BLASTX nr result

ID: Coptis24_contig00008879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008879
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324140.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
emb|CBI27785.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [...   171   7e-41
ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncat...   171   7e-41
ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [...   169   2e-40

>ref|XP_002324140.1| predicted protein [Populus trichocarpa] gi|222865574|gb|EEF02705.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  172 bits (435), Expect = 3e-41
 Identities = 75/86 (87%), Positives = 86/86 (100%)
 Frame = +1

Query: 1   MILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFSQMWALFCLVQFYHVTHQKL 180
           MILKTFCAFLAF+LELFGV+GDGEFKW+YGYPY+AVVLNFSQMWAL+CLVQFY+VTH++L
Sbjct: 164 MILKTFCAFLAFLLELFGVFGDGEFKWYYGYPYIAVVLNFSQMWALYCLVQFYNVTHERL 223

Query: 181 QPIKPLAKFISFKAIVFATWWQGVGI 258
           +PIKPLAKF+SFKAIVFATWWQG+GI
Sbjct: 224 KPIKPLAKFVSFKAIVFATWWQGLGI 249


>emb|CBI27785.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/86 (91%), Positives = 82/86 (95%)
 Frame = +1

Query: 1   MILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFSQMWALFCLVQFYHVTHQKL 180
           MILKT CAFLAFVLELFGVYGDGEFKW YGYPY+AVVLNFSQMWALFCLVQFY+VTH +L
Sbjct: 197 MILKTVCAFLAFVLELFGVYGDGEFKWRYGYPYMAVVLNFSQMWALFCLVQFYNVTHGRL 256

Query: 181 QPIKPLAKFISFKAIVFATWWQGVGI 258
           Q IKPLAKFISFKAIVFATWWQGVGI
Sbjct: 257 QSIKPLAKFISFKAIVFATWWQGVGI 282


>ref|XP_002277706.1| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 432

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/86 (91%), Positives = 82/86 (95%)
 Frame = +1

Query: 1   MILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFSQMWALFCLVQFYHVTHQKL 180
           MILKT CAFLAFVLELFGVYGDGEFKW YGYPY+AVVLNFSQMWALFCLVQFY+VTH +L
Sbjct: 172 MILKTVCAFLAFVLELFGVYGDGEFKWRYGYPYMAVVLNFSQMWALFCLVQFYNVTHGRL 231

Query: 181 QPIKPLAKFISFKAIVFATWWQGVGI 258
           Q IKPLAKFISFKAIVFATWWQGVGI
Sbjct: 232 QSIKPLAKFISFKAIVFATWWQGVGI 257


>ref|XP_003595329.1| Transmembrane protein 184C [Medicago truncatula]
           gi|355484377|gb|AES65580.1| Transmembrane protein 184C
           [Medicago truncatula]
          Length = 439

 Score =  171 bits (432), Expect = 7e-41
 Identities = 76/86 (88%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   MILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFSQMWALFCLVQFYHVTHQKL 180
           MILKT CAFLA +LELFGVYGDGEFKW+YGYPY+AVVLNFSQ+WAL+CLVQFY+VTH++L
Sbjct: 183 MILKTVCAFLAMILELFGVYGDGEFKWYYGYPYMAVVLNFSQIWALYCLVQFYNVTHERL 242

Query: 181 QPIKPLAKFISFKAIVFATWWQGVGI 258
           QPIKPLAKFISFKAIVFATWWQGVGI
Sbjct: 243 QPIKPLAKFISFKAIVFATWWQGVGI 268


>ref|XP_003534953.1| PREDICTED: transmembrane protein 184C-like [Glycine max]
          Length = 396

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/86 (88%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   MILKTFCAFLAFVLELFGVYGDGEFKWHYGYPYLAVVLNFSQMWALFCLVQFYHVTHQKL 180
           MILKT CA LAF+LEL GVYGDGEFKW+YGYPY+AVVLNFSQMWAL+CLVQFY+VTH++L
Sbjct: 168 MILKTVCALLAFILELAGVYGDGEFKWYYGYPYIAVVLNFSQMWALYCLVQFYNVTHERL 227

Query: 181 QPIKPLAKFISFKAIVFATWWQGVGI 258
           QPIKPLAKFISFKAIVFATWWQGVGI
Sbjct: 228 QPIKPLAKFISFKAIVFATWWQGVGI 253


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