BLASTX nr result

ID: Coptis24_contig00008872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008872
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632772.1| PREDICTED: DCN1-like protein 4 isoform 2 [Vi...   243   6e-62
ref|XP_002273365.1| PREDICTED: DCN1-like protein 4 isoform 1 [Vi...   243   6e-62
ref|NP_001240087.1| uncharacterized protein LOC100776788 [Glycin...   234   3e-59
ref|XP_004152174.1| PREDICTED: DCN1-like protein 4-like [Cucumis...   233   6e-59
ref|XP_002527318.1| Defective in cullin neddylation protein, put...   233   8e-59

>ref|XP_003632772.1| PREDICTED: DCN1-like protein 4 isoform 2 [Vitis vinifera]
          Length = 212

 Score =  243 bits (621), Expect = 6e-62
 Identities = 118/146 (80%), Positives = 133/146 (91%)
 Frame = -3

Query: 1082 KAVVKELERVDQLFYSYANKSSGVIDPEGIESLCSDVGVDYTNVRILMLAWKMKAEKQGY 903
            KA  KELER+DQLFYSYAN+SS +IDPEGIE LCSDV VD+T+VRILMLAWKMKAEKQGY
Sbjct: 13   KATSKELERIDQLFYSYANRSSNLIDPEGIEVLCSDVEVDHTDVRILMLAWKMKAEKQGY 72

Query: 902  FTLDEWRKGLKALKVDNVSKLKKALPDLEKEVRTPENFTDFYSFAFQYCLTEEKQKNIDI 723
            FTL+EWR+GLKAL+ D VSKLKKALP+LEKEVR P NF DFYS+AFQYCLTEEKQK+IDI
Sbjct: 73   FTLEEWRRGLKALRTDTVSKLKKALPELEKEVRRPSNFVDFYSYAFQYCLTEEKQKSIDI 132

Query: 722  ESCCELLNLVLRTKFCAQVDSFIEYL 645
            ES CELL+LVL ++F AQVDSF+EYL
Sbjct: 133  ESICELLDLVLGSQFQAQVDSFVEYL 158



 Score =  107 bits (268), Expect = 5e-21
 Identities = 50/72 (69%), Positives = 54/72 (75%)
 Frame = -1

Query: 484 LNLSVPMRLQGXSFIEYLNYQCDYKVINMDQWMGFLRFCNEISFPDFTNYDEDLAWPLIL 305
           L L    + Q  SF+EYL  Q DYKVINMDQWMGF RFCNEISFPD  NYD +LAWPLIL
Sbjct: 141 LVLGSQFQAQVDSFVEYLKTQNDYKVINMDQWMGFFRFCNEISFPDLRNYDPELAWPLIL 200

Query: 304 DNFVEWIREKQA 269
           DNFVEW R K +
Sbjct: 201 DNFVEWRRAKHS 212


>ref|XP_002273365.1| PREDICTED: DCN1-like protein 4 isoform 1 [Vitis vinifera]
            gi|297743605|emb|CBI36472.3| unnamed protein product
            [Vitis vinifera]
          Length = 231

 Score =  243 bits (621), Expect = 6e-62
 Identities = 118/146 (80%), Positives = 133/146 (91%)
 Frame = -3

Query: 1082 KAVVKELERVDQLFYSYANKSSGVIDPEGIESLCSDVGVDYTNVRILMLAWKMKAEKQGY 903
            KA  KELER+DQLFYSYAN+SS +IDPEGIE LCSDV VD+T+VRILMLAWKMKAEKQGY
Sbjct: 32   KATSKELERIDQLFYSYANRSSNLIDPEGIEVLCSDVEVDHTDVRILMLAWKMKAEKQGY 91

Query: 902  FTLDEWRKGLKALKVDNVSKLKKALPDLEKEVRTPENFTDFYSFAFQYCLTEEKQKNIDI 723
            FTL+EWR+GLKAL+ D VSKLKKALP+LEKEVR P NF DFYS+AFQYCLTEEKQK+IDI
Sbjct: 92   FTLEEWRRGLKALRTDTVSKLKKALPELEKEVRRPSNFVDFYSYAFQYCLTEEKQKSIDI 151

Query: 722  ESCCELLNLVLRTKFCAQVDSFIEYL 645
            ES CELL+LVL ++F AQVDSF+EYL
Sbjct: 152  ESICELLDLVLGSQFQAQVDSFVEYL 177



 Score =  107 bits (268), Expect = 5e-21
 Identities = 50/72 (69%), Positives = 54/72 (75%)
 Frame = -1

Query: 484 LNLSVPMRLQGXSFIEYLNYQCDYKVINMDQWMGFLRFCNEISFPDFTNYDEDLAWPLIL 305
           L L    + Q  SF+EYL  Q DYKVINMDQWMGF RFCNEISFPD  NYD +LAWPLIL
Sbjct: 160 LVLGSQFQAQVDSFVEYLKTQNDYKVINMDQWMGFFRFCNEISFPDLRNYDPELAWPLIL 219

Query: 304 DNFVEWIREKQA 269
           DNFVEW R K +
Sbjct: 220 DNFVEWRRAKHS 231


>ref|NP_001240087.1| uncharacterized protein LOC100776788 [Glycine max]
            gi|255645050|gb|ACU23024.1| unknown [Glycine max]
          Length = 228

 Score =  234 bits (598), Expect = 3e-59
 Identities = 113/146 (77%), Positives = 130/146 (89%)
 Frame = -3

Query: 1082 KAVVKELERVDQLFYSYANKSSGVIDPEGIESLCSDVGVDYTNVRILMLAWKMKAEKQGY 903
            KA  KE ER+D LFYSYAN S+G+IDPEGIE+LC+D+ VD+T+VR+LMLAWKMKAE+QGY
Sbjct: 29   KASSKESERIDSLFYSYANGSTGLIDPEGIETLCADMEVDHTDVRVLMLAWKMKAEEQGY 88

Query: 902  FTLDEWRKGLKALKVDNVSKLKKALPDLEKEVRTPENFTDFYSFAFQYCLTEEKQKNIDI 723
            FTLDEWR+GLKAL+ D VSKLKKALPDLEKEVR P NFTDFYS+AFQYCLTEEKQK+IDI
Sbjct: 89   FTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFTDFYSYAFQYCLTEEKQKSIDI 148

Query: 722  ESCCELLNLVLRTKFCAQVDSFIEYL 645
            ES CELL LVL + F AQV+ F+EYL
Sbjct: 149  ESICELLTLVLGSTFPAQVNLFVEYL 174



 Score =  106 bits (265), Expect = 1e-20
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = -1

Query: 445 FIEYLNYQCDYKVINMDQWMGFLRFCNEISFPDFTNYDEDLAWPLILDNFVEWIREKQ 272
           F+EYL  Q DYKVINMDQWMGF RFCNEISFP   +YD +LAWPLILDNFVEW+REKQ
Sbjct: 170 FVEYLKAQNDYKVINMDQWMGFFRFCNEISFPTLNDYDPELAWPLILDNFVEWLREKQ 227


>ref|XP_004152174.1| PREDICTED: DCN1-like protein 4-like [Cucumis sativus]
            gi|449527597|ref|XP_004170796.1| PREDICTED: DCN1-like
            protein 4-like [Cucumis sativus]
          Length = 230

 Score =  233 bits (595), Expect = 6e-59
 Identities = 110/148 (74%), Positives = 132/148 (89%)
 Frame = -3

Query: 1082 KAVVKELERVDQLFYSYANKSSGVIDPEGIESLCSDVGVDYTNVRILMLAWKMKAEKQGY 903
            +A  KELER+D LFYSYAN SSG+IDPEGIE+LCSD+ VD+T+VRILMLAWKMK+EKQGY
Sbjct: 31   RASSKELERIDSLFYSYANPSSGLIDPEGIENLCSDIEVDHTDVRILMLAWKMKSEKQGY 90

Query: 902  FTLDEWRKGLKALKVDNVSKLKKALPDLEKEVRTPENFTDFYSFAFQYCLTEEKQKNIDI 723
            F LDEWR GLK+L+ D VSKLKKALPDLEKEVR P NF DFYS+AF+YCLTEEKQK+IDI
Sbjct: 91   FNLDEWRTGLKSLRADTVSKLKKALPDLEKEVRRPSNFVDFYSYAFRYCLTEEKQKSIDI 150

Query: 722  ESCCELLNLVLRTKFCAQVDSFIEYLNV 639
            ES CELL+LVL ++F +QV++F++YL +
Sbjct: 151  ESICELLDLVLGSQFHSQVNAFVDYLKI 178



 Score =  107 bits (266), Expect = 8e-21
 Identities = 45/62 (72%), Positives = 52/62 (83%)
 Frame = -1

Query: 457 QGXSFIEYLNYQCDYKVINMDQWMGFLRFCNEISFPDFTNYDEDLAWPLILDNFVEWIRE 278
           Q  +F++YL  Q DYKVINMDQWMGF RFCNEIS+PD  NYD +LAWPLILDNFVEW++ 
Sbjct: 168 QVNAFVDYLKIQTDYKVINMDQWMGFFRFCNEISYPDLINYDSELAWPLILDNFVEWLQA 227

Query: 277 KQ 272
           KQ
Sbjct: 228 KQ 229


>ref|XP_002527318.1| Defective in cullin neddylation protein, putative [Ricinus communis]
            gi|223533318|gb|EEF35070.1| Defective in cullin
            neddylation protein, putative [Ricinus communis]
          Length = 231

 Score =  233 bits (594), Expect = 8e-59
 Identities = 110/148 (74%), Positives = 132/148 (89%)
 Frame = -3

Query: 1082 KAVVKELERVDQLFYSYANKSSGVIDPEGIESLCSDVGVDYTNVRILMLAWKMKAEKQGY 903
            KA  KE+ER+D LFYSYAN+SS +IDPEGIE+LCSD+ VD+T+VRILMLAWKMKAEKQGY
Sbjct: 32   KASSKEMERIDSLFYSYANRSSSLIDPEGIETLCSDMEVDHTDVRILMLAWKMKAEKQGY 91

Query: 902  FTLDEWRKGLKALKVDNVSKLKKALPDLEKEVRTPENFTDFYSFAFQYCLTEEKQKNIDI 723
            FTL+EWR+GLKAL+ D V+KLKK+LPDLEKEV+ P NF DFYS+ F+YCLTEEKQK+IDI
Sbjct: 92   FTLEEWRRGLKALRADTVNKLKKSLPDLEKEVKRPSNFVDFYSYGFRYCLTEEKQKSIDI 151

Query: 722  ESCCELLNLVLRTKFCAQVDSFIEYLNV 639
            ES C+LL+LVL ++F AQVD FIEYL +
Sbjct: 152  ESICQLLDLVLGSQFRAQVDYFIEYLKI 179



 Score =  108 bits (271), Expect = 2e-21
 Identities = 50/71 (70%), Positives = 55/71 (77%)
 Frame = -1

Query: 484 LNLSVPMRLQGXSFIEYLNYQCDYKVINMDQWMGFLRFCNEISFPDFTNYDEDLAWPLIL 305
           L L    R Q   FIEYL  Q DYKV+NMDQWMGF RFCNEISFPD  NY+ +LAWPLIL
Sbjct: 160 LVLGSQFRAQVDYFIEYLKIQNDYKVVNMDQWMGFYRFCNEISFPDLDNYNPELAWPLIL 219

Query: 304 DNFVEWIREKQ 272
           DNFVEW+REK+
Sbjct: 220 DNFVEWMREKR 230


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