BLASTX nr result
ID: Coptis24_contig00008903
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008903 (327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004172134.1| PREDICTED: putative DNA repair protein RAD23... 124 1e-26 ref|XP_004135098.1| PREDICTED: putative DNA repair protein RAD23... 124 1e-26 ref|XP_002283661.1| PREDICTED: putative DNA repair protein RAD23... 121 7e-26 ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23... 121 7e-26 gb|ABB02636.1| RAD23-like [Solanum tuberosum] 120 9e-26 >ref|XP_004172134.1| PREDICTED: putative DNA repair protein RAD23-3-like [Cucumis sativus] Length = 407 Score = 124 bits (310), Expect = 1e-26 Identities = 61/74 (82%), Positives = 67/74 (90%) Frame = +2 Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283 G+HFEIEV P DTVADVKK IETVQGADVYPAAQQMLIHQGKVLKD ++L EN V+EN+F Sbjct: 10 GSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLEENKVAENSF 69 Query: 284 LVIMLTKNKVSSGG 325 +VIMLTKNK SSGG Sbjct: 70 IVIMLTKNKSSSGG 83 >ref|XP_004135098.1| PREDICTED: putative DNA repair protein RAD23-3-like [Cucumis sativus] Length = 407 Score = 124 bits (310), Expect = 1e-26 Identities = 61/74 (82%), Positives = 67/74 (90%) Frame = +2 Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283 G+HFEIEV P DTVADVKK IETVQGADVYPAAQQMLIHQGKVLKD ++L EN V+EN+F Sbjct: 10 GSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLEENKVAENSF 69 Query: 284 LVIMLTKNKVSSGG 325 +VIMLTKNK SSGG Sbjct: 70 IVIMLTKNKSSSGG 83 >ref|XP_002283661.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 2 [Vitis vinifera] Length = 361 Score = 121 bits (303), Expect = 7e-26 Identities = 59/74 (79%), Positives = 66/74 (89%) Frame = +2 Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283 GTHFEIEV PEDTVADVKK IE V G DVYPAAQQMLIHQGKVLKD T+L EN V+E++F Sbjct: 10 GTHFEIEVKPEDTVADVKKNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSF 69 Query: 284 LVIMLTKNKVSSGG 325 +VIML+KNKVS+GG Sbjct: 70 VVIMLSKNKVSAGG 83 >ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis vinifera] gi|296087286|emb|CBI33660.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 121 bits (303), Expect = 7e-26 Identities = 59/74 (79%), Positives = 66/74 (89%) Frame = +2 Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283 GTHFEIEV PEDTVADVKK IE V G DVYPAAQQMLIHQGKVLKD T+L EN V+E++F Sbjct: 10 GTHFEIEVKPEDTVADVKKNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSF 69 Query: 284 LVIMLTKNKVSSGG 325 +VIML+KNKVS+GG Sbjct: 70 VVIMLSKNKVSAGG 83 >gb|ABB02636.1| RAD23-like [Solanum tuberosum] Length = 384 Score = 120 bits (302), Expect = 9e-26 Identities = 60/74 (81%), Positives = 67/74 (90%) Frame = +2 Query: 104 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 283 GTHFEIEV PEDTVADVKK+IETVQG DVYPAAQQMLIHQ KVLKD T+L EN V+EN+F Sbjct: 10 GTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQVKVLKDPTTLDENKVAENSF 69 Query: 284 LVIMLTKNKVSSGG 325 +VIML+KNKVS+ G Sbjct: 70 VVIMLSKNKVSTSG 83