BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008938
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   359   9e-97
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [...   353   5e-95
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [...   352   2e-94
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   346   8e-93
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              346   8e-93

>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  359 bits (922), Expect = 9e-97
 Identities = 189/303 (62%), Positives = 233/303 (76%), Gaps = 8/303 (2%)
 Frame = +1

Query: 268  EDENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLV 447
            +D  E PT +RFLVSN AAGSVIGKGGSTIT+FQS SGARI LSRNNEFFPGTTDRI++V
Sbjct: 29   QDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMV 88

Query: 448  SGPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFM 627
            SG  N++L AVELIL KL++E ++E+ N+ + + KVRLIVPN SC            SF+
Sbjct: 89   SGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFI 148

Query: 628  KDSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSY 807
            ++SQA IKISPQDN+Y G  DR+VTVTG+L+EQ+R I LI++KLAED +Y HSM++PF+Y
Sbjct: 149  EESQAGIKISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSPFTY 208

Query: 808  AGV---NFSSLPYGYMAPSVGILARNG----RNGSGG-FQNNKEDRSNSVTIGVADEHXX 963
            +G     +  +PY Y+ PSV   A NG     NG+G  FQN+KEDRSNS+TIGVADEH  
Sbjct: 209  SGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNSKEDRSNSMTIGVADEHIG 268

Query: 964  XXXXXXXXNLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAY 1143
                    N+ DI+QTSGA+IKISDRGD+ISGT++RKV ITGSQ AIRTAE+MI+QKVAY
Sbjct: 269  LVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAY 328

Query: 1144 ATE 1152
            ATE
Sbjct: 329  ATE 331


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  353 bits (907), Expect = 5e-95
 Identities = 188/303 (62%), Positives = 227/303 (74%), Gaps = 9/303 (2%)
 Frame = +1

Query: 271  DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450
            D  E PT IRFLVSN AAGSVIGKGGSTIT+FQS SGARI LSRN+EFFPGTTDRI++VS
Sbjct: 30   DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89

Query: 451  GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630
            G  N+I  AVELIL KL++E ++E+ N+ + + KVRL+VPN SC            SF++
Sbjct: 90   GAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIE 149

Query: 631  DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810
            DSQA IKISPQDNNY G  DRLVT+TGS +EQ+RAI LI++KL+ED +Y  SMN+PFSY 
Sbjct: 150  DSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSYP 209

Query: 811  GVNFS---SLPYGYMAPSVGILARNGRN------GSGGFQNNKEDRSNSVTIGVADEHXX 963
            GV FS    +PY Y+ PSV   A N  N        G  QN+KE+RSNS+T+GVADEH  
Sbjct: 210  GVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVADEHIG 269

Query: 964  XXXXXXXXNLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAY 1143
                    N+M+I+Q SGARIKISDRGD++SGT++RKV ITGSQ AIRTAE+MI+QKVAY
Sbjct: 270  LVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAY 329

Query: 1144 ATE 1152
            ATE
Sbjct: 330  ATE 332



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
 Frame = +1

Query: 268 EDEN--EGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIV 441
           ED+N  E  T++R +V NG+ G +IGKGG+TI  F   S A I +S  +  + G  DR+V
Sbjct: 113 EDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLV 172

Query: 442 LVSGPFNDILHAVELILGKLVAEGNAEES 528
            ++G F++ + A+ELI+ KL  + +  +S
Sbjct: 173 TLTGSFDEQMRAIELIVSKLSEDPHYAQS 201


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  352 bits (902), Expect = 2e-94
 Identities = 188/303 (62%), Positives = 226/303 (74%), Gaps = 9/303 (2%)
 Frame = +1

Query: 271  DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450
            D  E PT IRFLVSN AAGSVIGKGGSTIT+FQS SGARI LSRN+EFFPGTTDRI++VS
Sbjct: 30   DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89

Query: 451  GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630
            G  N+I  AVELIL KL++E ++E+ N+ + + KVRL+VPN SC            SF++
Sbjct: 90   GAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIE 149

Query: 631  DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810
            DSQA IKISPQDNNY G  DRLV +TG+ +EQ+RAI LI++KLAED +Y  SMN+PFSY 
Sbjct: 150  DSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSMNSPFSYP 209

Query: 811  GVNFS---SLPYGYMAPSVGILARNGRN------GSGGFQNNKEDRSNSVTIGVADEHXX 963
            GV FS    +PY Y+ PSV   A N  N        G  QN+KE+RSNS+T+GVADEH  
Sbjct: 210  GVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGVADEHIG 269

Query: 964  XXXXXXXXNLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAY 1143
                    N+M+I+Q SGARIKISDRGD+ISGT++RKV ITGSQ AIRTAE+MI+QKVAY
Sbjct: 270  LVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAY 329

Query: 1144 ATE 1152
            ATE
Sbjct: 330  ATE 332



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
 Frame = +1

Query: 268 EDEN--EGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIV 441
           ED+N  E  T++R +V NG+ G +IGKGG TI  F   S A I +S  +  + G  DR+V
Sbjct: 113 EDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLV 172

Query: 442 LVSGPFNDILHAVELILGKLVAEGNAEES 528
           +++G F++ + A+ELI+ KL  + +  +S
Sbjct: 173 MLTGTFDEQMRAIELIVSKLAEDPHYAQS 201


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  346 bits (888), Expect = 8e-93
 Identities = 191/295 (64%), Positives = 223/295 (75%), Gaps = 1/295 (0%)
 Frame = +1

Query: 271  DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450
            D  E  T IRFLVSN AAGSVIGKGGSTI +FQS SGARI LSRN+EFFPGT+DRI+++S
Sbjct: 28   DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 87

Query: 451  GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630
            G  N+I+ A+ELIL KL++E + E+ +E D R+KVRLIVPNSSC            SF++
Sbjct: 88   GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 147

Query: 631  DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810
            DSQASIKISPQDNNY GLTDRLVT+ GSLEEQ+RAI LIL+KL ED +Y   MNAPFSYA
Sbjct: 148  DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYA 207

Query: 811  GVNFSSLPYGYMAPSVGILARNGRNGSGG-FQNNKEDRSNSVTIGVADEHXXXXXXXXXX 987
               ++S+ Y             G NG+GG FQNNKEDRSNSVTIGVADEH          
Sbjct: 208  AA-YNSMNY-------------GPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGR 253

Query: 988  NLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAYATE 1152
            N+MDI+Q SGARIKISDRGDF+SGT++RKV ITGSQ AIR AE+MIMQKVA A+E
Sbjct: 254  NIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASE 308


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  346 bits (888), Expect = 8e-93
 Identities = 191/295 (64%), Positives = 223/295 (75%), Gaps = 1/295 (0%)
 Frame = +1

Query: 271  DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450
            D  E  T IRFLVSN AAGSVIGKGGSTI +FQS SGARI LSRN+EFFPGT+DRI+++S
Sbjct: 76   DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 135

Query: 451  GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630
            G  N+I+ A+ELIL KL++E + E+ +E D R+KVRLIVPNSSC            SF++
Sbjct: 136  GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 195

Query: 631  DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810
            DSQASIKISPQDNNY GLTDRLVT+ GSLEEQ+RAI LIL+KL ED +Y   MNAPFSYA
Sbjct: 196  DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYA 255

Query: 811  GVNFSSLPYGYMAPSVGILARNGRNGSGG-FQNNKEDRSNSVTIGVADEHXXXXXXXXXX 987
               ++S+ Y             G NG+GG FQNNKEDRSNSVTIGVADEH          
Sbjct: 256  AA-YNSMNY-------------GPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGR 301

Query: 988  NLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAYATE 1152
            N+MDI+Q SGARIKISDRGDF+SGT++RKV ITGSQ AIR AE+MIMQKVA A+E
Sbjct: 302  NIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASE 356