BLASTX nr result

ID: Coptis24_contig00008931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008931
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509591.1| DNA binding protein, putative [Ricinus commu...   240   7e-61
ref|XP_002263775.2| PREDICTED: uncharacterized protein LOC100247...   240   9e-61
emb|CBI38444.3| unnamed protein product [Vitis vinifera]              240   9e-61
gb|AAR96007.1| transposase-like protein [Musa acuminata]              239   1e-60
ref|XP_004147940.1| PREDICTED: uncharacterized protein LOC101222...   237   8e-60

>ref|XP_002509591.1| DNA binding protein, putative [Ricinus communis]
            gi|223549490|gb|EEF50978.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 670

 Score =  240 bits (613), Expect = 7e-61
 Identities = 135/442 (30%), Positives = 226/442 (51%), Gaps = 2/442 (0%)
 Frame = -3

Query: 1625 TKLLRDVRKEVNEYVSAIKASWSLTGCTLMSDTWTDSENHSFITLIAYSPKGAVFLKSFE 1446
            + LL  V+ +++++    +  W  TGCT++ D W+D    S I      PKG +FLKS +
Sbjct: 187  SSLLEKVKGDIHDWYRKYRDDWKETGCTILCDGWSDGRTKSVIVFSVTCPKGTLFLKSVD 246

Query: 1445 STDSTIAGDFLEDILLSIVDEIGSENVVQIIVNKVSCGEYAMDLVAENYPHIYRTKCASH 1266
             +      ++L ++L SI+ E+G ENV+Q+I +  +   YA  L+   Y  ++ + CAS+
Sbjct: 247  ISGHENDANYLFELLESILLEVGVENVIQVITDSTASYVYAGRLLMAKYSSLFWSPCASY 306

Query: 1265 GFQQMLEDIYENVEWIQSAFDDAKSIVDYLYKYPLVLKSMQVHKPDKELKRPCETTCASY 1086
               +MLEDI +  EW+ +  ++A +I  Y+Y +   L  M+     +EL RP  T   S 
Sbjct: 307  CVNKMLEDISKQ-EWVGTVMEEANTITKYIYSHAWTLNMMRRFTGGRELIRPRITRYVSN 365

Query: 1085 FVMLQSLIDFEDCLRTIVVSPEWSVMNESKTPRGNTIVQLIQSLDFWNRGKEVIASLEPL 906
            ++ L++++  ED L+ +    EW     S+ P    +   +    FW    E ++  EPL
Sbjct: 366  YLSLRAIVIQEDNLKHMFSHSEWLSSMHSRRPDAQIVKSFLSQDRFWKFAHEAVSISEPL 425

Query: 905  ISVLHLVDGEGSTAGYLYEAMEQVRVEFKQRCSNDESKSLKLLKIFDSRRGDIVHK-IHA 729
            I +L +VDG+    GY+YE +E+ +V  K      E K + + +I D R    +H  +HA
Sbjct: 426  IKILRIVDGDMPAMGYIYEVLERAKVSIKAYYKGIEDKYMPIWEIIDRRWNIQLHSPLHA 485

Query: 728  AASFLNPSLMYDGKIKYEQPDIRDGMNYVVEHMVCSS-EMDDFISQLLLYNGKSSKLFNT 552
            AA+FLNPS+ Y+   K +   +R+G    +  M  S  +  +   +  +Y      L   
Sbjct: 486  AAAFLNPSIFYNQNFKIDL-RMRNGFQEAMIKMATSDIDKIEITKEHPIYINGQGALGTD 544

Query: 551  LSVLMMKKAHPRVWWEYNGSEVPLLRKVAIRILSQPCSSSLCGRKWSAYEVARTMKANNS 372
             +++      P  WW   G E+P L++VAIR+LSQPCSS  C   WS +E   T K N +
Sbjct: 545  FAIMGRTLNSPGDWWAGYGYEIPTLQRVAIRLLSQPCSSHWCRWNWSTFESIHTKKRNKA 604

Query: 371  PESTFEEIVYTRMNMMMMASYR 306
                  ++V+   N+ + A Y+
Sbjct: 605  ELEKLNDLVFVHCNLWLQAIYQ 626


>ref|XP_002263775.2| PREDICTED: uncharacterized protein LOC100247282 [Vitis vinifera]
          Length = 672

 Score =  240 bits (612), Expect = 9e-61
 Identities = 135/437 (30%), Positives = 221/437 (50%), Gaps = 2/437 (0%)
 Frame = -3

Query: 1619 LLRDVRKEVNEYVSAIKASWSLTGCTLMSDTWTDSENHSFITLIAYSPKGAVFLKSFEST 1440
            L+  V+ +VN+    ++  W  TGCT++ D W+D    S +      PKG +FLKS + +
Sbjct: 188  LMEKVKCDVNDCCKKLRDGWRATGCTILCDCWSDGRTKSLVVFSVTCPKGTLFLKSVDIS 247

Query: 1439 DSTIAGDFLEDILLSIVDEIGSENVVQIIVNKVSCGEYAMDLVAENYPHIYRTKCASHGF 1260
                   +L ++L S+V E+G ENVVQ+I +  +   YA  L+   Y  ++ + CAS   
Sbjct: 248  GHADDAHYLYELLESVVLEVGLENVVQVITDSAASYVYAGRLLMAKYTTLFWSPCASFCI 307

Query: 1259 QQMLEDIYENVEWIQSAFDDAKSIVDYLYKYPLVLKSMQVHKPDKELKRPCETTCASYFV 1080
             +MLEDI +  EW+ +  ++AK+I  Y+Y +  +L  M+     +EL RP  T   + F+
Sbjct: 308  DKMLEDISKQ-EWVSTVLEEAKTITHYIYSHAWILNMMRKFTGGRELIRPRITRFVTNFL 366

Query: 1079 MLQSLIDFEDCLRTIVVSPEWSVMNESKTPRGNTIVQLIQSLDFWNRGKEVIASLEPLIS 900
             L+S++  ED L+ +    +W     S+ P    +  L+    FW    E ++  EPL+ 
Sbjct: 367  SLRSIVVQEDNLKLMFSHMDWMSSVYSRRPDSQNVKSLLYLERFWKSAHEAVSVSEPLVK 426

Query: 899  VLHLVDGEGSTAGYLYEAMEQVRVEFKQRCSNDESKSLKLLKIFDSRRGDIVHK-IHAAA 723
            VL +VDG+    GY+YE +E+ ++  K   ++ E K + +  I D R    +H  +HAAA
Sbjct: 427  VLRIVDGDMPAMGYIYEGIERAKIAIKGYYNSIEEKYMPIWDIIDRRWNVQLHSPLHAAA 486

Query: 722  SFLNPSLMYDGKIKYEQPDIRDGMNYVVEHMVCSS-EMDDFISQLLLYNGKSSKLFNTLS 546
            +FLNPS+ Y    K +   +R+G    +  M     +  +   +  +Y      L    +
Sbjct: 487  AFLNPSIFYGPNFKVDL-RMRNGFQEAMRKMATEDRDKIEITKEHPIYINAQGALGTEFA 545

Query: 545  VLMMKKAHPRVWWEYNGSEVPLLRKVAIRILSQPCSSSLCGRKWSAYEVARTMKANNSPE 366
            ++         WW   G E+P L++ AIRILSQPCSS  CG  WS++E   T K N    
Sbjct: 546  IMGRTLNAAGDWWAGYGYEIPTLQRAAIRILSQPCSSHWCGWNWSSFEALHTKKRNRMEL 605

Query: 365  STFEEIVYTRMNMMMMA 315
                ++V    N+ + A
Sbjct: 606  EKLNDLVLVHCNLHLQA 622


>emb|CBI38444.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  240 bits (612), Expect = 9e-61
 Identities = 135/437 (30%), Positives = 221/437 (50%), Gaps = 2/437 (0%)
 Frame = -3

Query: 1619 LLRDVRKEVNEYVSAIKASWSLTGCTLMSDTWTDSENHSFITLIAYSPKGAVFLKSFEST 1440
            L+  V+ +VN+    ++  W  TGCT++ D W+D    S +      PKG +FLKS + +
Sbjct: 228  LMEKVKCDVNDCCKKLRDGWRATGCTILCDCWSDGRTKSLVVFSVTCPKGTLFLKSVDIS 287

Query: 1439 DSTIAGDFLEDILLSIVDEIGSENVVQIIVNKVSCGEYAMDLVAENYPHIYRTKCASHGF 1260
                   +L ++L S+V E+G ENVVQ+I +  +   YA  L+   Y  ++ + CAS   
Sbjct: 288  GHADDAHYLYELLESVVLEVGLENVVQVITDSAASYVYAGRLLMAKYTTLFWSPCASFCI 347

Query: 1259 QQMLEDIYENVEWIQSAFDDAKSIVDYLYKYPLVLKSMQVHKPDKELKRPCETTCASYFV 1080
             +MLEDI +  EW+ +  ++AK+I  Y+Y +  +L  M+     +EL RP  T   + F+
Sbjct: 348  DKMLEDISKQ-EWVSTVLEEAKTITHYIYSHAWILNMMRKFTGGRELIRPRITRFVTNFL 406

Query: 1079 MLQSLIDFEDCLRTIVVSPEWSVMNESKTPRGNTIVQLIQSLDFWNRGKEVIASLEPLIS 900
             L+S++  ED L+ +    +W     S+ P    +  L+    FW    E ++  EPL+ 
Sbjct: 407  SLRSIVVQEDNLKLMFSHMDWMSSVYSRRPDSQNVKSLLYLERFWKSAHEAVSVSEPLVK 466

Query: 899  VLHLVDGEGSTAGYLYEAMEQVRVEFKQRCSNDESKSLKLLKIFDSRRGDIVHK-IHAAA 723
            VL +VDG+    GY+YE +E+ ++  K   ++ E K + +  I D R    +H  +HAAA
Sbjct: 467  VLRIVDGDMPAMGYIYEGIERAKIAIKGYYNSIEEKYMPIWDIIDRRWNVQLHSPLHAAA 526

Query: 722  SFLNPSLMYDGKIKYEQPDIRDGMNYVVEHMVCSS-EMDDFISQLLLYNGKSSKLFNTLS 546
            +FLNPS+ Y    K +   +R+G    +  M     +  +   +  +Y      L    +
Sbjct: 527  AFLNPSIFYGPNFKVDL-RMRNGFQEAMRKMATEDRDKIEITKEHPIYINAQGALGTEFA 585

Query: 545  VLMMKKAHPRVWWEYNGSEVPLLRKVAIRILSQPCSSSLCGRKWSAYEVARTMKANNSPE 366
            ++         WW   G E+P L++ AIRILSQPCSS  CG  WS++E   T K N    
Sbjct: 586  IMGRTLNAAGDWWAGYGYEIPTLQRAAIRILSQPCSSHWCGWNWSSFEALHTKKRNRMEL 645

Query: 365  STFEEIVYTRMNMMMMA 315
                ++V    N+ + A
Sbjct: 646  EKLNDLVLVHCNLHLQA 662


>gb|AAR96007.1| transposase-like protein [Musa acuminata]
          Length = 670

 Score =  239 bits (611), Expect = 1e-60
 Identities = 135/435 (31%), Positives = 228/435 (52%), Gaps = 2/435 (0%)
 Frame = -3

Query: 1619 LLRDVRKEVNEYVSAIKASWSLTGCTLMSDTWTDSENHSFITLIAYSPKGAVFLKSFEST 1440
            LL  V++E+NE    +K  W  TGCT++SD W+D  + S + L   SPKG  FLK  + +
Sbjct: 190  LLEKVKEEINENHRKLKDEWKDTGCTILSDNWSDGRSKSLLVLSVASPKGTQFLKLVDIS 249

Query: 1439 DSTIAGDFLEDILLSIVDEIGSENVVQIIVNKVSCGEYAMDLVAENYPHIYRTKCASHGF 1260
                   +L ++L S++ E+G+ENVVQ+I +  +   YA  L+ + YP ++   CAS+  
Sbjct: 250  SRADDAYYLFELLDSVIMEVGAENVVQVITDSATSYTYAAGLLLKKYPSLFWFPCASYSI 309

Query: 1259 QQMLEDIYENVEWIQSAFDDAKSIVDYLYKYPLVLKSMQVHKPDKELKRPCETTCASYFV 1080
            ++MLEDI   +EW+ +  ++ ++I  ++     +L  M+     +EL RP      ++F+
Sbjct: 310  EKMLEDI-SKLEWVSTTLEETRTIARFICSDGWILSLMKKLTGGRELVRPKVARFMTHFL 368

Query: 1079 MLQSLIDFEDCLRTIVVSPEWSVMNESKTPRGNTIVQLIQSLDFWNRGKEVIASLEPLIS 900
             L+S+++ ED L+      +W     S+ P    I  L+    FW    E+I   EPL+ 
Sbjct: 369  TLRSIVNQEDDLKHFFSHADWLSSVHSRRPDALAIKSLLYLERFWKSAHEIIGMSEPLLK 428

Query: 899  VLHLVDGEGSTAGYLYEAMEQVRVEFKQRCSNDESKSLKLLKIFDSRRGDIVHK-IHAAA 723
            +L LVDG+    GY+YE +E+ ++  K      E K + +L+I + R     H  +HAAA
Sbjct: 429  LLRLVDGDMPAMGYIYEGIERAKMAIKAFYKGCEEKYMSVLEIIERRWSMHCHSHLHAAA 488

Query: 722  SFLNPSLMYDGKIKYEQPDIRDGMNYVVEHMVC-SSEMDDFISQLLLYNGKSSKLFNTLS 546
            +FLNPS+ YD   K++  ++R+G +  +  M    ++  + I    +Y      L +  +
Sbjct: 489  AFLNPSIFYDPSFKFD-VNMRNGFHAAMWKMFPEENDRIELIKDQPVYIKAQGALGSKFA 547

Query: 545  VLMMKKAHPRVWWEYNGSEVPLLRKVAIRILSQPCSSSLCGRKWSAYEVARTMKANNSPE 366
            ++      P  WW   G E+P+L++ A+RILSQPCSS      WSA+E   T        
Sbjct: 548  IMGRTLNSPGDWWATYGYEIPVLQRAAVRILSQPCSSYWFKWNWSAFENIYTKNHTRMEL 607

Query: 365  STFEEIVYTRMNMMM 321
                ++V+   N+ +
Sbjct: 608  EKLNDLVFVHCNLRL 622


>ref|XP_004147940.1| PREDICTED: uncharacterized protein LOC101222344 [Cucumis sativus]
          Length = 673

 Score =  237 bits (604), Expect = 8e-60
 Identities = 139/437 (31%), Positives = 228/437 (52%), Gaps = 4/437 (0%)
 Frame = -3

Query: 1619 LLRDVRKEVNEYVSAIKASWSLTGCTLMSDTWTDSENHSFITLIAYSPKGAVFLKSFEST 1440
            LL  V+ +++      +  W  TGCT++ D+W+D +  SF+ +     KG +FLKS + +
Sbjct: 188  LLDKVKGDIHSSYKKHRDEWKETGCTILCDSWSDGQTKSFLVISVTCSKGTLFLKSVDIS 247

Query: 1439 DSTIAGDFLEDILLSIVDEIGSENVVQIIVNKVSCGEYAMDLVAENYPHIYRTKCASHGF 1260
                   +L D+L +I+ E+G ENVVQII +  +   YA  L+   Y  ++ + C S+  
Sbjct: 248  GHEDDATYLSDLLETIILEVGVENVVQIITDATASYVYAGRLLMTKYTSLFWSPCVSYCV 307

Query: 1259 QQMLEDIYENVEWIQSAFDDAKSIVDYLYKYPLVLKSMQVHKPDKELKRPCETTCASYFV 1080
             QMLEDI   +EW+ +  ++AK I  Y+Y +  +L +M+     KEL RP  T   + F+
Sbjct: 308  NQMLEDI-SKIEWVSAVLEEAKIITRYIYSHASILNTMRKFTGGKELIRPRITRFVTNFL 366

Query: 1079 MLQSLIDFEDCLRTIVVSPEWSVMNESKTPRGNTIVQLIQSLDFWNRGKEVIASLEPLIS 900
             L+S++  ED L+ +    EW     S+ P    I+ L+    FW    E I   EPLI 
Sbjct: 367  SLRSIVILEDNLKHMFAHSEWLSSIYSRRPDAQAIISLLYLDRFWKDAHEAINICEPLIR 426

Query: 899  VLHLVDGEGSTAGYLYEAMEQVRVEFKQRCSNDESKSLKLLKIFDSRRGDIVH-KIHAAA 723
            +L +VDG+    GY++E +E+ +VE K   +  E K + + +  D R    +H  +H AA
Sbjct: 427  ILRIVDGDMPAMGYIFEGIERAKVEIKTYYNGFEDKYMPIWETIDRRWNLQLHTTLHTAA 486

Query: 722  SFLNPSLMYDGKIKYEQPDIRDGMNYVVEHMVCS--SEMDDFISQLLLYNGKSSKLFNTL 549
            +FLNPS+ Y+   K +   IR+G    +  M  +   +M+         NG+ + L    
Sbjct: 487  AFLNPSVFYNPNFKIDL-RIRNGFQEAMLKMATTDKDKMEITREHPAYVNGQGA-LGTDF 544

Query: 548  SVLMMKKAHPRVWWEYNGSEVPLLRKVAIRILSQPCSSSLC-GRKWSAYEVARTMKANNS 372
            ++L      P  WW   G E+P L++ A+RILSQPCSS  C G  WS +E   + K + +
Sbjct: 545  AILGRTINAPGDWWSGYGYEIPTLQRAAVRILSQPCSSYGCSGWNWSTFETLHSKKHSRA 604

Query: 371  PESTFEEIVYTRMNMMM 321
             +    ++V+ + N+ +
Sbjct: 605  EQEKLTDLVFVQCNLWL 621


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