BLASTX nr result

ID: Coptis24_contig00008865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008865
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002517897.1| s-receptor kinase, putative [Ricinus communi...   126   2e-27
emb|CBI17998.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002319938.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002277219.1| PREDICTED: G-type lectin S-receptor-like ser...   123   1e-26

>ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|222862555|gb|EEF00062.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/133 (48%), Positives = 87/133 (65%)
 Frame = -2

Query: 400 MRSRNQTWMXXXXXXXXLAPKTHFCTAADTISAGQSLIPNQTLISKDENFELGFFQPGTS 221
           M  RN  W+         + K H    ADTISA  SL  +QT++S  + FELGFF+PG S
Sbjct: 1   MDVRNNPWIMPFVIFLCFSLKPHVSLGADTISANSSLSGDQTVVSAGKVFELGFFKPGNS 60

Query: 220 PNSYIGIWYKKVSVENKTVVWVANRDTPLTDLASFELKLSEDGNLVLLNQLKVAVWSTNI 41
            N YIG+WY +  V  +T+VWVANR+TP++D  S EL++S DGNL L N+ K+ +WSTN+
Sbjct: 61  SNYYIGMWYYRDKVSAQTIVWVANRETPVSDRFSSELRIS-DGNLALFNESKILIWSTNL 119

Query: 40  TSSAMNSSEVVLG 2
           +SS+  S E VLG
Sbjct: 120 SSSSSRSVEAVLG 132


>ref|XP_002517897.1| s-receptor kinase, putative [Ricinus communis]
           gi|223542879|gb|EEF44415.1| s-receptor kinase, putative
           [Ricinus communis]
          Length = 797

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = -2

Query: 319 ADTISAGQSLIPNQTLISKDENFELGFFQPGTSPNSYIGIWYKKVSVENKTVVWVANRDT 140
           +DTI  GQSL  NQTL SK+ NFELGFF+PG S   YIGIWYK  ++ N+TVVWVANR+ 
Sbjct: 30  SDTIFPGQSLSGNQTLTSKEGNFELGFFRPGNSSYHYIGIWYK--NLPNQTVVWVANREQ 87

Query: 139 PLTDLASFELKLSEDGNLVLLNQLKVAVWSTNITSSAMNSSEVVL 5
           P++DL+   LK+SEDGNLVLLNQ + A+WSTN  S + NS+  +L
Sbjct: 88  PVSDLSISALKISEDGNLVLLNQSRNALWSTNSVSKSSNSTIAIL 132


>emb|CBI17998.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/134 (50%), Positives = 87/134 (64%)
 Frame = -2

Query: 406 AEMRSRNQTWMXXXXXXXXLAPKTHFCTAADTISAGQSLIPNQTLISKDENFELGFFQPG 227
           A M +RN  W+        L  K H     DTIS  ++L  +QTL+S   NF LGFF+PG
Sbjct: 63  AAMDTRNNPWLKLSILFLCLTLKIHLSHGGDTISGNETLSGDQTLVSAGGNFVLGFFKPG 122

Query: 226 TSPNSYIGIWYKKVSVENKTVVWVANRDTPLTDLASFELKLSEDGNLVLLNQLKVAVWST 47
            S   YIG+WYKKVS   +T+VWVANRDTP+TD  S +LK+  DGNLVL N+ +V VWST
Sbjct: 123 NSSYYYIGMWYKKVS--EQTIVWVANRDTPVTDNRSSQLKIL-DGNLVLFNESQVPVWST 179

Query: 46  NITSSAMNSSEVVL 5
           N+TS++ +   V+L
Sbjct: 180 NLTSNSTSLEAVLL 193


>ref|XP_002319938.1| predicted protein [Populus trichocarpa] gi|222858314|gb|EEE95861.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/133 (47%), Positives = 83/133 (62%)
 Frame = -2

Query: 400 MRSRNQTWMXXXXXXXXLAPKTHFCTAADTISAGQSLIPNQTLISKDENFELGFFQPGTS 221
           M  RN  W+            +H    ADTISA  SL  +QT++S  + FELGFF PG S
Sbjct: 1   MDVRNNPWIMFFVIFFCFPLNSHVSLGADTISANSSLSGDQTIVSARKVFELGFFHPGKS 60

Query: 220 PNSYIGIWYKKVSVENKTVVWVANRDTPLTDLASFELKLSEDGNLVLLNQLKVAVWSTNI 41
            N YIG+WY +  V  +T+VWVANR+TP++D  S EL++S  GNLVL N+  + +WSTN+
Sbjct: 61  SNYYIGMWYHRDKVSEQTIVWVANRETPVSDRFSSELRIS-GGNLVLFNESMIPIWSTNL 119

Query: 40  TSSAMNSSEVVLG 2
           +SS   S E VLG
Sbjct: 120 SSSRSGSVEAVLG 132


>ref|XP_002277219.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At2g19130 isoform 1 [Vitis vinifera]
          Length = 826

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/132 (50%), Positives = 86/132 (65%)
 Frame = -2

Query: 400 MRSRNQTWMXXXXXXXXLAPKTHFCTAADTISAGQSLIPNQTLISKDENFELGFFQPGTS 221
           M +RN  W+        L  K H     DTIS  ++L  +QTL+S   NF LGFF+PG S
Sbjct: 1   MDTRNNPWLKLSILFLCLTLKIHLSHGGDTISGNETLSGDQTLVSAGGNFVLGFFKPGNS 60

Query: 220 PNSYIGIWYKKVSVENKTVVWVANRDTPLTDLASFELKLSEDGNLVLLNQLKVAVWSTNI 41
              YIG+WYKKVS   +T+VWVANRDTP+TD  S +LK+  DGNLVL N+ +V VWSTN+
Sbjct: 61  SYYYIGMWYKKVS--EQTIVWVANRDTPVTDNRSSQLKIL-DGNLVLFNESQVPVWSTNL 117

Query: 40  TSSAMNSSEVVL 5
           TS++ +   V+L
Sbjct: 118 TSNSTSLEAVLL 129


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