BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008903
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172134.1| PREDICTED: putative DNA repair protein RAD23...   124   1e-26
ref|XP_004135098.1| PREDICTED: putative DNA repair protein RAD23...   124   1e-26
ref|XP_002283661.1| PREDICTED: putative DNA repair protein RAD23...   121   7e-26
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23...   121   7e-26
gb|ABB02636.1| RAD23-like [Solanum tuberosum]                         120   9e-26

>ref|XP_004172134.1| PREDICTED: putative DNA repair protein RAD23-3-like [Cucumis
           sativus]
          Length = 407

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/74 (82%), Positives = 67/74 (90%)
 Frame = +2

Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283
           G+HFEIEV P DTVADVKK IETVQGADVYPAAQQMLIHQGKVLKD ++L EN V+EN+F
Sbjct: 10  GSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLEENKVAENSF 69

Query: 284 LVIMLTKNKVSSGG 325
           +VIMLTKNK SSGG
Sbjct: 70  IVIMLTKNKSSSGG 83


>ref|XP_004135098.1| PREDICTED: putative DNA repair protein RAD23-3-like [Cucumis
           sativus]
          Length = 407

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/74 (82%), Positives = 67/74 (90%)
 Frame = +2

Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283
           G+HFEIEV P DTVADVKK IETVQGADVYPAAQQMLIHQGKVLKD ++L EN V+EN+F
Sbjct: 10  GSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLEENKVAENSF 69

Query: 284 LVIMLTKNKVSSGG 325
           +VIMLTKNK SSGG
Sbjct: 70  IVIMLTKNKSSSGG 83


>ref|XP_002283661.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 2 [Vitis
           vinifera]
          Length = 361

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/74 (79%), Positives = 66/74 (89%)
 Frame = +2

Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283
           GTHFEIEV PEDTVADVKK IE V G DVYPAAQQMLIHQGKVLKD T+L EN V+E++F
Sbjct: 10  GTHFEIEVKPEDTVADVKKNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSF 69

Query: 284 LVIMLTKNKVSSGG 325
           +VIML+KNKVS+GG
Sbjct: 70  VVIMLSKNKVSAGG 83


>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
           vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/74 (79%), Positives = 66/74 (89%)
 Frame = +2

Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283
           GTHFEIEV PEDTVADVKK IE V G DVYPAAQQMLIHQGKVLKD T+L EN V+E++F
Sbjct: 10  GTHFEIEVKPEDTVADVKKNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSF 69

Query: 284 LVIMLTKNKVSSGG 325
           +VIML+KNKVS+GG
Sbjct: 70  VVIMLSKNKVSAGG 83


>gb|ABB02636.1| RAD23-like [Solanum tuberosum]
          Length = 384

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/74 (81%), Positives = 67/74 (90%)
 Frame = +2

Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283
           GTHFEIEV PEDTVADVKK+IETVQG DVYPAAQQMLIHQ KVLKD T+L EN V+EN+F
Sbjct: 10  GTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQVKVLKDPTTLDENKVAENSF 69

Query: 284 LVIMLTKNKVSSGG 325
           +VIML+KNKVS+ G
Sbjct: 70  VVIMLSKNKVSTSG 83