BLASTX nr result

ID: Coptis24_contig00008889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008889
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vi...   315   6e-84
ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cuc...   298   1e-78
ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|2...   296   4e-78
ref|XP_002509504.1| zinc finger protein, putative [Ricinus commu...   288   8e-76
ref|NP_001242284.1| uncharacterized protein LOC100819557 [Glycin...   276   3e-72

>ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vinifera]
           gi|147815339|emb|CAN67772.1| hypothetical protein
           VITISV_010523 [Vitis vinifera]
           gi|296082337|emb|CBI21342.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  315 bits (808), Expect = 6e-84
 Identities = 160/236 (67%), Positives = 187/236 (79%), Gaps = 2/236 (0%)
 Frame = -2

Query: 727 FPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPIV 548
           FP+W+ + RRF P+SPFF+SGNIERELLAKQVALDLT+++K  LQ ++ EEGR ++CPIV
Sbjct: 12  FPYWSSVRRRFGPESPFFTSGNIERELLAKQVALDLTEDEKQHLQNLEDEEGRGLFCPIV 71

Query: 547 NCGAKLNSLDGFEDHYHARHTASCSVCSRGYPTSRLLSIHVSEAHDSFFQAKVARGIAMY 368
            CGA+L SL+GFEDHY+ARHTASCSVCSR YPTSRLLSIHVSEAHDSFFQAKVARG AMY
Sbjct: 72  GCGARLTSLEGFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMY 131

Query: 367 ECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSXXXXXXXXXXRADHKKEE-S 191
           ECLVEGCG+KLKSYKSRQQHLVD HKFPTSFEFFKKG  S          +A HK+EE S
Sbjct: 132 ECLVEGCGMKLKSYKSRQQHLVDKHKFPTSFEFFKKGQPSKKRRQKLQRKQAVHKREEAS 191

Query: 190 AGMEV-DETISNLVSAVXXXXXXXXXXXXXSFGRRHTRGLTFLPRTLQRDRNHNSS 26
           + ME+ +ETIS LVSAV             SFGR HTRG TF+PR +Q ++  +S+
Sbjct: 192 STMEIEEETISGLVSAVSKLSTSDSTPSSVSFGRHHTRGFTFVPRAVQNEKRPDST 247


>ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cucumis sativus]
           gi|449518803|ref|XP_004166425.1| PREDICTED: zinc finger
           protein 511-like [Cucumis sativus]
          Length = 249

 Score =  298 bits (762), Expect = 1e-78
 Identities = 151/240 (62%), Positives = 175/240 (72%), Gaps = 1/240 (0%)
 Frame = -2

Query: 727 FPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPIV 548
           FP W P+ RRF PDSPFF+SGN+ERE+LAKQVALDLT+++K QL  M V+    I+CPIV
Sbjct: 9   FPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDARSEIFCPIV 68

Query: 547 NCGAKLNSLDGFEDHYHARHTASCSVCSRGYPTSRLLSIHVSEAHDSFFQAKVARGIAMY 368
            CGA L SLD FEDHY++RHTASCSVC R YPTSRLLS+HVSEAHDSFFQAKVARG  MY
Sbjct: 69  GCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMY 128

Query: 367 ECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSXXXXXXXXXXRADHKKEESA 188
           ECLVEGCGLK KSYKSR QHLVD HKF  SFEFFKK H S          +A   +EE++
Sbjct: 129 ECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQASQGREETS 188

Query: 187 GMEVD-ETISNLVSAVXXXXXXXXXXXXXSFGRRHTRGLTFLPRTLQRDRNHNSSLGGEK 11
            MEV+ E +  L+S V             SFGRRHTRGLTF+PR +QR++  +SS  G K
Sbjct: 189 KMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVSDSSTAGTK 248


>ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|222847369|gb|EEE84916.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  296 bits (758), Expect = 4e-78
 Identities = 155/236 (65%), Positives = 181/236 (76%), Gaps = 3/236 (1%)
 Frame = -2

Query: 727 FPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEG-RVIYCPI 551
           FP+W PI RRF P+SPFFSSGNIERELLAKQVALDL++++K +LQ +  E+G R + CPI
Sbjct: 15  FPYWKPIRRRFGPESPFFSSGNIERELLAKQVALDLSEDEKHRLQDLINEDGSREVVCPI 74

Query: 550 VNCGAKLNSLDGFEDHYHARHTASCSVCSRGYPTSRLLSIHVSEAHDSFFQAKVARGIAM 371
           V CGA L SL+ FEDHY+ RHTASCSVCSR YPTS LLSIHVSEAHDSFFQAKVARG AM
Sbjct: 75  VGCGAHLISLEHFEDHYNGRHTASCSVCSRVYPTSLLLSIHVSEAHDSFFQAKVARGYAM 134

Query: 370 YECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSXXXXXXXXXXRADHKKEE- 194
           YECLVEGCGLK K+YK RQQHLVD HKFP+SFEFFKK HLS          +A H+ EE 
Sbjct: 135 YECLVEGCGLKFKNYKGRQQHLVDKHKFPSSFEFFKKAHLSKKARQKQHRKQAIHRSEET 194

Query: 193 SAGMEVD-ETISNLVSAVXXXXXXXXXXXXXSFGRRHTRGLTFLPRTLQRDRNHNS 29
           S+ M+++ ETI  LVSAV             SFGRR+TRGLTF+PR +QR++  +S
Sbjct: 195 SSKMDIEGETIDGLVSAVSKLSTSDSSPSSISFGRRNTRGLTFVPRAVQREKRADS 250


>ref|XP_002509504.1| zinc finger protein, putative [Ricinus communis]
           gi|223549403|gb|EEF50891.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 253

 Score =  288 bits (738), Expect = 8e-76
 Identities = 149/228 (65%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
 Frame = -2

Query: 727 FPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPIV 548
           FP+W PI RRF P+SPFF+ GNIERELLAKQ+ALDLT+++K QLQ +  E+ R + CPIV
Sbjct: 16  FPYWTPIRRRFGPESPFFAYGNIERELLAKQIALDLTEDEKPQLQNLIDEDDREVSCPIV 75

Query: 547 NCGAKLNSLDGFEDHYHARHTASCSVCSRGYPTSRLLSIHVSEAHDSFFQAKVARGIAMY 368
            CGA L SL+ FEDHY+ARHTASCSVCSR YPTSRLL IHVSEAHDSFFQAKV RG  MY
Sbjct: 76  GCGAHLTSLEDFEDHYNARHTASCSVCSRVYPTSRLLGIHVSEAHDSFFQAKVERGYPMY 135

Query: 367 ECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSXXXXXXXXXXRADHKKEESA 188
           ECLVEGCGLKL +YKSRQQHLVD HKFP++FEFFKK H S          R   K+E  +
Sbjct: 136 ECLVEGCGLKLINYKSRQQHLVDKHKFPSAFEFFKKAHPSKKARQKHKHQRVIPKEEAPS 195

Query: 187 GMEVD-ETISNLVSAVXXXXXXXXXXXXXSFGRRHTRGLTFLPRTLQR 47
            MEV+ ETI  LVSAV             SFGRRH RGLTF+PR +Q+
Sbjct: 196 KMEVEGETIDGLVSAVSRLSTSDSSPSSISFGRRHNRGLTFVPRAVQQ 243


>ref|NP_001242284.1| uncharacterized protein LOC100819557 [Glycine max]
           gi|255638737|gb|ACU19673.1| unknown [Glycine max]
          Length = 254

 Score =  276 bits (707), Expect = 3e-72
 Identities = 146/244 (59%), Positives = 176/244 (72%), Gaps = 1/244 (0%)
 Frame = -2

Query: 754 NNNKVLGGRFPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEE 575
           N N  LG  FPFW P+ RRF P+SPFF+ GN+ERELLAKQ+AL+LT+E +   ++M  EE
Sbjct: 8   NQNHQLG--FPFWKPLRRRFGPESPFFAHGNLERELLAKQLALELTEEKQQLEKWMQEEE 65

Query: 574 GRVIYCPIVNCGAKLNSLDGFEDHYHARHTASCSVCSRGYPTSRLLSIHVSEAHDSFFQA 395
           GR ++CPIV CGA+L S++ FE+HY+ARHTASCSVCSR YPTS LLSIHVSE HDSFFQA
Sbjct: 66  GREVFCPIVGCGARLTSMEDFENHYNARHTASCSVCSRVYPTSWLLSIHVSEVHDSFFQA 125

Query: 394 KVARGIAMYECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSXXXXXXXXXXR 215
           KVARG  MYECLVE CGLK KSY SRQ+HLVD HKFPTSFEFFKK   S          +
Sbjct: 126 KVARGYDMYECLVERCGLKFKSYNSRQRHLVDKHKFPTSFEFFKKAKPSKKHRLKSQRKQ 185

Query: 214 ADHKKEESAGMEVDE-TISNLVSAVXXXXXXXXXXXXXSFGRRHTRGLTFLPRTLQRDRN 38
           A  K++ S  MEV+  ++ +LVSAV             SFGRRH +GL+F+PR +QR   
Sbjct: 186 AVCKEDSSGMMEVENASMDDLVSAVSKLNTSDSTPSSISFGRRH-KGLSFVPRAVQRGGG 244

Query: 37  HNSS 26
            NS+
Sbjct: 245 SNST 248


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