BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008904
         (1507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|2...   295   2e-77
ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|2...   289   2e-75
ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256...   252   2e-64
emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]   252   2e-64
ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu...   243   1e-61

>ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|222854845|gb|EEE92392.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  295 bits (755), Expect = 2e-77
 Identities = 178/339 (52%), Positives = 195/339 (57%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDIXXXXXXXXXXXXXPHLTTTT 837
            MRE+++NWF+RWEEELP+ +ELMP++QTLITPDLA+AFDI                TTTT
Sbjct: 1    MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSN-----------TTTT 49

Query: 836  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDFDSGELGSGMNGDEP 657
                                                          DS ELGSG  GDEP
Sbjct: 50   TTTNNHNSSLHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDFAADSSELGSGAAGDEP 109

Query: 656  ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 477
             RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM+VDGLTRENVASHLQKYRLY
Sbjct: 110  -RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLY 168

Query: 476  LKRMQGLSSXXXXXXXXXXXGAISAADAATDHLFASTAVPHHFLHPGRPNSDQHFMPFVP 297
            LKRMQGLSS           G     DAATDHLFAS+ VP HFLHPGRPNSD HF+PFVP
Sbjct: 169  LKRMQGLSSGGGGNGTGGGGGLTGGTDAATDHLFASSPVPAHFLHPGRPNSD-HFLPFVP 227

Query: 296  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFGSPPSGQFENGFLPRQ-PQPMHRIAVP 120
                                            FGSP +GQFE+ FLPRQ  QP+HR+  P
Sbjct: 228  -VAALQNHHHQHQMAAMGHPQLPSQYHRQMGHFGSPTNGQFEHPFLPRQTQQPVHRMGAP 286

Query: 119  VPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVLTLFP 3
            VP   P YVEDL+S                GRKVLTLFP
Sbjct: 287  VPNTVPGYVEDLES-----------VNGNGGRKVLTLFP 314


>ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|222872755|gb|EEF09886.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  289 bits (739), Expect = 2e-75
 Identities = 178/347 (51%), Positives = 196/347 (56%), Gaps = 9/347 (2%)
 Frame = -3

Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDIXXXXXXXXXXXXXPHLTTTT 837
            MRE+++NWF+RWEEELP+ +ELMP++QTLITPDLA+AFDI                T  T
Sbjct: 1    MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDI----------------TNPT 44

Query: 836  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDF--DSGELGSGMNGD 663
                                                        DF  DSGELGSG  GD
Sbjct: 45   NTTNTNNHNSSLHQNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDFATDSGELGSGAGGD 104

Query: 662  EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 483
            EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM+VDGLTRENVASHLQKYR
Sbjct: 105  EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYR 164

Query: 482  LYLKRMQGLSSXXXXXXXXXXXGA---ISAADAATDHLFASTAVPHHFLHPGRPNSDQHF 312
            LYLKRMQGLSS           G       +DAATDHLFAS+ VP HFLHPGRPNSD HF
Sbjct: 165  LYLKRMQGLSSGGGGPGNGAVGGGGGLTGGSDAATDHLFASSPVPAHFLHPGRPNSD-HF 223

Query: 311  MPFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ---FGSPPSGQFENGFLPRQPQ- 144
            +PFVP                                   FGSP +GQFE+ FL RQ Q 
Sbjct: 224  LPFVPVAALQQHHHQQQMAAAAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLARQTQQ 283

Query: 143  PMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVLTLFP 3
            P+HR+  PV    P YVEDL+S                GRKVLTLFP
Sbjct: 284  PVHRMGAPVHNAVPGYVEDLES-----------ANGNEGRKVLTLFP 319


>ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
           vinifera] gi|359481436|ref|XP_003632618.1| PREDICTED:
           uncharacterized protein LOC100256764 isoform 2 [Vitis
           vinifera]
          Length = 306

 Score =  252 bits (643), Expect = 2e-64
 Identities = 142/244 (58%), Positives = 159/244 (65%), Gaps = 10/244 (4%)
 Frame = -3

Query: 704 DFDSGELGSGMNGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 525
           +FDSG+LGSG  GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG
Sbjct: 71  EFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 130

Query: 524 LTRENVASHLQKYRLYLKRMQGLSS---XXXXXXXXXXXGAISAADAATDHLFASTAVPH 354
           LTRENVASHLQKYRLYLKRMQGLS+                ++AAD ATDHLFAS+ VP 
Sbjct: 131 LTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDHLFASSPVPP 190

Query: 353 HFLHPGRPNSDQHFMPFVP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFG 195
           HFLHPGR +S +HF+PFVP                                       FG
Sbjct: 191 HFLHPGRASS-EHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHHHRQVGHFG 249

Query: 194 SPPSGQFENGFLPRQPQPMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVL 15
           SPP+GQFE+ FLPRQ QP+HR+  PV +  P+YVEDL+S                GR+VL
Sbjct: 250 SPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLES-----------ATATGGRRVL 298

Query: 14  TLFP 3
           TLFP
Sbjct: 299 TLFP 302



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 33/40 (82%), Positives = 40/40 (100%)
 Frame = -3

Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDI 897
            MREEE+NWF+RWEEELP+P+ELMP++QTLITPDLA+AFDI
Sbjct: 1    MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDI 40


>emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
          Length = 306

 Score =  252 bits (643), Expect = 2e-64
 Identities = 142/244 (58%), Positives = 159/244 (65%), Gaps = 10/244 (4%)
 Frame = -3

Query: 704 DFDSGELGSGMNGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 525
           +FDSG+LGSG  GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG
Sbjct: 71  EFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDG 130

Query: 524 LTRENVASHLQKYRLYLKRMQGLSS---XXXXXXXXXXXGAISAADAATDHLFASTAVPH 354
           LTRENVASHLQKYRLYLKRMQGLS+                ++AAD ATDHLFAS+ VP 
Sbjct: 131 LTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDHLFASSPVPP 190

Query: 353 HFLHPGRPNSDQHFMPFVP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFG 195
           HFLHPGR +S +HF+PFVP                                       FG
Sbjct: 191 HFLHPGRASS-EHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHHHRQVGHFG 249

Query: 194 SPPSGQFENGFLPRQPQPMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVL 15
           SPP+GQFE+ FLPRQ QP+HR+  PV +  P+YVEDL+S                GR+VL
Sbjct: 250 SPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLES-----------ATATGGRRVL 298

Query: 14  TLFP 3
           TLFP
Sbjct: 299 TLFP 302



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 33/40 (82%), Positives = 40/40 (100%)
 Frame = -3

Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDI 897
            MREEE+NWF+RWEEELP+P+ELMP++QTLITPDLA+AFDI
Sbjct: 1    MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDI 40


>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
           gi|223543538|gb|EEF45068.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  243 bits (619), Expect = 1e-61
 Identities = 143/239 (59%), Positives = 154/239 (64%), Gaps = 7/239 (2%)
 Frame = -3

Query: 698 DSGELGSGMNGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 519
           DS +LGS   GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT
Sbjct: 85  DSADLGSAGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 144

Query: 518 RENVASHLQKYRLYLKRMQGLSS--XXXXXXXXXXXGAISAADAATDHLFASTAVPHHFL 345
           RENVASHLQKYRLYLKRMQGLSS             G  +A+DAAT+HLFAS+ VP HFL
Sbjct: 145 RENVASHLQKYRLYLKRMQGLSSGGAAGVNGSAGGGGGAAASDAATEHLFASSPVPAHFL 204

Query: 344 HPGRPNSDQHFMPFVP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFGSPPSGQ 177
           HPGRPNSD HF+PFVP                                    FGSPP+GQ
Sbjct: 205 HPGRPNSD-HFLPFVPVAALQHHHHQQQMAAAAAAAVAHPQLQSQYHRQMGHFGSPPNGQ 263

Query: 176 FENGFLPRQ-PQPMHRIAVPVPAHPPSYVEDLDSPIXXXXXXXXXXXXXXGRKVLTLFP 3
           F++ FL RQ  QP+HRI  PV    P YVEDL+S                GRKVLTLFP
Sbjct: 264 FDHPFLARQSQQPVHRIGAPVHNTVPGYVEDLES-----------ANGNGGRKVLTLFP 311



 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 40/40 (100%)
 Frame = -3

Query: 1016 MREEETNWFARWEEELPTPDELMPITQTLITPDLAIAFDI 897
            MRE+++NWF++WEEELP+P+ELMP++QTLITPDLAIAFDI
Sbjct: 1    MREDDSNWFSKWEEELPSPEELMPLSQTLITPDLAIAFDI 40