BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008878
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   110   9e-23
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...    85   7e-15
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...    84   1e-14
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...    81   8e-14
ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204...    80   2e-13

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  110 bits (276), Expect = 9e-23
 Identities = 72/156 (46%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = +1

Query: 10   PSLPSSMARPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVA 189
            P LP + A  SG PWIE   NLP LN+NM    S SSF+  +KK    +SPSPEVLQLVA
Sbjct: 2187 PLLPQNTAGASGLPWIEPNLNLPPLNINMMNPSSSSSFLKPQKK-STGLSPSPEVLQLVA 2245

Query: 190  SFAGPGPHALLIPGMLSSSSLGNELHLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGS 369
            S   PGPH   +PGM SS  L ++L LPK    G   E  ++       +  Q+S +   
Sbjct: 2246 SCVAPGPHIPPVPGMPSSGFLDSKLPLPKFIDRG---EFPDSTGASGNQKGKQTSTLSVH 2302

Query: 370  DQLPVERFGKTESGD-SSKTHSDPRQNDKADVEEIS 474
              L  ER  + ESGD SSKT SDP   +  +VEEIS
Sbjct: 2303 APLNQERREQIESGDSSSKTQSDPSHAEHPNVEEIS 2338


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 57/155 (36%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
 Frame = +1

Query: 19   PSSMARPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFA 198
            P  +   SG PW E+  NLP  +L+   S + S+++N +KK  + +SPSPEVLQLVAS  
Sbjct: 2168 PPLVPETSGRPWNESDLNLPLPSLSKMNSLTSSAYLNVQKKTTMGLSPSPEVLQLVASCV 2227

Query: 199  GPGPHALLIPGMLSSSSLGNELHL---PKPFGNGDERESRETKNVCKKDEVGQSSEVGGS 369
             PGPH     G  SSS   +++ +   P   G  D + + +T+ +  + +          
Sbjct: 2228 APGPHLTSGSGTTSSSIHESKVPMRKSPDQVGMSDSQVALDTERLPPQVQ---------- 2277

Query: 370  DQLPVERFGKTESGDSSKTHSDPRQNDKADVEEIS 474
              LP +R  + +SGDSSKT SD     K DVE+IS
Sbjct: 2278 SMLPEKRPDQPDSGDSSKTESDFSPIKKPDVEDIS 2312


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
 Frame = +1

Query: 10   PSLPSSMARPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVA 189
            P +P  +   SG PW E+  NLP  +L+   S + S+++N +KK  + +SPSPEVLQLVA
Sbjct: 2168 PQVPPLVHETSG-PWNESDFNLPLPSLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVA 2226

Query: 190  SFAGPGPHALLIPGMLSSSSLGNELHLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGS 369
            S   PGPH     G  S+S   +++ LPK                   D+VG S  +G  
Sbjct: 2227 SCVAPGPHLSSGSGATSASLHESKVPLPK-----------------SPDQVGISDPLGAL 2269

Query: 370  DQ-------------LPVERFGKTESGDSSKTHSDPRQNDKADVEEIS 474
            ++             +P +R  + +SGDSSKT SD     + DVE+IS
Sbjct: 2270 EEPMDTERSPPQVQCIPEKRLDQPDSGDSSKTESDLSPIKQPDVEDIS 2317


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 55/130 (42%), Positives = 75/130 (57%)
 Frame = +1

Query: 85   NLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFAGPGPHALLIPGMLSSSSLGNEL 264
            NL+M  S + SS+    KK  + +SPSPEVLQLVA+   PGPH     GM SSS L ++L
Sbjct: 2117 NLDMINSLT-SSYSKLPKKTSMGLSPSPEVLQLVAACVAPGPHLSSSSGMTSSSFLESKL 2175

Query: 265  HLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGSDQLPVERFGKTESGDSSKTHSDPRQ 444
             LPK   + DE    + +   +KD+  Q         LP E+ G+ + GDSSK+ ++  Q
Sbjct: 2176 PLPK---SVDEVGVSDAQGAEEKDKDMQGLPPDTQIILPEEKPGQPDDGDSSKSGTNNSQ 2232

Query: 445  NDKADVEEIS 474
             +K DVEEIS
Sbjct: 2233 TEKPDVEEIS 2242


>ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204186 [Cucumis sativus]
          Length = 2368

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 60/154 (38%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
 Frame = +1

Query: 19   PSSMA--RPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVAS 192
            P  MA    S  P +E+  ++P+LNLNM    S  S   ++KK  + +SPSPEVLQLVAS
Sbjct: 2206 PQEMAGTSTSRLPGLESDLSIPALNLNMNPPSS--SLQTNQKKTNMGLSPSPEVLQLVAS 2263

Query: 193  FAGPGPHALLIPGMLSSSSLGNELHLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGSD 372
               PG +   I G L+SS L   L L       D   S+ +    KK  +  SS     D
Sbjct: 2264 CVAPGSNLSSISGKLNSSILEKTLPLSTSHDPEDLLGSKGSPGKGKKQRLSFSS----LD 2319

Query: 373  QLPVERFGKTESGDSSKTHSDPRQNDKADVEEIS 474
                ++    ES DSSKT SDP ++ + D EEIS
Sbjct: 2320 FYNQDKPDSLESDDSSKTQSDPSRSKRPDGEEIS 2353