BLASTX nr result

ID: Coptis24_contig00008856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008856
         (1452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517959.1| conserved hypothetical protein [Ricinus comm...   480   e-133
ref|XP_002277685.1| PREDICTED: uncharacterized protein LOC100241...   479   e-132
ref|XP_002277708.1| PREDICTED: uncharacterized protein LOC100241...   468   e-129
ref|XP_004139934.1| PREDICTED: uncharacterized protein LOC101222...   467   e-129
ref|XP_004154603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   464   e-128

>ref|XP_002517959.1| conserved hypothetical protein [Ricinus communis]
            gi|223542941|gb|EEF44477.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 317

 Score =  480 bits (1236), Expect = e-133
 Identities = 224/317 (70%), Positives = 265/317 (83%), Gaps = 2/317 (0%)
 Frame = +3

Query: 198  MISGKGSMQSNLERFLNCTTPIVPSRFLPKNAIRNYSQLWHPWERETVEYFTLGDLWSCY 377
            MI  KGS QSNL+ FL+CTTP+VPS+FLPK  IRN ++LWHPWER+TVEYFTLGDLW+C+
Sbjct: 1    MIFDKGSAQSNLDCFLHCTTPLVPSQFLPKTEIRNLNRLWHPWERDTVEYFTLGDLWNCF 60

Query: 378  DEWSAYGVGVPIALNKEEPVVQYYVPYLSAIQIFTSNTSIGSFREDSGSGDCETRDSFSD 557
            DEWSAYG GVPIALN  E +VQYYVPYLSAIQIFTSN+S+  FR++  SGD ETRDSFSD
Sbjct: 61   DEWSAYGAGVPIALNNGETLVQYYVPYLSAIQIFTSNSSLNGFRDEIESGDGETRDSFSD 120

Query: 558  TCSDETESEKSWRWEGGSNPESSHEQERLYTQNERLGYLYFQYFERSTPYGRVPLMDKVN 737
            +CSDE+ES+K WRW+G S+ E   EQ+  +  N+RLG+LYFQYFERSTPYGRVPLMDK+N
Sbjct: 121  SCSDESESDKLWRWDGCSSEEGGFEQDNHWRLNDRLGHLYFQYFERSTPYGRVPLMDKIN 180

Query: 738  CLARRFPGLMTLESTDLSPASWMAVAWYPIYHIPTGRTVKDLSACFLSFHTLSSTFQDMG 917
             LA R+PGLM+L S DLSPASWMAVAWYPIYHIP GRT+KDLS CFL++HTLSS+FQDM 
Sbjct: 181  GLAERYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQDMD 240

Query: 918  SEDEIGLVGKTTKKG--VPLSPFGLATYKMQGSVWVPEDNGQDQERLLSLYSAADSWLKQ 1091
             +D+I    +  K+G  + L PFGLATYKMQG+VW+  + G+DQERL+SL+S ADSWLKQ
Sbjct: 241  LDDDIDSPERKRKEGESISLPPFGLATYKMQGNVWISGNCGRDQERLVSLFSVADSWLKQ 300

Query: 1092 LGAQHHDFNYFTGIRYG 1142
            L  QHHDFNYF GIR G
Sbjct: 301  LRVQHHDFNYFMGIRRG 317


>ref|XP_002277685.1| PREDICTED: uncharacterized protein LOC100241481 isoform 1 [Vitis
            vinifera] gi|297739252|emb|CBI28903.3| unnamed protein
            product [Vitis vinifera]
          Length = 318

 Score =  479 bits (1232), Expect = e-132
 Identities = 226/318 (71%), Positives = 263/318 (82%), Gaps = 3/318 (0%)
 Frame = +3

Query: 198  MISGKGSMQSNLERFLNCTTPIVPSRFLPKNAIRNYSQLWHPWERETVEYFTLGDLWSCY 377
            MI  KGSMQSNLE FL C TP+V S+FL K  IR+ + LWHPWERE VEYFTLGDLW+C+
Sbjct: 1    MILDKGSMQSNLECFLECITPVVQSQFLHKTEIRDLNVLWHPWEREKVEYFTLGDLWNCF 60

Query: 378  DEWSAYGVGVPIALNKEEPVVQYYVPYLSAIQIFTSNTSIGSFREDSGSGDCETRDSFSD 557
            DEWSAYG GVPI LN  E +VQYYVPYLSAIQIFTSN++  SFRE++ SGDCETRDSFSD
Sbjct: 61   DEWSAYGAGVPILLNNNETLVQYYVPYLSAIQIFTSNSARNSFREETESGDCETRDSFSD 120

Query: 558  TCSDETESEKSWRWEGGSNPESSHEQERLYTQNERLGYLYFQYFERSTPYGRVPLMDKVN 737
            +CSDE+ESEK WRW+G S+ E   EQE L+ +++RLG LYFQYFERSTPYGRVPLMDK++
Sbjct: 121  SCSDESESEKQWRWDGCSSEEGCLEQESLWHRSDRLGCLYFQYFERSTPYGRVPLMDKIS 180

Query: 738  CLARRFPGLMTLESTDLSPASWMAVAWYPIYHIPTGRTVKDLSACFLSFHTLSSTFQDMG 917
             LA+R+PGLM+L S DLSPASWMAVAWYPIYHIP GRT+KDLS CFL++HTLSS+FQDM 
Sbjct: 181  GLAQRYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQDMD 240

Query: 918  SEDEIGLVGKTTKK---GVPLSPFGLATYKMQGSVWVPEDNGQDQERLLSLYSAADSWLK 1088
             +D+I    K  +K   G+ L PFGLATYKMQG+VWV   +G+DQER++SL S ADSWLK
Sbjct: 241  LDDDIDSAEKKKRKEGEGISLPPFGLATYKMQGNVWVSSKSGRDQERVMSLLSVADSWLK 300

Query: 1089 QLGAQHHDFNYFTGIRYG 1142
            QL  QHHDFNYFTGIR G
Sbjct: 301  QLRVQHHDFNYFTGIRRG 318


>ref|XP_002277708.1| PREDICTED: uncharacterized protein LOC100241481 isoform 2 [Vitis
            vinifera]
          Length = 311

 Score =  468 bits (1204), Expect = e-129
 Identities = 222/315 (70%), Positives = 260/315 (82%)
 Frame = +3

Query: 198  MISGKGSMQSNLERFLNCTTPIVPSRFLPKNAIRNYSQLWHPWERETVEYFTLGDLWSCY 377
            MI  KGSMQSNLE FL C TP+V S+FL K  IR+ + LWHPWERE VEYFTLGDLW+C+
Sbjct: 1    MILDKGSMQSNLECFLECITPVVQSQFLHKTEIRDLNVLWHPWEREKVEYFTLGDLWNCF 60

Query: 378  DEWSAYGVGVPIALNKEEPVVQYYVPYLSAIQIFTSNTSIGSFREDSGSGDCETRDSFSD 557
            DEWSAYG GVPI LN  E +VQYYVPYLSAIQIFTSN++  SFRE++ SGDCETRDSFSD
Sbjct: 61   DEWSAYGAGVPILLNNNETLVQYYVPYLSAIQIFTSNSARNSFREETESGDCETRDSFSD 120

Query: 558  TCSDETESEKSWRWEGGSNPESSHEQERLYTQNERLGYLYFQYFERSTPYGRVPLMDKVN 737
            +CSDE+ESEK WRW+G S+ E   EQE L+ +++RLG LYFQYFERSTPYGRVPLMDK++
Sbjct: 121  SCSDESESEKQWRWDGCSSEEGCLEQESLWHRSDRLGCLYFQYFERSTPYGRVPLMDKIS 180

Query: 738  CLARRFPGLMTLESTDLSPASWMAVAWYPIYHIPTGRTVKDLSACFLSFHTLSSTFQDMG 917
             LA+R+PGLM+L S DLSPASWMAVAWYPIYHIP GRT+KDLS CFL++HTLSS+FQ + 
Sbjct: 181  GLAQRYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQGIL 240

Query: 918  SEDEIGLVGKTTKKGVPLSPFGLATYKMQGSVWVPEDNGQDQERLLSLYSAADSWLKQLG 1097
            +E +    G    +G+ L PFGLATYKMQG+VWV   +G+DQER++SL S ADSWLKQL 
Sbjct: 241  AEKKKRKEG----EGISLPPFGLATYKMQGNVWVSSKSGRDQERVMSLLSVADSWLKQLR 296

Query: 1098 AQHHDFNYFTGIRYG 1142
             QHHDFNYFTGIR G
Sbjct: 297  VQHHDFNYFTGIRRG 311


>ref|XP_004139934.1| PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus]
          Length = 316

 Score =  467 bits (1202), Expect = e-129
 Identities = 226/318 (71%), Positives = 260/318 (81%), Gaps = 3/318 (0%)
 Frame = +3

Query: 198  MISGKGSMQSNLERFLNCTTPIVPSRFLPKNAIRNYSQLWHPWERETVEYFTLGDLWSCY 377
            MI  K SMQSNL  FL+CTTP+V S+FLPK+ IRN ++LWHPWERE VEYFTLGDLW+CY
Sbjct: 1    MILDKVSMQSNLGCFLHCTTPVVNSQFLPKSEIRNLNRLWHPWEREKVEYFTLGDLWNCY 60

Query: 378  DEWSAYGVGVPIALNKEEPVVQYYVPYLSAIQIFTSNTSIGSFREDSGSGDCETRDSFSD 557
            DEWSAYG GVPIA+N  E +VQYYVPYLSAIQIFTSN+++  FR++   GD ETRDSFSD
Sbjct: 61   DEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTVNGFRDE--CGDSETRDSFSD 118

Query: 558  TCSDETESEKSWRWEGGSNPESSH-EQERLYTQNERLGYLYFQYFERSTPYGRVPLMDKV 734
            +CSDE+ESEK WRW+G S+ E    EQE     ++RLGYLYFQYFERSTPYGRVPLMDK+
Sbjct: 119  SCSDESESEKLWRWDGSSSEEGGFLEQESPLHLSDRLGYLYFQYFERSTPYGRVPLMDKI 178

Query: 735  NCLARRFPGLMTLESTDLSPASWMAVAWYPIYHIPTGRTVKDLSACFLSFHTLSSTFQDM 914
            N LARR+PGLMTL S DLSPASWMAV+WYPIYHIP GRT+KDLS CFLS+HTLSS+FQDM
Sbjct: 179  NGLARRYPGLMTLRSVDLSPASWMAVSWYPIYHIPMGRTIKDLSTCFLSYHTLSSSFQDM 238

Query: 915  GSEDEIGLVGKTTK--KGVPLSPFGLATYKMQGSVWVPEDNGQDQERLLSLYSAADSWLK 1088
              EDE     K  K  +G+ L+ FGLATYKMQG+VW+  + G+DQERL+SL S ADSWLK
Sbjct: 239  DVEDEFESGEKKRKEGEGISLAAFGLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLK 298

Query: 1089 QLGAQHHDFNYFTGIRYG 1142
            QL  QHHDFNYFT IR G
Sbjct: 299  QLRVQHHDFNYFTAIRRG 316


>ref|XP_004154603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222318 [Cucumis
            sativus]
          Length = 316

 Score =  464 bits (1195), Expect = e-128
 Identities = 225/318 (70%), Positives = 259/318 (81%), Gaps = 3/318 (0%)
 Frame = +3

Query: 198  MISGKGSMQSNLERFLNCTTPIVPSRFLPKNAIRNYSQLWHPWERETVEYFTLGDLWSCY 377
            MI  K SMQSNL  FL+CTTP+V S+FLPK+ IRN ++LWHPWERE VEYFTLGDLW+CY
Sbjct: 1    MILDKVSMQSNLGCFLHCTTPVVNSQFLPKSEIRNLNRLWHPWEREKVEYFTLGDLWNCY 60

Query: 378  DEWSAYGVGVPIALNKEEPVVQYYVPYLSAIQIFTSNTSIGSFREDSGSGDCETRDSFSD 557
            DEWSAYG GVPIA+N  E +VQYYVPYLSAIQIFTSN+++  FR++   GD ETRDSFSD
Sbjct: 61   DEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTVNGFRDE--CGDSETRDSFSD 118

Query: 558  TCSDETESEKSWRWEGGSNPESSH-EQERLYTQNERLGYLYFQYFERSTPYGRVPLMDKV 734
            +CSDE+ESEK WRW+G S+ E    EQE     ++RLGYLYFQYFERSTPYGRVPLMDK+
Sbjct: 119  SCSDESESEKLWRWDGSSSEEGGFLEQESPLHLSDRLGYLYFQYFERSTPYGRVPLMDKI 178

Query: 735  NCLARRFPGLMTLESTDLSPASWMAVAWYPIYHIPTGRTVKDLSACFLSFHTLSSTFQDM 914
            N LARR+PGLMTL S DLSPASWMAV+WYPIYHIP GRT+KDLS CFLS+HTLSS+FQDM
Sbjct: 179  NGLARRYPGLMTLRSVDLSPASWMAVSWYPIYHIPMGRTIKDLSTCFLSYHTLSSSFQDM 238

Query: 915  GSEDEIGLVGKTTK--KGVPLSPFGLATYKMQGSVWVPEDNGQDQERLLSLYSAADSWLK 1088
              EDE     K  K  +G+ L+ FGLATYKMQ +VW+  + G+DQERL+SL S ADSWLK
Sbjct: 239  DVEDEFESGEKKRKEGEGISLAAFGLATYKMQXNVWISGNYGRDQERLMSLLSVADSWLK 298

Query: 1089 QLGAQHHDFNYFTGIRYG 1142
            QL  QHHDFNYFT IR G
Sbjct: 299  QLRVQHHDFNYFTAIRRG 316


Top