BLASTX nr result
ID: Coptis24_contig00008936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008936
(358 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus c... 87 2e-15
ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13
dbj|BAD23410.1| hypothetical protein [Oryza sativa Japonica Grou... 75 4e-12
emb|CBI34537.3| unnamed protein product [Vitis vinifera] 75 4e-12
gb|EEE69564.1| hypothetical protein OsJ_29073 [Oryza sativa Japo... 75 4e-12
>ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus communis]
gi|223541845|gb|EEF43391.1| hypothetical protein
RCOM_1312210 [Ricinus communis]
Length = 520
Score = 86.7 bits (213), Expect = 2e-15
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYT+Q TQKAKKFH+G+LRL+ R QVTLL++D TILSSK+L SEDV+SGST L
Sbjct: 259 LYTSQITQKAKKFHNGILRLTTSGSCRMQVTLLNEDKTILSSKFLNLSEDVRSGSTFVLP 318
Query: 177 AHLVEIGEERTYQE 136
+LVE+GE + +E
Sbjct: 319 KYLVEVGEPHSPRE 332
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/102 (36%), Positives = 55/102 (53%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
+YTTQ TQKAKK+HDG LRL+ +Q+ L + +L S++L E ++S ++
Sbjct: 145 MYTTQITQKAKKYHDGFLRLTSSGSFGRQIMLYDERREVLDSRFLTKDEVLRSHESITFN 204
Query: 177 AHLVEIGEERTYQEVPFAGEIQSDNTSSRGVASNSSISHIDR 52
AHLV+IGE ++P IQ + + V I H R
Sbjct: 205 AHLVDIGEPEGETQIPGDLNIQGNTAN---VVGKKGIKHEHR 243
>ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|222841761|gb|EEE79308.1|
predicted protein [Populus trichocarpa]
Length = 543
Score = 80.1 bits (196), Expect = 2e-13
Identities = 52/104 (50%), Positives = 65/104 (62%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYT+ TQKAKK+H G+LRL+ R QVTLLS+ T L+SK+L SEDVK GS + L
Sbjct: 296 LYTSHITQKAKKYHSGILRLASCGSYRMQVTLLSEGKTFLTSKFLSLSEDVKVGSKLALP 355
Query: 177 AHLVEIGEERTYQEVPFAGEIQSDNTSSRGVASNSSISHIDRIK 46
+LVE+GE E G+ Q NT R A++ SIS DR K
Sbjct: 356 KYLVEVGEPLMSSE----GKYQ--NTYLREDANSRSISIEDRTK 393
Score = 61.2 bits (147), Expect = 8e-08
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYTTQ TQK KK+HDG LRL+ Q+ L L ++LK E + SG ++
Sbjct: 182 LYTTQMTQKTKKYHDGFLRLASRESLGTQIMLYDASKRQLDCRFLKKDEIISSGESISFD 241
Query: 177 AHLVEIGEERTYQEVPFAGEIQSDNTSS-----------RGVASNSSIS 64
AHLV+IGE ++ IQ +N++ G+ N SI+
Sbjct: 242 AHLVDIGEPGGENQLLEDLNIQGNNSNDASKPGTMHGQPNGIKDNKSIA 290
>dbj|BAD23410.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50726192|dbj|BAD33711.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 682
Score = 75.5 bits (184), Expect = 4e-12
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYTTQ TQKAKK+HDGV++L KQ+ LL +DG +L S+YLKS E V+SG +L
Sbjct: 269 LYTTQLTQKAKKYHDGVIKLVQVGSHAKQIVLLDEDGGVLGSRYLKSGESVESGMKYQLP 328
Query: 177 AHLVEIGEERTYQE-----------VPFAGEIQSDNTSSRGVASNSSISHIDRIK 46
+L+E+ E R + + G NT+ R N S + +K
Sbjct: 329 NYLIEVCEIRKQKNDVESKHPSEVVLSQTGSANGHNTTDRTDGRNKSPKFVSPLK 383
Score = 74.3 bits (181), Expect = 9e-12
Identities = 40/101 (39%), Positives = 61/101 (60%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYTTQ TQKAKKFHDGV+RL+ KQ+ LL ++G +L+++YLKS E +++G
Sbjct: 150 LYTTQLTQKAKKFHDGVVRLAQVSSHAKQIILLDEEGGVLATRYLKSGESLETGKKCHFP 209
Query: 177 AHLVEIGEERTYQEVPFAGEIQSDNTSSRGVASNSSISHID 55
+L+EI E ++ + + +S NT+ S I +D
Sbjct: 210 NYLIEICEAKSVNK--DLEDSKSSNTAGSSKPETSKIGVVD 248
>emb|CBI34537.3| unnamed protein product [Vitis vinifera]
Length = 148
Score = 75.5 bits (184), Expect = 4e-12
Identities = 39/90 (43%), Positives = 53/90 (58%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYTTQ TQKAKK+HDG LRLS+G Q +QV L +L S++LK E ++SG ++
Sbjct: 38 LYTTQITQKAKKYHDGFLRLSIGGSQGRQVMLYDASKKLLDSRFLKKDEVIRSGESLTFD 97
Query: 177 AHLVEIGEERTYQEVPFAGEIQSDNTSSRG 88
AHLV++GE + +Q N G
Sbjct: 98 AHLVDVGEPEGNHKPVMGLNVQGINCKEVG 127
>gb|EEE69564.1| hypothetical protein OsJ_29073 [Oryza sativa Japonica Group]
Length = 798
Score = 75.5 bits (184), Expect = 4e-12
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYTTQ TQKAKK+HDGV++L KQ+ LL +DG +L S+YLKS E V+SG +L
Sbjct: 325 LYTTQLTQKAKKYHDGVIKLVQVGSHAKQIVLLDEDGGVLGSRYLKSGESVESGMKYQLP 384
Query: 177 AHLVEIGEERTYQE-----------VPFAGEIQSDNTSSRGVASNSSISHIDRIK 46
+L+E+ E R + + G NT+ R N S + +K
Sbjct: 385 NYLIEVCEIRKQKNDVESKHPSEVVLSQTGSANGHNTTDRTDGRNKSPKFVSPLK 439
Score = 72.8 bits (177), Expect = 3e-11
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Frame = -2
Query: 357 LYTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELT 178
LYTTQ TQKAKKFHDGV+RL+ KQ+ LL ++G +L+++YLKS E +++G
Sbjct: 150 LYTTQLTQKAKKFHDGVVRLAQVSSHAKQIILLDEEGGVLATRYLKSGESLETGKKCHFP 209
Query: 177 AHLVEI--------------GEERTYQEVPFAGEIQSDNTSS 94
+L+EI EE Q P +GE S+ T S
Sbjct: 210 NYLIEICEAKSVNKGLQTNSSEEPMVQTRPRSGENTSNKTGS 251