BLASTX nr result

ID: Coptis24_contig00008939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008939
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317621.1| SAUR family protein [Populus trichocarpa] gi...   128   6e-28
ref|XP_002513416.1| conserved hypothetical protein [Ricinus comm...   125   5e-27
ref|NP_001235520.1| uncharacterized protein LOC100527910 [Glycin...   125   7e-27
ref|NP_001237754.1| uncharacterized protein LOC100500162 [Glycin...   124   9e-27
ref|XP_002267636.1| PREDICTED: uncharacterized protein LOC100256...   123   2e-26

>ref|XP_002317621.1| SAUR family protein [Populus trichocarpa]
           gi|222860686|gb|EEE98233.1| SAUR family protein [Populus
           trichocarpa]
          Length = 125

 Score =  128 bits (322), Expect = 6e-28
 Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
 Frame = -1

Query: 539 MKKINILLSKCKSLSRQLGXXXXXXXXXXXXXXXRFWSN---DGEHYKVILVGRSRKRYL 369
           MKKIN++L KCKSLSRQLG                 W +   + E+++ I VG +RKRY+
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREDLWGDHKQENENHETIFVGSTRKRYV 60

Query: 368 INSKHLSHPVLNALIERSNQKNSHGGEDGDTYVKCEVVLFDHLLWMLENGSPSFTSDDAL 189
           I+SK+LSHP++NALIE+S QK    GED    VKCEVV FDHLLWMLEN  P+  S D+L
Sbjct: 61  ISSKYLSHPLVNALIEKSRQK---PGEDNILVVKCEVVFFDHLLWMLENADPN-ASFDSL 116

Query: 188 EELAELYVY 162
           EELA+LY++
Sbjct: 117 EELADLYMF 125


>ref|XP_002513416.1| conserved hypothetical protein [Ricinus communis]
           gi|223547324|gb|EEF48819.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  125 bits (314), Expect = 5e-27
 Identities = 70/130 (53%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
 Frame = -1

Query: 539 MKKINILLSKCKSLSRQLGXXXXXXXXXXXXXXXRFWSN----DGEHYKVILVGRSRKRY 372
           MKKIN++L KCKSLSRQLG                 W +    D EH   + VG +RKRY
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELWGDHKEEDEEHQSTLFVGSTRKRY 60

Query: 371 LINSKHLSHPVLNALIERSNQKNSHGGEDGDTYVKCEVVLFDHLLWMLENGSPSFTSDDA 192
           +I+SK+LSHP++NALI++S Q+    GE+    VKCEVVLFDHLLWMLEN  P+  S D+
Sbjct: 61  VISSKYLSHPLVNALIQKSKQRQ---GEE-ILVVKCEVVLFDHLLWMLENADPNL-SFDS 115

Query: 191 LEELAELYVY 162
           LEELAELYV+
Sbjct: 116 LEELAELYVF 125


>ref|NP_001235520.1| uncharacterized protein LOC100527910 [Glycine max]
           gi|255633530|gb|ACU17123.1| unknown [Glycine max]
          Length = 126

 Score =  125 bits (313), Expect = 7e-27
 Identities = 66/130 (50%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
 Frame = -1

Query: 539 MKKINILLSKCKSLSRQLGXXXXXXXXXXXXXXXRFWSN----DGEHYKVILVGRSRKRY 372
           MKK+N++LSKCK+LS+ LG                 W      +GEH + + VG +RKRY
Sbjct: 1   MKKLNLILSKCKNLSKHLGRSSSFNSLRSKFAKEDLWEGNGMQEGEHCETVFVGSTRKRY 60

Query: 371 LINSKHLSHPVLNALIERSNQKNSHGGEDGDTYVKCEVVLFDHLLWMLENGSPSFTSDDA 192
           +I+SK+L+HP+L ALI  S QK   G ++    V CEVVLFDHLLWMLEN  P F S D+
Sbjct: 61  VISSKYLNHPLLKALINNSKQK---GSDESVLVVNCEVVLFDHLLWMLENADPKFGS-DS 116

Query: 191 LEELAELYVY 162
           LEELAELYV+
Sbjct: 117 LEELAELYVF 126


>ref|NP_001237754.1| uncharacterized protein LOC100500162 [Glycine max]
           gi|255629498|gb|ACU15095.1| unknown [Glycine max]
          Length = 130

 Score =  124 bits (312), Expect = 9e-27
 Identities = 67/131 (51%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
 Frame = -1

Query: 539 MKKINILLSKCKSLSRQLGXXXXXXXXXXXXXXXRFWSN-----DGEHYKVILVGRSRKR 375
           MKKIN+LL KCKSLSRQLG                 W       + E+ + I VG +RKR
Sbjct: 1   MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGRHGMQEDENCETIFVGSTRKR 60

Query: 374 YLINSKHLSHPVLNALIERSNQKNSHGGEDGDTYVKCEVVLFDHLLWMLENGSPSFTSDD 195
           Y+I+ K+L+HP+LNALI +S Q      E     V CEVVLFDHLLWMLEN  P F+S +
Sbjct: 61  YIISKKYLNHPLLNALINKSKQIKKDSDESSVLVVNCEVVLFDHLLWMLENADPKFSS-E 119

Query: 194 ALEELAELYVY 162
           +LEELAELYV+
Sbjct: 120 SLEELAELYVF 130


>ref|XP_002267636.1| PREDICTED: uncharacterized protein LOC100256141 [Vitis vinifera]
          Length = 122

 Score =  123 bits (309), Expect = 2e-26
 Identities = 66/126 (52%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
 Frame = -1

Query: 539 MKKINILLSKCKSLSRQLGXXXXXXXXXXXXXXXRFWSN--DGEHYKVILVGRSRKRYLI 366
           MKKIN++L KCKSLSRQLG                 W +  + EH + ILVG S++RY+I
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTRENVWGDMHEEEHREAILVGSSKRRYMI 60

Query: 365 NSKHLSHPVLNALIERSNQKNSHGGEDGDTYVKCEVVLFDHLLWMLENGSPSFTSDDALE 186
           +SK+L+HP+LNALI++S Q+           VKCEVVLFDHLLWML+NG P+ +S ++LE
Sbjct: 61  SSKYLNHPLLNALIDKSKQRPGEA-----LLVKCEVVLFDHLLWMLDNGDPNLSS-ESLE 114

Query: 185 ELAELY 168
           ELAELY
Sbjct: 115 ELAELY 120


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