BLASTX nr result

ID: Coptis24_contig00008918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008918
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38498.1| unknown [Lotus japonicus]                              124   8e-27
emb|CBI23598.3| unnamed protein product [Vitis vinifera]              122   4e-26
emb|CBI23599.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_003529012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   118   6e-25
ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   117   8e-25

>gb|AFK38498.1| unknown [Lotus japonicus]
          Length = 374

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/74 (74%), Positives = 66/74 (89%)
 Frame = +3

Query: 3   HSDPDFFTVLLQDHLGGLQVHHENQWVDVSPLRGGLIINIGDILQLVSNNKLKSSEHRVL 182
           HSDPDFFT+LLQDH+GGLQV ++NQWVDV P+ G L+IN+GDILQL+SN+K KS+ HRVL
Sbjct: 246 HSDPDFFTILLQDHIGGLQVLYQNQWVDVKPVDGALVINLGDILQLISNDKFKSARHRVL 305

Query: 183 AKREGPRISVACFF 224
           A + GPRISVACFF
Sbjct: 306 ANKVGPRISVACFF 319


>emb|CBI23598.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/75 (73%), Positives = 65/75 (86%)
 Frame = +3

Query: 3   HSDPDFFTVLLQDHLGGLQVHHENQWVDVSPLRGGLIINIGDILQLVSNNKLKSSEHRVL 182
           HSD DF T+LLQD LGGLQV HENQWVDV P+ G LI+N+GD LQL++N+KLKS  HRV+
Sbjct: 130 HSDADFMTILLQDQLGGLQVFHENQWVDVPPIPGALIVNVGDFLQLLTNDKLKSVHHRVI 189

Query: 183 AKREGPRISVACFFR 227
           AK++GPRISVACFFR
Sbjct: 190 AKQKGPRISVACFFR 204


>emb|CBI23599.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/75 (73%), Positives = 63/75 (84%)
 Frame = +3

Query: 3   HSDPDFFTVLLQDHLGGLQVHHENQWVDVSPLRGGLIINIGDILQLVSNNKLKSSEHRVL 182
           HSD DF TV LQD LGGLQV HENQWVDV P+ G LI+N+GD LQL++N+KLKS  HRV+
Sbjct: 79  HSDADFMTVRLQDQLGGLQVCHENQWVDVPPIPGALIVNVGDFLQLLTNDKLKSVNHRVI 138

Query: 183 AKREGPRISVACFFR 227
           AK+ GPRISVACFFR
Sbjct: 139 AKQAGPRISVACFFR 153


>ref|XP_003529012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog
           12-like [Glycine max]
          Length = 365

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/76 (67%), Positives = 65/76 (85%)
 Frame = +3

Query: 3   HSDPDFFTVLLQDHLGGLQVHHENQWVDVSPLRGGLIINIGDILQLVSNNKLKSSEHRVL 182
           HSD DFFTVLLQDH+GGLQV +E++W+D+SP+ G  +INIGD+LQ ++N++ KS+EHRVL
Sbjct: 238 HSDNDFFTVLLQDHIGGLQVRYEDKWIDISPVPGAFVINIGDLLQFITNDRFKSAEHRVL 297

Query: 183 AKREGPRISVACFFRP 230
           A   GPRISVACFF P
Sbjct: 298 ANDVGPRISVACFFSP 313


>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score =  117 bits (294), Expect = 8e-25
 Identities = 53/74 (71%), Positives = 62/74 (83%)
 Frame = +3

Query: 3   HSDPDFFTVLLQDHLGGLQVHHENQWVDVSPLRGGLIINIGDILQLVSNNKLKSSEHRVL 182
           HSDPDF T+LLQDH+GGLQV   N WVDV P+ G L++NIGD+LQL+SN+K KS EHRVL
Sbjct: 245 HSDPDFLTILLQDHIGGLQVLSHNGWVDVPPVPGALVVNIGDLLQLISNDKFKSVEHRVL 304

Query: 183 AKREGPRISVACFF 224
           A R GPR+SVACFF
Sbjct: 305 ANRIGPRVSVACFF 318


Top