BLASTX nr result
ID: Coptis24_contig00008904
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008904 (1507 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|2... 295 2e-77 ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|2... 289 2e-75 ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256... 252 2e-64 emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera] 252 2e-64 ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu... 243 1e-61 >ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa] Length = 318 Score = 295 bits (755), Expect = 2e-77 Identities = 178/339 (52%), Positives = 195/339 (57%), Gaps = 1/339 (0%) Frame = -3 Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDIXXXXXXXXXXXXXPHLTTTT 837 MRE+++NWF+RWEEELP+ +ELMP++QTLITPDLA+AFDI TTTT Sbjct: 1 MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSN-----------TTTT 49 Query: 836 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDFDSGELGSGMNGDEP 657 DS ELGSG GDEP Sbjct: 50 TTTNNHNSSLHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDFAADSSELGSGAAGDEP 109 Query: 656 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 477 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM+VDGLTRENVASHLQKYRLY Sbjct: 110 -RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLY 168 Query: 476 LKRMQGLSSXXXXXXXXXXXGAISAADAATDHLFASTAVPHHFLHPGRPNSDQHFMPFVP 297 LKRMQGLSS G DAATDHLFAS+ VP HFLHPGRPNSD HF+PFVP Sbjct: 169 LKRMQGLSSGGGGNGTGGGGGLTGGTDAATDHLFASSPVPAHFLHPGRPNSD-HFLPFVP 227 Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFGSPPSGQFENGFLPRQ-PQPMHRIAVP 120 FGSP +GQFE+ FLPRQ QP+HR+ P Sbjct: 228 -VAALQNHHHQHQMAAMGHPQLPSQYHRQMGHFGSPTNGQFEHPFLPRQTQQPVHRMGAP 286 Query: 119 VPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVLTLFP 3 VP P YVEDL+S GRKVLTLFP Sbjct: 287 VPNTVPGYVEDLES-----------VNGNGGRKVLTLFP 314 >ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa] Length = 323 Score = 289 bits (739), Expect = 2e-75 Identities = 178/347 (51%), Positives = 196/347 (56%), Gaps = 9/347 (2%) Frame = -3 Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDIXXXXXXXXXXXXXPHLTTTT 837 MRE+++NWF+RWEEELP+ +ELMP++QTLITPDLA+AFDI T T Sbjct: 1 MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDI----------------TNPT 44 Query: 836 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDF--DSGELGSGMNGD 663 DF DSGELGSG GD Sbjct: 45 NTTNTNNHNSSLHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDFATDSGELGSGAGGD 104 Query: 662 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 483 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM+VDGLTRENVASHLQKYR Sbjct: 105 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYR 164 Query: 482 LYLKRMQGLSSXXXXXXXXXXXGA---ISAADAATDHLFASTAVPHHFLHPGRPNSDQHF 312 LYLKRMQGLSS G +DAATDHLFAS+ VP HFLHPGRPNSD HF Sbjct: 165 LYLKRMQGLSSGGGGPGNGAVGGGGGLTGGSDAATDHLFASSPVPAHFLHPGRPNSD-HF 223 Query: 311 MPFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ---FGSPPSGQFENGFLPRQPQ- 144 +PFVP FGSP +GQFE+ FL RQ Q Sbjct: 224 LPFVPVAALQQHHHQQQMAAAAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLARQTQQ 283 Query: 143 PMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVLTLFP 3 P+HR+ PV P YVEDL+S GRKVLTLFP Sbjct: 284 PVHRMGAPVHNAVPGYVEDLES-----------ANGNEGRKVLTLFP 319 >ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis vinifera] gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis vinifera] Length = 306 Score = 252 bits (643), Expect = 2e-64 Identities = 142/244 (58%), Positives = 159/244 (65%), Gaps = 10/244 (4%) Frame = -3 Query: 704 DFDSGELGSGMNGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 525 +FDSG+LGSG GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG Sbjct: 71 EFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 130 Query: 524 LTRENVASHLQKYRLYLKRMQGLSS---XXXXXXXXXXXGAISAADAATDHLFASTAVPH 354 LTRENVASHLQKYRLYLKRMQGLS+ ++AAD ATDHLFAS+ VP Sbjct: 131 LTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDHLFASSPVPP 190 Query: 353 HFLHPGRPNSDQHFMPFVP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFG 195 HFLHPGR +S +HF+PFVP FG Sbjct: 191 HFLHPGRASS-EHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHHHRQVGHFG 249 Query: 194 SPPSGQFENGFLPRQPQPMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVL 15 SPP+GQFE+ FLPRQ QP+HR+ PV + P+YVEDL+S GR+VL Sbjct: 250 SPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLES-----------ATATGGRRVL 298 Query: 14 TLFP 3 TLFP Sbjct: 299 TLFP 302 Score = 78.6 bits (192), Expect = 4e-12 Identities = 33/40 (82%), Positives = 40/40 (100%) Frame = -3 Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDI 897 MREEE+NWF+RWEEELP+P+ELMP++QTLITPDLA+AFDI Sbjct: 1 MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDI 40 >emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera] Length = 306 Score = 252 bits (643), Expect = 2e-64 Identities = 142/244 (58%), Positives = 159/244 (65%), Gaps = 10/244 (4%) Frame = -3 Query: 704 DFDSGELGSGMNGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 525 +FDSG+LGSG GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG Sbjct: 71 EFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 130 Query: 524 LTRENVASHLQKYRLYLKRMQGLSS---XXXXXXXXXXXGAISAADAATDHLFASTAVPH 354 LTRENVASHLQKYRLYLKRMQGLS+ ++AAD ATDHLFAS+ VP Sbjct: 131 LTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDHLFASSPVPP 190 Query: 353 HFLHPGRPNSDQHFMPFVP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFG 195 HFLHPGR +S +HF+PFVP FG Sbjct: 191 HFLHPGRASS-EHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHHHRQVGHFG 249 Query: 194 SPPSGQFENGFLPRQPQPMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVL 15 SPP+GQFE+ FLPRQ QP+HR+ PV + P+YVEDL+S GR+VL Sbjct: 250 SPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLES-----------ATATGGRRVL 298 Query: 14 TLFP 3 TLFP Sbjct: 299 TLFP 302 Score = 78.6 bits (192), Expect = 4e-12 Identities = 33/40 (82%), Positives = 40/40 (100%) Frame = -3 Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDI 897 MREEE+NWF+RWEEELP+P+ELMP++QTLITPDLA+AFDI Sbjct: 1 MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDI 40 >ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis] gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis] Length = 315 Score = 243 bits (619), Expect = 1e-61 Identities = 143/239 (59%), Positives = 154/239 (64%), Gaps = 7/239 (2%) Frame = -3 Query: 698 DSGELGSGMNGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 519 DS +LGS GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT Sbjct: 85 DSADLGSAGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 144 Query: 518 RENVASHLQKYRLYLKRMQGLSS--XXXXXXXXXXXGAISAADAATDHLFASTAVPHHFL 345 RENVASHLQKYRLYLKRMQGLSS G +A+DAAT+HLFAS+ VP HFL Sbjct: 145 RENVASHLQKYRLYLKRMQGLSSGGAAGVNGSAGGGGGAAASDAATEHLFASSPVPAHFL 204 Query: 344 HPGRPNSDQHFMPFVP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFGSPPSGQ 177 HPGRPNSD HF+PFVP FGSPP+GQ Sbjct: 205 HPGRPNSD-HFLPFVPVAALQHHHHQQQMAAAAAAAVAHPQLQSQYHRQMGHFGSPPNGQ 263 Query: 176 FENGFLPRQ-PQPMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVLTLFP 3 F++ FL RQ QP+HRI PV P YVEDL+S GRKVLTLFP Sbjct: 264 FDHPFLARQSQQPVHRIGAPVHNTVPGYVEDLES-----------ANGNGGRKVLTLFP 311 Score = 75.9 bits (185), Expect = 3e-11 Identities = 31/40 (77%), Positives = 40/40 (100%) Frame = -3 Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDI 897 MRE+++NWF++WEEELP+P+ELMP++QTLITPDLAIAFDI Sbjct: 1 MREDDSNWFSKWEEELPSPEELMPLSQTLITPDLAIAFDI 40