BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008916
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   187   2e-45
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             184   8e-45
emb|CAN79755.1| hypothetical protein VITISV_006035 [Vitis vinifera]   184   1e-44
emb|CAN70585.1| hypothetical protein VITISV_013305 [Vitis vinifera]   182   4e-44
emb|CAN84122.1| hypothetical protein VITISV_005635 [Vitis vinifera]   182   5e-44

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  187 bits (474), Expect = 2e-45
 Identities = 94/195 (48%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
 Frame = +2

Query: 5    GQPYAIIADNGTQFTGSKVKGFLQMYHIKQGFSAPYNPERNGQAESSNKTILNNLKRKLE 184
            G PY I+ DNGTQFT  + +GF   + I+   S P  P+ NGQAE++NKTIL+ LK++L+
Sbjct: 1560 GLPYEIVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQAEATNKTILDGLKKRLD 1619

Query: 185  GKKGSWADELSRVLWAYRTTPRTSTDETPFALAYGVEAVIPTEMVAATTRTAAV--EDKS 358
             KKG+WADEL  VLW+YRTTPR STD TPF+L YG+EA+ P E    T R + +  +   
Sbjct: 1620 EKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRRSMLINDPTL 1679

Query: 359  NWGILARDLNLAEERRDTARIRLEEYHRRLQRQYGKKLRVRRFAVGDKVLRRVTPSTKKA 538
            N  +L  +L+  EE+RD A +R++ Y +   + Y KK++ R FA GD VLR+V  +T + 
Sbjct: 1680 NDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQ 1739

Query: 539  SEGKLGPAWEGPYVV 583
              GKLG  WEGPY++
Sbjct: 1740 DAGKLGAHWEGPYLI 1754


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  184 bits (468), Expect = 8e-45
 Identities = 96/202 (47%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
 Frame = +2

Query: 5    GQPYAIIADNGTQFTGSKVKGFLQMYHIKQGFSAPYNPERNGQAESSNKTILNNLKRKLE 184
            G PY I+ DNG QF   +   F   + IK  +S P  P+ NGQAE++NKTIL+NLK++L 
Sbjct: 876  GVPYEIVTDNGPQFISHEFDAFCADWGIKVSYSTPRYPQGNGQAEAANKTILSNLKKRLN 935

Query: 185  GKKGSWADELSRVLWAYRTTPRTSTDETPFALAYGVEAVIPTEM-VAATTRT-AAVEDKS 358
              KG W +EL  VLWAYRTTPR  T ETPF+L YG+EAV+P E+ V    RT A + ++ 
Sbjct: 936  HLKGGWYEELQPVLWAYRTTPRRPTGETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEE 995

Query: 359  NWGILARDLNLAEERRDTARIRLEEYHRRLQRQYGKKLRVRRFAVGDKVLRRVTPSTKKA 538
            N  +L   L+   ERRD A IR++ Y +   R Y  K++ R F VGD VLRRV  + K+ 
Sbjct: 996  NSAMLNDSLDTINERRDQALIRIQNYQQAAARYYNSKVKSRPFFVGDYVLRRVFDNKKEE 1055

Query: 539  SEGKLGPAWEGPYVVVGIGGTG 604
              GKLG  WEGPY++  +   G
Sbjct: 1056 GAGKLGINWEGPYIITEVVRNG 1077


>emb|CAN79755.1| hypothetical protein VITISV_006035 [Vitis vinifera]
          Length = 665

 Score =  184 bits (466), Expect = 1e-44
 Identities = 93/194 (47%), Positives = 124/194 (63%)
 Frame = +2

Query: 2    FGQPYAIIADNGTQFTGSKVKGFLQMYHIKQGFSAPYNPERNGQAESSNKTILNNLKRKL 181
            FG P  IIADNG QF     + F    +I+  +S P  P+ NGQAE++NKT++N LK++L
Sbjct: 439  FGIPQIIIADNGPQFDNIAFRNFYSELNIRNLYSTPRYPQSNGQAEATNKTLINALKKRL 498

Query: 182  EGKKGSWADELSRVLWAYRTTPRTSTDETPFALAYGVEAVIPTEMVAATTRTAAVEDKSN 361
            E  KG W +EL  VLWAYRTTP   T  TPFAL YG++AVIPTE+   TTRT A + K  
Sbjct: 499  EQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALTYGMDAVIPTEIGLPTTRTDAAKQKDA 558

Query: 362  WGILARDLNLAEERRDTARIRLEEYHRRLQRQYGKKLRVRRFAVGDKVLRRVTPSTKKAS 541
               L R+L+ A+E R++A IR+ +Y +R    Y +K+R R+F  G  VLR+V  +T +  
Sbjct: 559  NTELGRNLDWADEVRESAAIRMADYQQRASAHYNRKVRPRKFKNGTLVLRKVFENTTEVG 618

Query: 542  EGKLGPAWEGPYVV 583
             GK    WEGPY+V
Sbjct: 619  AGKFQANWEGPYIV 632


>emb|CAN70585.1| hypothetical protein VITISV_013305 [Vitis vinifera]
          Length = 1027

 Score =  182 bits (462), Expect = 4e-44
 Identities = 92/194 (47%), Positives = 122/194 (62%)
 Frame = +2

Query: 2    FGQPYAIIADNGTQFTGSKVKGFLQMYHIKQGFSAPYNPERNGQAESSNKTILNNLKRKL 181
            FG P  IIADNG QF     + F    +I+  +S P  P+ NGQAE++NKT++N LK++L
Sbjct: 801  FGIPQIIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLINALKKRL 860

Query: 182  EGKKGSWADELSRVLWAYRTTPRTSTDETPFALAYGVEAVIPTEMVAATTRTAAVEDKSN 361
            E  KG W +EL  VLWAYRTTP   T  TPFAL YG++AVIPTE+   T RT A + K  
Sbjct: 861  EQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALTYGMDAVIPTEIGLPTIRTDAAKQKDA 920

Query: 362  WGILARDLNLAEERRDTARIRLEEYHRRLQRQYGKKLRVRRFAVGDKVLRRVTPSTKKAS 541
               L R+L+ A+E R++A IR+ +Y +R    Y +K+R R F  G  VLR+V  +T +  
Sbjct: 921  BTELGRNLDWADEVRESASIRMADYQQRASAHYNRKVRPRNFKNGTLVLRKVFENTAEVG 980

Query: 542  EGKLGPAWEGPYVV 583
             GK    WEGPY+V
Sbjct: 981  AGKFQANWEGPYIV 994


>emb|CAN84122.1| hypothetical protein VITISV_005635 [Vitis vinifera]
          Length = 977

 Score =  182 bits (461), Expect = 5e-44
 Identities = 91/194 (46%), Positives = 123/194 (63%)
 Frame = +2

Query: 2    FGQPYAIIADNGTQFTGSKVKGFLQMYHIKQGFSAPYNPERNGQAESSNKTILNNLKRKL 181
            FG P  IIADNG QF     + F    +I+  +S P  P+ NGQAE++NKT++N LK++L
Sbjct: 751  FGIPQIIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLINALKKRL 810

Query: 182  EGKKGSWADELSRVLWAYRTTPRTSTDETPFALAYGVEAVIPTEMVAATTRTAAVEDKSN 361
            E  KG W +EL  VLWAYRTTP   T  TPFAL YG++AVIPTE+   TTRT A + +  
Sbjct: 811  EQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALTYGMDAVIPTEIGLPTTRTDAAKQEBA 870

Query: 362  WGILARDLNLAEERRDTARIRLEEYHRRLQRQYGKKLRVRRFAVGDKVLRRVTPSTKKAS 541
               L R+L+ A+E R++A IR+ +Y +R    Y +K++ R F  G  VLR+V  +T +  
Sbjct: 871  NTELGRNLDWADEVRESAXIRMADYQQRASAHYNRKVKPRNFKNGTLVLRKVFENTAEVG 930

Query: 542  EGKLGPAWEGPYVV 583
             GK    WEGPY+V
Sbjct: 931  AGKFQANWEGPYIV 944