BLASTX nr result
ID: Coptis24_contig00008938
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008938 (1481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABQ23585.1| putative KH-domain containing protein [Medicago t... 359 9e-97 ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [... 353 5e-95 ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [... 352 2e-94 ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 346 8e-93 emb|CBI31382.3| unnamed protein product [Vitis vinifera] 346 8e-93 >gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula] Length = 334 Score = 359 bits (922), Expect = 9e-97 Identities = 189/303 (62%), Positives = 233/303 (76%), Gaps = 8/303 (2%) Frame = +1 Query: 268 EDENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLV 447 +D E PT +RFLVSN AAGSVIGKGGSTIT+FQS SGARI LSRNNEFFPGTTDRI++V Sbjct: 29 QDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMV 88 Query: 448 SGPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFM 627 SG N++L AVELIL KL++E ++E+ N+ + + KVRLIVPN SC SF+ Sbjct: 89 SGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFI 148 Query: 628 KDSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSY 807 ++SQA IKISPQDN+Y G DR+VTVTG+L+EQ+R I LI++KLAED +Y HSM++PF+Y Sbjct: 149 EESQAGIKISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSPFTY 208 Query: 808 AGV---NFSSLPYGYMAPSVGILARNG----RNGSGG-FQNNKEDRSNSVTIGVADEHXX 963 +G + +PY Y+ PSV A NG NG+G FQN+KEDRSNS+TIGVADEH Sbjct: 209 SGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNSKEDRSNSMTIGVADEHIG 268 Query: 964 XXXXXXXXNLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAY 1143 N+ DI+QTSGA+IKISDRGD+ISGT++RKV ITGSQ AIRTAE+MI+QKVAY Sbjct: 269 LVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAY 328 Query: 1144 ATE 1152 ATE Sbjct: 329 ATE 331 >ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max] Length = 337 Score = 353 bits (907), Expect = 5e-95 Identities = 188/303 (62%), Positives = 227/303 (74%), Gaps = 9/303 (2%) Frame = +1 Query: 271 DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450 D E PT IRFLVSN AAGSVIGKGGSTIT+FQS SGARI LSRN+EFFPGTTDRI++VS Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89 Query: 451 GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630 G N+I AVELIL KL++E ++E+ N+ + + KVRL+VPN SC SF++ Sbjct: 90 GAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIE 149 Query: 631 DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810 DSQA IKISPQDNNY G DRLVT+TGS +EQ+RAI LI++KL+ED +Y SMN+PFSY Sbjct: 150 DSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSYP 209 Query: 811 GVNFS---SLPYGYMAPSVGILARNGRN------GSGGFQNNKEDRSNSVTIGVADEHXX 963 GV FS +PY Y+ PSV A N N G QN+KE+RSNS+T+GVADEH Sbjct: 210 GVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVADEHIG 269 Query: 964 XXXXXXXXNLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAY 1143 N+M+I+Q SGARIKISDRGD++SGT++RKV ITGSQ AIRTAE+MI+QKVAY Sbjct: 270 LVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAY 329 Query: 1144 ATE 1152 ATE Sbjct: 330 ATE 332 Score = 65.5 bits (158), Expect = 3e-08 Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Frame = +1 Query: 268 EDEN--EGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIV 441 ED+N E T++R +V NG+ G +IGKGG+TI F S A I +S + + G DR+V Sbjct: 113 EDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLV 172 Query: 442 LVSGPFNDILHAVELILGKLVAEGNAEES 528 ++G F++ + A+ELI+ KL + + +S Sbjct: 173 TLTGSFDEQMRAIELIVSKLSEDPHYAQS 201 >ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max] Length = 337 Score = 352 bits (902), Expect = 2e-94 Identities = 188/303 (62%), Positives = 226/303 (74%), Gaps = 9/303 (2%) Frame = +1 Query: 271 DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450 D E PT IRFLVSN AAGSVIGKGGSTIT+FQS SGARI LSRN+EFFPGTTDRI++VS Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89 Query: 451 GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630 G N+I AVELIL KL++E ++E+ N+ + + KVRL+VPN SC SF++ Sbjct: 90 GAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIE 149 Query: 631 DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810 DSQA IKISPQDNNY G DRLV +TG+ +EQ+RAI LI++KLAED +Y SMN+PFSY Sbjct: 150 DSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSMNSPFSYP 209 Query: 811 GVNFS---SLPYGYMAPSVGILARNGRN------GSGGFQNNKEDRSNSVTIGVADEHXX 963 GV FS +PY Y+ PSV A N N G QN+KE+RSNS+T+GVADEH Sbjct: 210 GVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGVADEHIG 269 Query: 964 XXXXXXXXNLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAY 1143 N+M+I+Q SGARIKISDRGD+ISGT++RKV ITGSQ AIRTAE+MI+QKVAY Sbjct: 270 LVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAY 329 Query: 1144 ATE 1152 ATE Sbjct: 330 ATE 332 Score = 66.2 bits (160), Expect = 2e-08 Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Frame = +1 Query: 268 EDEN--EGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIV 441 ED+N E T++R +V NG+ G +IGKGG TI F S A I +S + + G DR+V Sbjct: 113 EDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLV 172 Query: 442 LVSGPFNDILHAVELILGKLVAEGNAEES 528 +++G F++ + A+ELI+ KL + + +S Sbjct: 173 MLTGTFDEQMRAIELIVSKLAEDPHYAQS 201 >ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera] Length = 309 Score = 346 bits (888), Expect = 8e-93 Identities = 191/295 (64%), Positives = 223/295 (75%), Gaps = 1/295 (0%) Frame = +1 Query: 271 DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450 D E T IRFLVSN AAGSVIGKGGSTI +FQS SGARI LSRN+EFFPGT+DRI+++S Sbjct: 28 DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 87 Query: 451 GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630 G N+I+ A+ELIL KL++E + E+ +E D R+KVRLIVPNSSC SF++ Sbjct: 88 GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 147 Query: 631 DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810 DSQASIKISPQDNNY GLTDRLVT+ GSLEEQ+RAI LIL+KL ED +Y MNAPFSYA Sbjct: 148 DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYA 207 Query: 811 GVNFSSLPYGYMAPSVGILARNGRNGSGG-FQNNKEDRSNSVTIGVADEHXXXXXXXXXX 987 ++S+ Y G NG+GG FQNNKEDRSNSVTIGVADEH Sbjct: 208 AA-YNSMNY-------------GPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGR 253 Query: 988 NLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAYATE 1152 N+MDI+Q SGARIKISDRGDF+SGT++RKV ITGSQ AIR AE+MIMQKVA A+E Sbjct: 254 NIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASE 308 >emb|CBI31382.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 346 bits (888), Expect = 8e-93 Identities = 191/295 (64%), Positives = 223/295 (75%), Gaps = 1/295 (0%) Frame = +1 Query: 271 DENEGPTQIRFLVSNGAAGSVIGKGGSTITEFQSLSGARIVLSRNNEFFPGTTDRIVLVS 450 D E T IRFLVSN AAGSVIGKGGSTI +FQS SGARI LSRN+EFFPGT+DRI+++S Sbjct: 76 DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 135 Query: 451 GPFNDILHAVELILGKLVAEGNAEESNEYDSRAKVRLIVPNSSCXXXXXXXXXXXXSFMK 630 G N+I+ A+ELIL KL++E + E+ +E D R+KVRLIVPNSSC SF++ Sbjct: 136 GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 195 Query: 631 DSQASIKISPQDNNYNGLTDRLVTVTGSLEEQLRAIFLILAKLAEDSYYPHSMNAPFSYA 810 DSQASIKISPQDNNY GLTDRLVT+ GSLEEQ+RAI LIL+KL ED +Y MNAPFSYA Sbjct: 196 DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYA 255 Query: 811 GVNFSSLPYGYMAPSVGILARNGRNGSGG-FQNNKEDRSNSVTIGVADEHXXXXXXXXXX 987 ++S+ Y G NG+GG FQNNKEDRSNSVTIGVADEH Sbjct: 256 AA-YNSMNY-------------GPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGR 301 Query: 988 NLMDINQTSGARIKISDRGDFISGTSERKVIITGSQAAIRTAENMIMQKVAYATE 1152 N+MDI+Q SGARIKISDRGDF+SGT++RKV ITGSQ AIR AE+MIMQKVA A+E Sbjct: 302 NIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASE 356