BLASTX nr result
ID: Coptis24_contig00008908
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008908 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 132 2e-29 emb|CBI27235.3| unnamed protein product [Vitis vinifera] 132 2e-29 ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab... 131 5e-29 ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar... 131 6e-29 gb|AAP40452.1| unknown protein [Arabidopsis thaliana] 131 6e-29 >ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Vitis vinifera] Length = 896 Score = 132 bits (333), Expect = 2e-29 Identities = 61/79 (77%), Positives = 67/79 (84%) Frame = +2 Query: 2 GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181 GVKKEPGCSWIE RDEVHKF GD H QS+Q+ FLE L +MRKEGY+PDTSCVLHN+ Sbjct: 757 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNV 816 Query: 182 DEEEKEYLLCGHSEKLAIA 238 DE+EKE LLCGHSEKLAIA Sbjct: 817 DEDEKENLLCGHSEKLAIA 835 >emb|CBI27235.3| unnamed protein product [Vitis vinifera] Length = 696 Score = 132 bits (333), Expect = 2e-29 Identities = 61/79 (77%), Positives = 67/79 (84%) Frame = +2 Query: 2 GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181 GVKKEPGCSWIE RDEVHKF GD H QS+Q+ FLE L +MRKEGY+PDTSCVLHN+ Sbjct: 557 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNV 616 Query: 182 DEEEKEYLLCGHSEKLAIA 238 DE+EKE LLCGHSEKLAIA Sbjct: 617 DEDEKENLLCGHSEKLAIA 635 >ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata] Length = 886 Score = 131 bits (330), Expect = 5e-29 Identities = 58/79 (73%), Positives = 69/79 (87%) Frame = +2 Query: 2 GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181 GV+KEPGCSWIE DEVHKF GD+ H QS++++ +LE LW RMRKEGY+PDTSCVLHN+ Sbjct: 747 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNV 806 Query: 182 DEEEKEYLLCGHSEKLAIA 238 +E+EKE LLCGHSEKLAIA Sbjct: 807 EEDEKEILLCGHSEKLAIA 825 >ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 890 Score = 131 bits (329), Expect = 6e-29 Identities = 58/79 (73%), Positives = 68/79 (86%) Frame = +2 Query: 2 GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181 GV+KEPGCSWIE DEVHKF GD+ H QS+++ +LE LW RMRKEGY+PDTSCVLHN+ Sbjct: 751 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNV 810 Query: 182 DEEEKEYLLCGHSEKLAIA 238 +E+EKE LLCGHSEKLAIA Sbjct: 811 EEDEKEILLCGHSEKLAIA 829 >gb|AAP40452.1| unknown protein [Arabidopsis thaliana] Length = 890 Score = 131 bits (329), Expect = 6e-29 Identities = 58/79 (73%), Positives = 68/79 (86%) Frame = +2 Query: 2 GVKKEPGCSWIELRDEVHKFTVGDALHTQSQQIQEFLEGLWVRMRKEGYMPDTSCVLHNI 181 GV+KEPGCSWIE DEVHKF GD+ H QS+++ +LE LW RMRKEGY+PDTSCVLHN+ Sbjct: 751 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNV 810 Query: 182 DEEEKEYLLCGHSEKLAIA 238 +E+EKE LLCGHSEKLAIA Sbjct: 811 EEDEKEILLCGHSEKLAIA 829