BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008908
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
emb|CBI27235.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   131   5e-29
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...   131   6e-29
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 131   6e-29

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/79 (77%), Positives = 67/79 (84%)
 Frame = +2

Query: 2   GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181
           GVKKEPGCSWIE RDEVHKF  GD  H QS+Q+  FLE L  +MRKEGY+PDTSCVLHN+
Sbjct: 757 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNV 816

Query: 182 DEEEKEYLLCGHSEKLAIA 238
           DE+EKE LLCGHSEKLAIA
Sbjct: 817 DEDEKENLLCGHSEKLAIA 835


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/79 (77%), Positives = 67/79 (84%)
 Frame = +2

Query: 2   GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181
           GVKKEPGCSWIE RDEVHKF  GD  H QS+Q+  FLE L  +MRKEGY+PDTSCVLHN+
Sbjct: 557 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNV 616

Query: 182 DEEEKEYLLCGHSEKLAIA 238
           DE+EKE LLCGHSEKLAIA
Sbjct: 617 DEDEKENLLCGHSEKLAIA 635


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/79 (73%), Positives = 69/79 (87%)
 Frame = +2

Query: 2   GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181
           GV+KEPGCSWIE  DEVHKF  GD+ H QS++++ +LE LW RMRKEGY+PDTSCVLHN+
Sbjct: 747 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNV 806

Query: 182 DEEEKEYLLCGHSEKLAIA 238
           +E+EKE LLCGHSEKLAIA
Sbjct: 807 EEDEKEILLCGHSEKLAIA 825


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = +2

Query: 2   GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181
           GV+KEPGCSWIE  DEVHKF  GD+ H QS+++  +LE LW RMRKEGY+PDTSCVLHN+
Sbjct: 751 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNV 810

Query: 182 DEEEKEYLLCGHSEKLAIA 238
           +E+EKE LLCGHSEKLAIA
Sbjct: 811 EEDEKEILLCGHSEKLAIA 829


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = +2

Query: 2   GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181
           GV+KEPGCSWIE  DEVHKF  GD+ H QS+++  +LE LW RMRKEGY+PDTSCVLHN+
Sbjct: 751 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNV 810

Query: 182 DEEEKEYLLCGHSEKLAIA 238
           +E+EKE LLCGHSEKLAIA
Sbjct: 811 EEDEKEILLCGHSEKLAIA 829