BLASTX nr result

ID: Coptis24_contig00008932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008932
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553543.1| PREDICTED: uncharacterized protein LOC100786...   155   2e-35
ref|XP_003632609.1| PREDICTED: uncharacterized protein LOC100854...   150   4e-34
ref|XP_002326344.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33
ref|XP_002519556.1| conserved hypothetical protein [Ricinus comm...   147   5e-33
ref|XP_004165143.1| PREDICTED: uncharacterized LOC101215662 [Cuc...   132   1e-28

>ref|XP_003553543.1| PREDICTED: uncharacterized protein LOC100786645 [Glycine max]
          Length = 259

 Score =  155 bits (392), Expect = 2e-35
 Identities = 106/263 (40%), Positives = 134/263 (50%), Gaps = 2/263 (0%)
 Frame = +2

Query: 80  MDCLWFHQIILFSSEXXXXXXXXXXXXXXXVEPITKIGLNSESDLSLTPPSEENISEGSS 259
           MD LWFHQ ILFS                   P ++    S S LS  PP +E   E S+
Sbjct: 13  MDRLWFHQAILFSEPTASVISLPSPPDEKKPVPTSESVSCSSSILSSPPPPDE---ETST 69

Query: 260 DTSPTSPKEDNLVXXXXXXXXXXVINYYNYKRKRPTXXXXXXXXXXXXXXXXXXXXXXXX 439
           D SP+S ++ +            + N    K                             
Sbjct: 70  DESPSSEQQLSSESMSVPLQDGSINNEEERKDGLTRMNLLDNRTRSHSSSPSTQNRHRKL 129

Query: 440 LRNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPGLQRLD-- 613
            +     A  L+K++SCR+L ELE +EVKGFMDLGFTFKKE LS RMMSVIPGLQRL   
Sbjct: 130 RKPATTCARKLQKSISCRTLGELELDEVKGFMDLGFTFKKECLSPRMMSVIPGLQRLGVM 189

Query: 614 EYKDGPEGHCINAKSXXXXXXXXXXLDRVKNGVSRPYLSEAWLIKRPDSPLLNMRIPRIS 793
           +  +  EG+ I A+               K G+ RPYLSEAW IKRPDSPLLN++IP+  
Sbjct: 190 DATETVEGNHIEAEEQ-------------KRGIMRPYLSEAWPIKRPDSPLLNLKIPKRC 236

Query: 794 TSSHMKKHLKCWARTVASAIELE 862
           +S++MKKHL+ WA+TVAS I  E
Sbjct: 237 SSANMKKHLRFWAKTVASEIHQE 259


>ref|XP_003632609.1| PREDICTED: uncharacterized protein LOC100854914 [Vitis vinifera]
           gi|297741575|emb|CBI32707.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  150 bits (380), Expect = 4e-34
 Identities = 109/272 (40%), Positives = 137/272 (50%), Gaps = 4/272 (1%)
 Frame = +2

Query: 53  YSPNNLLLVMDCLWFHQIILFSSEXXXXXXXXXXXXXXXVEPITKIG---LNSESDLSLT 223
           +S + L+  MD LWF+Q+ILFS+                + P T      L   SDLS  
Sbjct: 5   HSLSLLVAAMDGLWFNQVILFSNPMSLLSPTTLR-----IAPQTTSSDSLLYCLSDLSAP 59

Query: 224 PPSEENISEGSSDTSPTSPKEDNLVXXXXXXXXXXVINYYNYKRKRPTXXXXXXXXXXXX 403
           PPSEE  S   S  SP     D             +      +++RP             
Sbjct: 60  PPSEEETSAYLS-ASPLPQLVDEEDDPKNQGEDKEM-----KQKERPNRLNLMTRKTRSF 113

Query: 404 XXXXXXXXXXXXLRNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMM 583
                        R +GA   L  K MSC+SL ELE EEVKGFMDLGF FK+E LS RM+
Sbjct: 114 SSSPATKKRAKNHRYLGAVTSL-PKTMSCKSLRELELEEVKGFMDLGFKFKREHLSPRMI 172

Query: 584 SVIPGLQRLDEYKDGPEGHCINA-KSXXXXXXXXXXLDRVKNGVSRPYLSEAWLIKRPDS 760
           +VIPGLQRL  Y +  E    ++ +S           +  +  V RPYLSEAWLIKRPDS
Sbjct: 173 TVIPGLQRLGGYNNEQETELSDSTQSANYKDDKIEEEEEEERAVVRPYLSEAWLIKRPDS 232

Query: 761 PLLNMRIPRISTSSHMKKHLKCWARTVASAIE 856
           PLLN+++PR+S S+ MKKHL  WARTVA  I+
Sbjct: 233 PLLNLKMPRVSASADMKKHLWHWARTVAYVIQ 264


>ref|XP_002326344.1| predicted protein [Populus trichocarpa] gi|222833537|gb|EEE72014.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  148 bits (374), Expect = 2e-33
 Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = +2

Query: 467 LLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPGLQRLDEYKDGPEGHCI 646
           +L K+MSCRSL ELE EEVKGFMDLGF FKKE LS RMMSV+PGLQRL  Y++    +  
Sbjct: 34  ILPKSMSCRSLGELELEEVKGFMDLGFIFKKEYLSPRMMSVVPGLQRLGLYQNRQNINLR 93

Query: 647 NAKSXXXXXXXXXXLDR-VKNGVSRPYLSEAWLIKRPDSPLLNMRIPRISTSSHMKKHLK 823
           ++K            +   + G+ RPYLSE+WLIKRPDSPLLN+R+PR+S ++ MK HLK
Sbjct: 94  DSKEAEDHDELIRKQEEDEEKGIIRPYLSESWLIKRPDSPLLNLRVPRVSVAADMKIHLK 153

Query: 824 CWARTVASAIELE 862
            WARTVAS I+ E
Sbjct: 154 FWARTVASEIQPE 166


>ref|XP_002519556.1| conserved hypothetical protein [Ricinus communis]
           gi|223541419|gb|EEF42970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  147 bits (371), Expect = 5e-33
 Identities = 82/150 (54%), Positives = 102/150 (68%), Gaps = 10/150 (6%)
 Frame = +2

Query: 443 RNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPGLQRLDEYK 622
           +NIG +  +L+K+MSCRSL ELE EEVKGFMDLGF FKKEQ+S RM+SV+PGL RL  YK
Sbjct: 34  KNIGLRK-VLQKSMSCRSLGELELEEVKGFMDLGFIFKKEQISPRMISVVPGLSRLGLYK 92

Query: 623 DGPEG-HCINAKSXXXXXXXXXXLDR---------VKNGVSRPYLSEAWLIKRPDSPLLN 772
                   IN++            D           + G+ RPYLSEAWLI+RPDSPLLN
Sbjct: 93  HKHNTTKLINSEVVPEDEDCYDSDDHDIVRDDQQEQEKGIIRPYLSEAWLIRRPDSPLLN 152

Query: 773 MRIPRISTSSHMKKHLKCWARTVASAIELE 862
           +R+P++S ++ MKKHLK WARTVAS I+ E
Sbjct: 153 LRLPKVSAAADMKKHLKFWARTVASEIQQE 182


>ref|XP_004165143.1| PREDICTED: uncharacterized LOC101215662 [Cucumis sativus]
          Length = 274

 Score =  132 bits (333), Expect = 1e-28
 Identities = 98/273 (35%), Positives = 134/273 (49%), Gaps = 8/273 (2%)
 Frame = +2

Query: 62  NNLLLV--MDCLWFHQIILFSSEXXXXXXXXXXXXXXXVEPITKIGLNSESDLSLTPPSE 235
           N L LV  MD LW+HQIIL SS+                 P T    +S     L+P  +
Sbjct: 34  NTLCLVSAMDRLWYHQIILCSSDPLFTSHFPNLLNSTSSFPFTNFLPSSP----LSPLVD 89

Query: 236 ENISEGSSDTSPTSPKEDNLVXXXXXXXXXXVINYYNYKRKRPTXXXXXXXXXXXXXXXX 415
           + I   SS +S      DN+             NY N + K                   
Sbjct: 90  QTILPSSSSSS-----SDNISLVSQE-------NYSNEEDKNKQDAKRELSEDQSLNGLK 137

Query: 416 XXXXXXXXLRNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIP 595
                     ++G K   L K+ SC+SL ELE EEVKGFMDLGF FK+E LS +M+ ++P
Sbjct: 138 F---------SVGRK---LNKSTSCKSLGELELEEVKGFMDLGFEFKRESLSPQMVKLVP 185

Query: 596 GLQRL------DEYKDGPEGHCINAKSXXXXXXXXXXLDRVKNGVSRPYLSEAWLIKRPD 757
           GLQRL         +D  +G   + K               K  ++RPYLSEAW+I+RP+
Sbjct: 186 GLQRLRTQINKQNLEDDEDGDGDHDKENDDDDDDKNK----KREIARPYLSEAWIIRRPN 241

Query: 758 SPLLNMRIPRISTSSHMKKHLKCWARTVASAIE 856
           SPLL++R+P++S++S MKKHL+ WA+TVA  I+
Sbjct: 242 SPLLDLRMPKVSSTSDMKKHLRSWAKTVAFEIQ 274


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