 725

Query: 2365 QRAGRSGRTGPGKCFRLFTAYNFQNDLDANTVPEIQRTNLANVVLTLKSLGIHDLLSFDF 2544
            QRAGRSGRTGPGKCFRL+TAYN+ NDLD NTVPEIQRTNLANVVLTLKSLGIHDLL+FDF
Sbjct: 726  QRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLNFDF 785

Query: 2545 MDPPPXXXXXXXXXXXXXXXXXXXVGELTKMGRRMAEFPLDPMLSKMIVASEKYKCSEEI 2724
            MDPPP                   +GELTK+GRRMAEFPLDPMLSKMIVASE YKCS++I
Sbjct: 786  MDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASENYKCSDDI 845

Query: 2725 ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYDSWKETNFNTQWCY 2904
            ISIAAMLSVGNSIFYRPKDKQVHADNAR+NFHTGNVGDH+ALLKVY+SWKETN++TQWCY
Sbjct: 846  ISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHMALLKVYNSWKETNYSTQWCY 905

Query: 2905 ENYIQVRSMKRARDIRDQLEGLLERVEIEASSNPNELDAIKKAITSGFFHHSARLQKSGA 3084
            ENYIQVRSMKRARDIRDQL GLLERVEIE +SN N+LDAIKK+ITSGFF HSARLQK+G+
Sbjct: 906  ENYIQVRSMKRARDIRDQLAGLLERVEIELTSNANDLDAIKKSITSGFFPHSARLQKNGS 965

Query: 3085 YKTVKNPQTVHMHPTSGLAQVLPRWVVYHELVLTTKEYMRQITELKPEWLVEIAPHYYQL 3264
            Y+TVK+ QTVH+HP+SGLAQVLPRWVVYHELVLTTKEYMRQ+TELKPEWLVEIAPHYYQL
Sbjct: 966  YRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 1025

Query: 3265 KDVEDAAAKKLPRGQGRAS 3321
            KDVED+ +KK+PRG G  S
Sbjct: 1026 KDVEDSYSKKMPRGAGLPS 1044



 Score =  131 bits (329), Expect = 2e-27
 Identities = 62/106 (58%), Positives = 87/106 (82%)
 Frame = +3

Query: 168 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 347
           M  D  LKTWVSDKLMSLLGYSQPT+VQ++I L+K+  SPA++  KLVE G+ SS +T +
Sbjct: 1   MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHA 59

Query: 348 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 485
           FA+E+++RVPR+S+ ++ YQ++EREAAML +KQ+TY +L+A DD +
Sbjct: 60  FAEEIYSRVPRRSSGINQYQKQEREAAMLARKQKTYSILKADDDSD 105


>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Cucumis sativus]
          Length = 1055

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 698/859 (81%), Positives = 793/859 (92%)
 Frame = +1

Query: 745  KDAAATRKLTEPKLSKKEQEEAIRRSNAVDQNDRQTLRKVSRQEYLKKREVKKLEEIRDD 924
            +DAA T+KLTE KLS+KE+EEAIRRS A++ +   TLRKVSRQEYLKKRE KKLEEIRDD
Sbjct: 190  RDAAGTKKLTEQKLSRKEEEEAIRRSEALENDGIDTLRKVSRQEYLKKREEKKLEEIRDD 249

Query: 925  IEDEQYLFDGVKLTEAEYRELRYKREIYDLAKKRSEDVDDINEYRMPEAYDQDGVVNQEK 1104
            IEDEQYLF+GVKLT+AEYREL+YK+EIY+L KKR+++ DDINEYRMPEAYDQ+G VNQ+K
Sbjct: 250  IEDEQYLFEGVKLTDAEYRELKYKKEIYELVKKRTDEADDINEYRMPEAYDQEGGVNQDK 309

Query: 1105 RFAAAMQRYRDPNSGEKMNPFAEQEAWEEHQIGKATLKYGSKNKKQTTDDYQYVFEDQIE 1284
            RFA AMQRYRD  + +KMNPFAEQEAWEEHQIGKAT+K+GSKNKKQ++DDYQ+VFEDQIE
Sbjct: 310  RFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSSDDYQFVFEDQIE 369

Query: 1285 FITASVMDGDKREELTNAPPVNNSGDKSAEQKLQDDRKTLPIYPYREELLQAIHEHQVIV 1464
            FI ASVM+GD+  +      +  S  +SA +KLQ++RKTLPIYPYR++LLQA++++QV+V
Sbjct: 370  FIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLV 429

Query: 1465 IIGETGSGKTTQIPQYLHEAGYTKRGMIGCTQPRRVAAMSVSARVSQEMGVKLGHEVGYS 1644
            I+GETGSGKTTQIPQYLHEAGYTKRG +GCTQPRRVAAMS++ARVSQE+GVKLGHEVGYS
Sbjct: 430  IVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYS 489

Query: 1645 IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDVA 1824
            IRFEDCTS+KTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTD+LFGLVKD+A
Sbjct: 490  IRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIA 549

Query: 1825 RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAAIVTVL 2004
            RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRR+PVEI++TKAPEADYLDAAIVT L
Sbjct: 550  RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTAL 609

Query: 2005 QIHVTQPPGDILVFFTGQEEIETAEEVLRHRTRGLGTKIAELIICPIYANLPTELQAKIF 2184
            QIHVT+PPGDILVF TGQEEIE AEE+++HRTRGLGTKIAELIICPIYANLPTELQAKIF
Sbjct: 610  QIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIF 669

Query: 2185 EPTPEGARKVVLATNIAETSLTIDGISYVVDPGFCKMKSYNPRTGMESLLVNPVSKASAD 2364
            EPTP+GARKVVLATNIAETSLTIDGI YV+DPGF K+KSYNPRTGME+L V+P+SKASA+
Sbjct: 670  EPTPDGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASAN 729

Query: 2365 QRAGRSGRTGPGKCFRLFTAYNFQNDLDANTVPEIQRTNLANVVLTLKSLGIHDLLSFDF 2544
            QRAGRSGRTGPG CFRL+TAY++ N+++ NTVPEIQRTNLANVVLTLKSLGIHDL++FDF
Sbjct: 730  QRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDF 789

Query: 2545 MDPPPXXXXXXXXXXXXXXXXXXXVGELTKMGRRMAEFPLDPMLSKMIVASEKYKCSEEI 2724
            MD PP                   +GELTK+GRRMAEFPLDPMLSKM+VASEK+KCS+EI
Sbjct: 790  MDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEI 849

Query: 2725 ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYDSWKETNFNTQWCY 2904
            ISIAAMLS+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVY+SW+ETN++TQWCY
Sbjct: 850  ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCY 909

Query: 2905 ENYIQVRSMKRARDIRDQLEGLLERVEIEASSNPNELDAIKKAITSGFFHHSARLQKSGA 3084
            ENYIQVRSMKRARDIRDQLEGLLERVEIE +SN N+LDAIKK I SG+F HSA+LQK+G+
Sbjct: 910  ENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGS 969

Query: 3085 YKTVKNPQTVHMHPTSGLAQVLPRWVVYHELVLTTKEYMRQITELKPEWLVEIAPHYYQL 3264
            Y+TVK+PQTVH+HP+SGLAQVLPRWVVYHELV T+KEYMRQ+TELKPEWLVEIAPH+YQL
Sbjct: 970  YRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQL 1029

Query: 3265 KDVEDAAAKKLPRGQGRAS 3321
            KDVED ++KK+PRGQGRAS
Sbjct: 1030 KDVEDLSSKKMPRGQGRAS 1048



 Score =  123 bits (308), Expect = 4e-25
 Identities = 62/108 (57%), Positives = 87/108 (80%), Gaps = 2/108 (1%)
 Frame = +3

Query: 168 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLV-ESGLPSSTETR 344
           M  + +LKTWVSD+LMSLLG+SQPT+VQ++I L+K+  SPA+V  KLV +  LPSS ET 
Sbjct: 1   MGGENDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETL 60

Query: 345 SFAKEVFTRVPRK-SADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 485
           +FA+ +F+RVPRK S+ L+ YQ++EREAAML +KQ TY +L+A D+++
Sbjct: 61  AFAEGIFSRVPRKQSSGLNLYQKQEREAAMLARKQTTYALLDADDEDD 108


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score = 1434 bits (3713), Expect = 0.0
 Identities = 712/859 (82%), Positives = 781/859 (90%)
 Frame = +1

Query: 745  KDAAATRKLTEPKLSKKEQEEAIRRSNAVDQNDRQTLRKVSRQEYLKKREVKKLEEIRDD 924
            +DAA TRKLTE KL++KE+EEAIRRS A +Q+D Q+LRKVSRQEYLKKRE KKLEE+RDD
Sbjct: 186  RDAAGTRKLTEQKLTRKEEEEAIRRSKAAEQDDIQSLRKVSRQEYLKKREEKKLEELRDD 245

Query: 925  IEDEQYLFDGVKLTEAEYRELRYKREIYDLAKKRSEDVDDINEYRMPEAYDQDGVVNQEK 1104
            IEDEQYLF+GVKL+EAEYRELRYK+EIY+L KKRSE+ D+ NE         +G VNQEK
Sbjct: 246  IEDEQYLFEGVKLSEAEYRELRYKKEIYELVKKRSEEADNANE---------EGGVNQEK 296

Query: 1105 RFAAAMQRYRDPNSGEKMNPFAEQEAWEEHQIGKATLKYGSKNKKQTTDDYQYVFEDQIE 1284
            RF+ AMQRYRD N+ +KMNPFAEQEAWEEHQIGKATLK+GSKNKKQ +DDYQYVFEDQI+
Sbjct: 297  RFSVAMQRYRDLNAEDKMNPFAEQEAWEEHQIGKATLKFGSKNKKQVSDDYQYVFEDQID 356

Query: 1285 FITASVMDGDKREELTNAPPVNNSGDKSAEQKLQDDRKTLPIYPYREELLQAIHEHQVIV 1464
            FI ASVM+GDK +          S  KSA + LQ++RK LP++PYR+ELL+A+H HQV+V
Sbjct: 357  FIKASVMEGDKFDYEEMEDSHEKSKAKSAFEALQEERKKLPMFPYRDELLEAVHNHQVLV 416

Query: 1465 IIGETGSGKTTQIPQYLHEAGYTKRGMIGCTQPRRVAAMSVSARVSQEMGVKLGHEVGYS 1644
            I+GETGSGKTTQIPQYLHEAGYTKRGMI CTQPRRVAAMSV+ARVSQEMGVKLGHEVGYS
Sbjct: 417  IVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHEVGYS 476

Query: 1645 IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDVA 1824
            IRFEDCTSEKT+LKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKD+A
Sbjct: 477  IRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDIA 536

Query: 1825 RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAAIVTVL 2004
            RFRPDLKLLISSATLDAEKFSDYFDSAPIF+IPGRR+PVEI YTKAPEADYLDAAIVT L
Sbjct: 537  RFRPDLKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEISYTKAPEADYLDAAIVTSL 596

Query: 2005 QIHVTQPPGDILVFFTGQEEIETAEEVLRHRTRGLGTKIAELIICPIYANLPTELQAKIF 2184
            QIHVTQPPGDILVF TGQEEIETAEE+L+HRTRGLGTKI+ELIICPIYANLPTELQAKIF
Sbjct: 597  QIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKISELIICPIYANLPTELQAKIF 656

Query: 2185 EPTPEGARKVVLATNIAETSLTIDGISYVVDPGFCKMKSYNPRTGMESLLVNPVSKASAD 2364
            EPTPEGARKVVLATNIAETSLTIDGI YV+DPGFCKMKSYNPRTGMESLLV P+SKASA+
Sbjct: 657  EPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASAN 716

Query: 2365 QRAGRSGRTGPGKCFRLFTAYNFQNDLDANTVPEIQRTNLANVVLTLKSLGIHDLLSFDF 2544
            QRAGRSGRTGPGKCFRL+TAYN+ NDLD NTVPEIQRTNLANVVLTLKSLGIHDLL+FDF
Sbjct: 717  QRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLNFDF 776

Query: 2545 MDPPPXXXXXXXXXXXXXXXXXXXVGELTKMGRRMAEFPLDPMLSKMIVASEKYKCSEEI 2724
            MDPPP                   +GELTK+GRRMAEFPLDPMLSKMIVASE YKCS++I
Sbjct: 777  MDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASENYKCSDDI 836

Query: 2725 ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYDSWKETNFNTQWCY 2904
            ISIAAMLSVGNSIFYRPKDKQVHADNAR+NFHTGNVGDH+ALLKVY+SWKETN++TQWCY
Sbjct: 837  ISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHMALLKVYNSWKETNYSTQWCY 896

Query: 2905 ENYIQVRSMKRARDIRDQLEGLLERVEIEASSNPNELDAIKKAITSGFFHHSARLQKSGA 3084
            ENYIQVRSMKRARDIRDQL GLLERVEIE +SN N+LDAIKK+ITSGFF HSARLQK+G+
Sbjct: 897  ENYIQVRSMKRARDIRDQLAGLLERVEIELTSNANDLDAIKKSITSGFFPHSARLQKNGS 956

Query: 3085 YKTVKNPQTVHMHPTSGLAQVLPRWVVYHELVLTTKEYMRQITELKPEWLVEIAPHYYQL 3264
            Y+TVK+ QTVH+HP+SGLAQVLPRWVVYHELVLTTKEYMRQ+TELKPEWLVEIAPHYYQL
Sbjct: 957  YRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 1016

Query: 3265 KDVEDAAAKKLPRGQGRAS 3321
            KDVED+ +KK+PRG G  S
Sbjct: 1017 KDVEDSYSKKMPRGAGLPS 1035



 Score =  131 bits (329), Expect = 2e-27
 Identities = 62/106 (58%), Positives = 87/106 (82%)
 Frame = +3

Query: 168 MAEDRELKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLVESGLPSSTETRS 347
           M  D  LKTWVSDKLMSLLGYSQPT+VQ++I L+K+  SPA++  KLVE G+ SS +T +
Sbjct: 1   MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGI-SSMDTHA 59

Query: 348 FAKEVFTRVPRKSADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 485
           FA+E+++RVPR+S+ ++ YQ++EREAAML +KQ+TY +L+A DD +
Sbjct: 60  FAEEIYSRVPRRSSGINQYQKQEREAAMLARKQKTYSILKADDDSD 105


>ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
            ATP-dependent RNA helicase DHX16-like, partial [Cucumis
            sativus]
          Length = 1049

 Score = 1432 bits (3708), Expect = 0.0
 Identities = 696/859 (81%), Positives = 792/859 (92%)
 Frame = +1

Query: 745  KDAAATRKLTEPKLSKKEQEEAIRRSNAVDQNDRQTLRKVSRQEYLKKREVKKLEEIRDD 924
            +DAA T+KLTE KLS+KE+EEAIRRS A++ +   TLRKVSRQEYLKKRE KKLEEIRDD
Sbjct: 184  RDAAGTKKLTEQKLSRKEEEEAIRRSEALENDGIDTLRKVSRQEYLKKREEKKLEEIRDD 243

Query: 925  IEDEQYLFDGVKLTEAEYRELRYKREIYDLAKKRSEDVDDINEYRMPEAYDQDGVVNQEK 1104
            IEDEQYLF+GVKLT+AEYREL+YK+EIY+L KKR+++ DDINEYRMPEAYDQ+G VNQ+K
Sbjct: 244  IEDEQYLFEGVKLTDAEYRELKYKKEIYELVKKRTDEADDINEYRMPEAYDQEGGVNQDK 303

Query: 1105 RFAAAMQRYRDPNSGEKMNPFAEQEAWEEHQIGKATLKYGSKNKKQTTDDYQYVFEDQIE 1284
            RFA AMQRYRD  + +KMNPFAEQEAWEEHQIGKAT+K+GSKNKKQ++DDYQ+VFEDQIE
Sbjct: 304  RFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSSDDYQFVFEDQIE 363

Query: 1285 FITASVMDGDKREELTNAPPVNNSGDKSAEQKLQDDRKTLPIYPYREELLQAIHEHQVIV 1464
            FI ASVM+GD+  +      +  S  +SA +KLQ++RKTLPIYPYR++LLQA++++QV+V
Sbjct: 364  FIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLV 423

Query: 1465 IIGETGSGKTTQIPQYLHEAGYTKRGMIGCTQPRRVAAMSVSARVSQEMGVKLGHEVGYS 1644
            I+GE GSGKTTQIPQYLHEAGYTK+G +GCTQPRRVAAMS++ARVSQE+GVKLGHEVGYS
Sbjct: 424  IVGEAGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYS 483

Query: 1645 IRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDVA 1824
            IRFEDCTS+KTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTD+LFGLVKD+A
Sbjct: 484  IRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIA 543

Query: 1825 RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAAIVTVL 2004
            RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRR+PVEI++TKAPEADYLDAAIVT L
Sbjct: 544  RFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTAL 603

Query: 2005 QIHVTQPPGDILVFFTGQEEIETAEEVLRHRTRGLGTKIAELIICPIYANLPTELQAKIF 2184
            QIHVT+PPGDILVF TGQEEIE AEE+++HRTRGLGTKIAELIICPIYANLPTELQAKIF
Sbjct: 604  QIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIF 663

Query: 2185 EPTPEGARKVVLATNIAETSLTIDGISYVVDPGFCKMKSYNPRTGMESLLVNPVSKASAD 2364
            EPTP+GARKVVLATNIAETSLTIDGI YV+DPGF K+KSYNPRTGME+L V+P+SKASA+
Sbjct: 664  EPTPDGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASAN 723

Query: 2365 QRAGRSGRTGPGKCFRLFTAYNFQNDLDANTVPEIQRTNLANVVLTLKSLGIHDLLSFDF 2544
            QRAGRSGRTGPG CFRL+TAY++ N+++ NTVPEIQRTNLANVVLTLKSLGIHDL++FDF
Sbjct: 724  QRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDF 783

Query: 2545 MDPPPXXXXXXXXXXXXXXXXXXXVGELTKMGRRMAEFPLDPMLSKMIVASEKYKCSEEI 2724
            MD PP                   +GELTK+GRRMAEFPLDPMLSKM+VASEK+KCS+EI
Sbjct: 784  MDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEI 843

Query: 2725 ISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYDSWKETNFNTQWCY 2904
            ISIAAMLS+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVY+SW+ETN++TQWCY
Sbjct: 844  ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCY 903

Query: 2905 ENYIQVRSMKRARDIRDQLEGLLERVEIEASSNPNELDAIKKAITSGFFHHSARLQKSGA 3084
            ENYIQVRSMKRARDIRDQLEGLLERVEIE +SN N+LDAIKK I SG+F HSA+LQK+G+
Sbjct: 904  ENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGS 963

Query: 3085 YKTVKNPQTVHMHPTSGLAQVLPRWVVYHELVLTTKEYMRQITELKPEWLVEIAPHYYQL 3264
            Y+TVK+PQTVH+HP+SGLAQVLPRWVVYHELV T+KEYMRQ+TELKPEWLVEIAPH+YQL
Sbjct: 964  YRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQL 1023

Query: 3265 KDVEDAAAKKLPRGQGRAS 3321
            KDVED ++KK+PRGQGRAS
Sbjct: 1024 KDVEDLSSKKMPRGQGRAS 1042



 Score =  117 bits (293), Expect = 2e-23
 Identities = 60/102 (58%), Positives = 83/102 (81%), Gaps = 2/102 (1%)
 Frame = +3

Query: 186 LKTWVSDKLMSLLGYSQPTLVQFVIRLAKEGASPANVAEKLV-ESGLPSSTETRSFAKEV 362
           L+TWVSD+LMSLLG SQPT+VQ++I L+K+  SPA+V  KLV +  LPSS ET +FA+ +
Sbjct: 1   LETWVSDQLMSLLGXSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETLAFAEGI 60

Query: 363 FTRVPRK-SADLSSYQREEREAAMLVKKQRTYQMLEASDDEE 485
           F+RVPRK S+ L+ YQ++EREAAML +KQ TY +L+A D+++
Sbjct: 61  FSRVPRKQSSGLNLYQKQEREAAMLARKQTTYALLDADDEDD 102


Top