BLASTX nr result

ID: Coptis24_contig00008894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008894
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137209.1| PREDICTED: uncharacterized protein LOC101205...   150   8e-35
ref|XP_002510733.1| conserved hypothetical protein [Ricinus comm...   149   3e-34
ref|XP_002307000.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002275896.1| PREDICTED: uncharacterized protein LOC100259...   144   7e-33
ref|NP_001235308.1| uncharacterized protein LOC100527639 [Glycin...   140   1e-31

>ref|XP_004137209.1| PREDICTED: uncharacterized protein LOC101205325 isoform 1 [Cucumis
           sativus] gi|449438869|ref|XP_004137210.1| PREDICTED:
           uncharacterized protein LOC101205325 isoform 2 [Cucumis
           sativus] gi|449438871|ref|XP_004137211.1| PREDICTED:
           uncharacterized protein LOC101205325 isoform 3 [Cucumis
           sativus] gi|449483208|ref|XP_004156522.1| PREDICTED:
           uncharacterized LOC101205325 isoform 1 [Cucumis sativus]
           gi|449483212|ref|XP_004156523.1| PREDICTED:
           uncharacterized LOC101205325 isoform 2 [Cucumis sativus]
           gi|449483215|ref|XP_004156524.1| PREDICTED:
           uncharacterized LOC101205325 isoform 3 [Cucumis sativus]
          Length = 97

 Score =  150 bits (380), Expect = 8e-35
 Identities = 68/83 (81%), Positives = 79/83 (95%)
 Frame = +2

Query: 2   SNWRRTIGNIRSFIGNSTGGLRGGSNLASWAVAGTLAYFLWVKPSQNLKREQQEKALAAS 181
           S+WRR++GN+RSFIGNS GGLRGG+NLASW VAGTLAY+LWVKPSQ+LKREQQE+A  A+
Sbjct: 4   SSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALAA 63

Query: 182 LDPNRYIEKRKPIPDPQETGLIY 250
           +DP+RYIEKRKPIPDPQETGLIY
Sbjct: 64  VDPHRYIEKRKPIPDPQETGLIY 86


>ref|XP_002510733.1| conserved hypothetical protein [Ricinus communis]
           gi|223551434|gb|EEF52920.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/84 (80%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   SNWRRTIGNIRSFIGNSTGGLRGGSNLASWAVAGTLAYFLWVKPSQNLKREQQEK-ALAA 178
           SNWRRT+GN+RSFIGNS GGLRGGSN+ASW VAGTLAYFLW+KPSQ+L+REQ+E+ A+AA
Sbjct: 4   SNWRRTLGNVRSFIGNSMGGLRGGSNIASWVVAGTLAYFLWIKPSQDLRREQEERAAIAA 63

Query: 179 SLDPNRYIEKRKPIPDPQETGLIY 250
           + DP RY+EKRKPIPDPQETGLIY
Sbjct: 64  ASDPYRYVEKRKPIPDPQETGLIY 87


>ref|XP_002307000.1| predicted protein [Populus trichocarpa]
           gi|224148766|ref|XP_002336709.1| predicted protein
           [Populus trichocarpa] gi|222836564|gb|EEE74971.1|
           predicted protein [Populus trichocarpa]
           gi|222856449|gb|EEE93996.1| predicted protein [Populus
           trichocarpa]
          Length = 96

 Score =  148 bits (373), Expect = 5e-34
 Identities = 67/83 (80%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   SNWRRTIGNIRSFIGNSTGGLRGGSNLASWAVAGTLAYFLWVKPSQNLKREQQEKALAAS 181
           S WRRT+GN+RSFIGNS GGLRGGSN+ASW VAGTLAY+LW+KPSQ+LKR+Q+E+A  AS
Sbjct: 3   SGWRRTVGNVRSFIGNSLGGLRGGSNVASWIVAGTLAYYLWIKPSQDLKRQQEERAALAS 62

Query: 182 LDPNRYIEKRKPIPDPQETGLIY 250
            DP RYIEKRKPIPDPQETGLIY
Sbjct: 63  SDPYRYIEKRKPIPDPQETGLIY 85


>ref|XP_002275896.1| PREDICTED: uncharacterized protein LOC100259899 isoform 1 [Vitis
           vinifera] gi|297745609|emb|CBI40774.3| unnamed protein
           product [Vitis vinifera]
          Length = 97

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/84 (80%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   SNWRRTIGNIRSFIGNSTGGLRGGSNLASWAVAGTLAYFLWVKPSQNLKREQQEK-ALAA 178
           S+WRR++GN+RSFIGN  GGLRGGSNLASW VAGTLAYFLWVKPSQ L+REQ+E+ ALAA
Sbjct: 3   SSWRRSLGNMRSFIGNCMGGLRGGSNLASWVVAGTLAYFLWVKPSQELRREQEERAALAA 62

Query: 179 SLDPNRYIEKRKPIPDPQETGLIY 250
           + DP RY+EKRKPIPDPQETGLIY
Sbjct: 63  ASDPYRYVEKRKPIPDPQETGLIY 86


>ref|NP_001235308.1| uncharacterized protein LOC100527639 [Glycine max]
           gi|255632830|gb|ACU16768.1| unknown [Glycine max]
          Length = 100

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   SNWRRTIGNIRSFIGNSTGGLRGGSNLASWAVAGTLAYFLWVKPSQNLKREQQEKA--LA 175
           S+WRRT GN+RSF+ NS GGLRGGSNLASW VAGTLAYFLW+KPSQ+LKREQQEKA   A
Sbjct: 3   SSWRRTFGNMRSFVSNSMGGLRGGSNLASWVVAGTLAYFLWIKPSQDLKREQQEKAALAA 62

Query: 176 ASLDPNRYIEKRKPIPDPQETGLIY 250
           A  DP RY+E RKPIPDPQ TGLIY
Sbjct: 63  AESDPYRYVETRKPIPDPQVTGLIY 87


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