BLASTX nr result
ID: Coptis24_contig00008940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008940
(1480 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm... 139 2e-30
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit... 124 6e-26
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23... 124 8e-26
ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23... 113 1e-22
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2... 92 5e-16
>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
gi|223538985|gb|EEF40582.1| conserved hypothetical
protein [Ricinus communis]
Length = 413
Score = 139 bits (349), Expect = 2e-30
Identities = 105/384 (27%), Positives = 176/384 (45%), Gaps = 50/384 (13%)
Frame = +2
Query: 80 SMAKSTDEDQEKQEDMKIKKPITPHLSDDVMIKILTRLRAKELNQIRYVCKQWNNIIRDP 259
+++K +++Q KQ P+ D + IL RL + L R+VCK W +II
Sbjct: 20 ALSKKVEDEQNKQH--------VPYFHKDCISNILIRLPLQSLQSSRFVCKLWYSIINSS 71
Query: 260 YFIKQHSLNSEYGVIVQISPGDD------------------------------------- 328
FI H SE V++ + P +
Sbjct: 72 IFIDAHLRRSE-SVLIYVKPVPNKRYSATSKPPEESNNFSVEASFLQSNSGSIFAEPIMN 130
Query: 329 ------VRFINMKGGN--IYEYNIDTILKGGIVATCDGLVLLQLDGLWSLKFYIINLTTR 484
++F+ K GN I EYN++ + G I ATC+GL+LL + L ++N TR
Sbjct: 131 SAPKFCIQFVEFKEGNMKIGEYNVNCL--GNIRATCNGLILLD-NKLKKGGLIVMNPVTR 187
Query: 485 ENLELPLCS-ERPGRESYAIDYIPSRNEYKVARLLGGEEGDSKWDLACEVLIVNGCDKLQ 661
+ + LPL + P ESY + EYKV L E G ++CE L +
Sbjct: 188 KLIALPLGTIYSPQDESYGFALSDTTGEYKVVHLFRDELGY----VSCETLNLRA---RF 240
Query: 662 WKSIDAPDVDMTKCFGYRPISVNGVVYWVEYPRH--MVLCLDLSDDKFHQTPLPKISLSK 835
WK ++ P + + FGYRP++ G ++W+ H ++ +++ ++KFH PLPK
Sbjct: 241 WKEVNGPSFGLFRWFGYRPVAALGALHWIPQVDHNDYLVSMEVDNEKFHSVPLPKSCRIH 300
Query: 836 GGFIGMGNYLSFLKYTAPEDLDVWVLKDFCKGEWVKQQTISVRSKIIECMPICSFENGDV 1015
I MG L F+ + ++D+W L+ W KQ +I+ R II+ +PICS G
Sbjct: 301 DRIIEMGGLLCFVTH-EELNIDIWNLRSLSGDVWTKQYSIT-RGSIIDMVPICSLRIGGE 358
Query: 1016 IVFRKRK--TLWAYNAKLQMWTKL 1081
++F++ + + ++Y+ +L+ K+
Sbjct: 359 LIFKRDEDGSFYSYDCRLKEMRKV 382
>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
Length = 417
Score = 124 bits (311), Expect = 6e-26
Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 56/381 (14%)
Frame = +2
Query: 107 QEKQEDMKIKKPITPHLSDDVMIKILTRLRAKELNQIRYVCKQWNNIIRDPYFIKQHSLN 286
+E+ K+++ P+L D IL RL + L R VCK W +I P FI H
Sbjct: 18 EERALSKKVEEKQVPYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAHLRR 77
Query: 287 SEYGVIVQISP------------------------------------------------G 322
SE V++ ++P
Sbjct: 78 SEV-VLIFLTPIVKQETYLYPFSTRSISQEKPNTFSVEVNLLQLESTPLFHQPVIDPRRK 136
Query: 323 DDVRFINMKGGN--IYEYNIDTILKGGIVATCDGLVLLQLDGLWSLKFYIINLTTRENLE 496
++F+ +K G I E+NI + G I A+ +GL+LL+ + L + ++N TR+ E
Sbjct: 137 SYIQFMEIKDGKSKIGEFNISCM--GEITASFNGLILLE-NKLKRGRLVVMNPVTRKLTE 193
Query: 497 LPLCS-ERPGRESYAIDYIPSRNEYKVARLLGGEEGDSKWDLACEVLIVNGCDKLQWKSI 673
LPL + +P +ESY S +EYKV L D + CE+L V W+ +
Sbjct: 194 LPLGTLSQPHQESYGFALSYSTSEYKVVHLFH----DELRYINCEILNVG---TRTWRPV 246
Query: 674 DAPDVDMTKCFGYRPISVNGVVYWVEY--PRHMVLCLDLSDDKFHQTPLPKISLSKGGFI 847
+ P + FGY+P+S G ++WV + ++ L L ++KFH LPK + G +
Sbjct: 247 NGPSFGLISWFGYKPVSAMGALHWVPHINDNDYIVSLHLENEKFHTVQLPKSYRTHDGIV 306
Query: 848 GMGNYLSFLKYTAPE-DLDVWVLKDFCKGEWVKQQTISVRSKIIECMPICSFENGDVIVF 1024
MG L F+ + + +W LK W KQ I+ I++ +P+ S + +VF
Sbjct: 307 EMGGSLCFVSHDEEMLQIGIWSLKGLSGEGWTKQHCITT-GCILDMVPLFSMRTTEEMVF 365
Query: 1025 RKRK--TLWAYNAKLQMWTKL 1081
++ + +L+AY+ +LQ+ K+
Sbjct: 366 KRDEDGSLYAYDFQLQVMRKI 386
>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
sativus]
Length = 401
Score = 124 bits (310), Expect = 8e-26
Identities = 105/413 (25%), Positives = 184/413 (44%), Gaps = 64/413 (15%)
Frame = +2
Query: 86 AKSTDEDQEKQEDMKIKKPITPHLSDDVMIKILTRLRAKELNQIRYVCKQWNNIIRDPYF 265
AK ++ + +E K ++ + P++ +D + IL RL L++ +VCK W NII P F
Sbjct: 5 AKKSELVRNVEEKRKQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFNIICSPTF 64
Query: 266 IKQHSLNSEYGVIV-------------------------------------------QIS 316
++ H SE +I +
Sbjct: 65 VETHFHRSESVLIFTAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESLSLFHNLE 124
Query: 317 PGDD--VRFINMKGG--NIYEYNIDTILKGGIVATCDGLVLL----QLDGLWSLKFYIIN 472
P ++F+ + G N+ EY++ G I ATC+GL+LL ++ GL +IN
Sbjct: 125 PTSKRFIQFLEFQDGISNVGEYSLSCF--GQIRATCNGLILLDNKLKIGGL-----IVIN 177
Query: 473 LTTRENLELPLCSERPG------RESYAIDYIPSRNEYKVARLLGGEEGDSKWDLACEVL 634
TR+ LP PG ESY Y YKV L D+ ++CE+
Sbjct: 178 PVTRKLTALP-----PGTLNSSHNESYGFAYDNISGRYKVVHLFR----DALMYISCEIF 228
Query: 635 IVNGCDKLQWKSIDAPDVDMTKCFGYRPISVNGVVYWVEYPRH--MVLCLDLSDDKFHQT 808
I+ W+++D P + FGY+P+ G ++W+ H + L++ ++KF
Sbjct: 229 ILG---TENWRAVDGPPFGLFGWFGYKPVEAIGALHWIPQVNHSDCIASLEIENEKFQTI 285
Query: 809 PLPKISLSKGGFIGMGNYLSFLKYTAPEDLDVWVLKDFCKGEWVKQQTISVRSKIIECMP 988
PLP G + +G+ LS++ + D+W+LK W+KQ +I++ + ++ +P
Sbjct: 286 PLPNSCNRYDGIVEIGSSLSYVTHMETH-TDIWILKGLSGEIWIKQHSINIGCR-MDMVP 343
Query: 989 ICSFE-NGDVIVFRKRKTLWAYNAKLQMWTKLGNAERIY----FWGSHMSSIV 1132
+ SF GD+I K + Y+ +L+ TK+ + +R+ F H++S+V
Sbjct: 344 LLSFRIRGDLIFKSKDGFFYIYDFELRSITKVEDKKRLRVSSDFLFPHVNSMV 396
>ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
sativus]
Length = 390
Score = 113 bits (283), Expect = 1e-22
Identities = 92/364 (25%), Positives = 159/364 (43%), Gaps = 59/364 (16%)
Frame = +2
Query: 86 AKSTDEDQEKQEDMKIKKPITPHLSDDVMIKILTRLRAKELNQIRYVCKQWNNIIRDPYF 265
AK ++ + +E K ++ + P++ +D + IL RL L++ +VCK W NII P F
Sbjct: 5 AKKSELVRNVEEKRKQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFNIICSPTF 64
Query: 266 IKQHSLNSEYGVIV-------------------------------------------QIS 316
++ H SE +I +
Sbjct: 65 VETHFHRSESVLIFTAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESLSLFHNLE 124
Query: 317 PGDD--VRFINMKGG--NIYEYNIDTILKGGIVATCDGLVLL----QLDGLWSLKFYIIN 472
P ++F+ + G N+ EY++ G I ATC+GL+LL ++ GL +IN
Sbjct: 125 PTSKRFIQFLEFQDGISNVGEYSLSCF--GQIRATCNGLILLDNKLKIGGL-----IVIN 177
Query: 473 LTTRENLELPLCSERPG------RESYAIDYIPSRNEYKVARLLGGEEGDSKWDLACEVL 634
TR+ LP PG ESY Y YKV L D+ ++CE+
Sbjct: 178 PVTRKLTALP-----PGTLNSSHNESYGFAYDNVSGRYKVVHLFR----DALMYISCEIF 228
Query: 635 IVNGCDKLQWKSIDAPDVDMTKCFGYRPISVNGVVYWVEYPRH--MVLCLDLSDDKFHQT 808
I+ W+++D P + FGY+P+ G ++W+ H + L++ ++KF
Sbjct: 229 ILG---TENWRAVDGPPFGLFGWFGYKPVEAIGALHWIPQVNHSDCIASLEIENEKFQTI 285
Query: 809 PLPKISLSKGGFIGMGNYLSFLKYTAPEDLDVWVLKDFCKGEWVKQQTISVRSKIIECMP 988
PLP G + +G+ LS++ + D+W+LK W+KQ +I++ + ++ +P
Sbjct: 286 PLPNSCNRYDGIVEIGSSLSYVTHMETH-TDIWILKGLSGEIWIKQHSINIGCR-MDMVP 343
Query: 989 ICSF 1000
+ SF
Sbjct: 344 LLSF 347
>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
predicted protein [Populus trichocarpa]
Length = 426
Score = 91.7 bits (226), Expect = 5e-16
Identities = 68/258 (26%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Frame = +2
Query: 329 VRFINMKGGNIY--EYNIDTILKGGIVATCDGLVLLQLDGLWSLKFYIINLTTRENLELP 502
++F+ K G I +YN+ + G I ATC+GL+LL D ++N TR+ + LP
Sbjct: 151 IQFMEFKEGKIKVGKYNVSCL--GNIRATCNGLILL--DNHVKKGLIVMNPVTRKLITLP 206
Query: 503 L---CSERPGRESYAIDYIPSRNEYKVARLLGGEEGDSKWDLACEVLIVNGCDKLQWKSI 673
L C+ +A++++ +YK+ L D + CE L + W+++
Sbjct: 207 LGTLCNYHKESYGFALNHVTG--DYKLVHLFR----DEFEYVTCETLDLA---TRSWRAV 257
Query: 674 DAPDVDMTKCFGYRPISVNGVVYWVEY--PRHMVLCLDLSDDKFHQTPLPKISLSKGGFI 847
+ P + FG+ P+S G ++W+ ++ +++ +++FH PLP + +
Sbjct: 258 NGPSFGLFNWFGHAPVSAIGALHWIPQLDNSDFIVSMEVENERFHCIPLPHRCTTHDRVM 317
Query: 848 GMGNYLSFLKYTAPEDL--DVWVLKDFCKGEWVKQQTISVRSKIIECMPICSFENGDVIV 1021
MG L F+ + EDL D+W LK +G W KQ +I+ + +I+ +P+ S ++
Sbjct: 318 EMGGLLCFVTH---EDLNIDIWNLKSVPEGIWTKQYSIT-KGSLIDMVPLFSLRISGDVI 373
Query: 1022 FRKRK--TLWAYNAKLQM 1069
FR+++ + AY+ K ++
Sbjct: 374 FRRKEDGSFHAYDFKSEV 391