BLASTX nr result

ID: Coptis24_contig00008855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008855
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]   260   6e-67
ref|XP_002284970.2| PREDICTED: uncharacterized protein LOC100267...   259   1e-66
ref|XP_002521841.1| conserved hypothetical protein [Ricinus comm...   256   2e-65
ref|XP_002313089.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-62
gb|ABK95245.1| unknown [Populus trichocarpa]                          246   2e-62

>emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]
          Length = 401

 Score =  260 bits (665), Expect = 6e-67
 Identities = 166/404 (41%), Positives = 226/404 (55%), Gaps = 26/404 (6%)
 Frame = -1

Query: 1491 LSLEYKPTTQTKQQNVLLREISMISNVADKLSKVDGFVSSLEEEIKKIEPFKGELPLCML 1312
            LSL+ +P+   K  N  L  IS I +V+++++K+D F+  LEEE++KI+ FK ELPLCM+
Sbjct: 8    LSLDLRPSYVPKTINDFLSGISTIGDVSERVTKLDEFLKRLEEEMRKIDAFKRELPLCMI 67

Query: 1311 LLNDAIVGLRYETMQLKGRSSDVGMSLIENNFVPLXXXXXXXXXXXXXXNDLRDKKNWMS 1132
            LL+DAI+ L+ E   L+ ++S+V   L E  F+PL               D +DKKNWMS
Sbjct: 68   LLSDAILALKEEL--LRSKASNVQPVLEE--FIPLKKDCDEEGGAKEEK-DCKDKKNWMS 122

Query: 1131 SVQLWSPNENQKPAQEIDKSGITSEGIIHK-------------------NGGGAFVPFKG 1009
            SVQLW+ +++       DK   +   I  +                    GG AF+PFKG
Sbjct: 123  SVQLWNSDDSASTDHIYDKKQDSKLEIKQRVDEENRPATEDPFQPCKSRTGGRAFLPFKG 182

Query: 1008 FSGF--MTPRRKDENEMQLEPALSLLSPGMKKLTRIEHSTCLMNXXXXXXXXXXXXXSTE 835
            +SGF   T R++D++E+ +   LSLL+PG+K       S+                 S  
Sbjct: 183  YSGFPVATARKEDKDELPVH-GLSLLTPGIKNPREESGSS-----GSKTSCSRGVSSSAP 236

Query: 834  NTQSTL--SHNPIQSQAPRKQRRCWSPDLHRRFLSSLQQLGGPQVATPKQIRELMKVDGL 661
            N Q  L     P Q Q  RKQRRCWSP+LHRRF+++LQQLGG Q ATPKQIRELM+VDGL
Sbjct: 237  NLQPNLRTGPQPPQQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGL 296

Query: 660  TNDEVKSHLQKFRLHTRRSPASGPTASESHKLSLFAAVWVPEDQCG-ASVVSTSESVSPQ 484
            TNDEVKSHLQK+RLHTRR P +      +  + +  ++W+P+DQ G +S  S+S+S SPQ
Sbjct: 297  TNDEVKSHLQKYRLHTRRMPTTSAAPPSNQPVVVLGSLWMPQDQYGDSSKASSSQSASPQ 356

Query: 483  GPLQL--MANXXXXXXXXXXXXXXXXXXXXSNWKGQFHKPGEDD 358
            GPLQL   A                       WK Q HK  ++D
Sbjct: 357  GPLQLGGAAGGTSTTGGDSMEDDEDEKSESYGWKSQVHKSVKED 400


>ref|XP_002284970.2| PREDICTED: uncharacterized protein LOC100267475 [Vitis vinifera]
            gi|297741334|emb|CBI32465.3| unnamed protein product
            [Vitis vinifera]
          Length = 401

 Score =  259 bits (663), Expect = 1e-66
 Identities = 165/404 (40%), Positives = 226/404 (55%), Gaps = 26/404 (6%)
 Frame = -1

Query: 1491 LSLEYKPTTQTKQQNVLLREISMISNVADKLSKVDGFVSSLEEEIKKIEPFKGELPLCML 1312
            LSL+ +P+   K  N  L  IS I +V+++++K+D F+  LEEE++KI+ FK ELPLCM+
Sbjct: 8    LSLDLRPSYMPKTINDFLSGISTIGDVSERVTKLDEFLKRLEEEMRKIDAFKRELPLCMI 67

Query: 1311 LLNDAIVGLRYETMQLKGRSSDVGMSLIENNFVPLXXXXXXXXXXXXXXNDLRDKKNWMS 1132
            LL+DAI+ L+ E   L+ ++S+V   L E  F+PL               + +DKKNWMS
Sbjct: 68   LLSDAILALKEEL--LRSKASNVQPVLEE--FIPLKKDCDEEGGAKEEK-ECKDKKNWMS 122

Query: 1131 SVQLWSPNENQKPAQEIDKSGITSEGIIHK-------------------NGGGAFVPFKG 1009
            SVQLW+ +++       DK   +   I  +                    GG AF+PFKG
Sbjct: 123  SVQLWNSDDSASTDHIYDKKQDSKLEIKQRVDEENRPATEDPFQPCKSRTGGRAFLPFKG 182

Query: 1008 FSGF--MTPRRKDENEMQLEPALSLLSPGMKKLTRIEHSTCLMNXXXXXXXXXXXXXSTE 835
            +SGF   T R++D++E+ +   LSLL+PG+K       S+                 S  
Sbjct: 183  YSGFPVATARKEDKDELPVH-GLSLLTPGIKNPREESGSS-----GSKTSCSRGVSSSAP 236

Query: 834  NTQSTL--SHNPIQSQAPRKQRRCWSPDLHRRFLSSLQQLGGPQVATPKQIRELMKVDGL 661
            N Q  L     P Q Q  RKQRRCWSP+LHRRF+++LQQLGG Q ATPKQIRELM+VDGL
Sbjct: 237  NLQPNLRTGPQPPQQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGL 296

Query: 660  TNDEVKSHLQKFRLHTRRSPASGPTASESHKLSLFAAVWVPEDQCG-ASVVSTSESVSPQ 484
            TNDEVKSHLQK+RLHTRR P +      +  + +  ++W+P+DQ G +S  S+S+S SPQ
Sbjct: 297  TNDEVKSHLQKYRLHTRRMPTTSAAPPSNQPVVVLGSLWMPQDQYGDSSKASSSQSASPQ 356

Query: 483  GPLQL--MANXXXXXXXXXXXXXXXXXXXXSNWKGQFHKPGEDD 358
            GPLQL   A                       WK Q HK  ++D
Sbjct: 357  GPLQLGGAAGGTSTTGGDSMEDDEDEKSESYGWKSQVHKSVKED 400


>ref|XP_002521841.1| conserved hypothetical protein [Ricinus communis]
            gi|223538879|gb|EEF40477.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  256 bits (653), Expect = 2e-65
 Identities = 167/407 (41%), Positives = 217/407 (53%), Gaps = 31/407 (7%)
 Frame = -1

Query: 1491 LSLEYKPTTQTKQQNVLLREISMISNVADKLSKVDGFVSSLEEEIKKIEPFKGELPLCML 1312
            LSL+++P+   K  + +L E+S+I NV+DK+SK+DGFV+ L+EE+KKI+ FK ELPLCML
Sbjct: 8    LSLDFRPSYVPKTISDILNEVSLIRNVSDKVSKLDGFVNGLQEEMKKIDAFKRELPLCML 67

Query: 1311 LLNDAIVGLRYETMQLKGRSSDVGMSLIENNFVPLXXXXXXXXXXXXXXN-------DLR 1153
            LLNDAI+ L+ E MQ            I   F+PL              +       D +
Sbjct: 68   LLNDAILFLKSELMQCAALDHQP----ILEEFMPLKKHSDRDDDDDGDQDGPIKKEKDTK 123

Query: 1152 DKKNWMSSVQLWSPNENQKPAQEID-KSGITSEGIIHKNGG------------------G 1030
            DKKNWMSSVQLW+ +++      ++ K  +  E    K G                    
Sbjct: 124  DKKNWMSSVQLWNTDDHPSTHNILETKQNLQLESKTTKKGNYQYANDDTFSACKSRSAAR 183

Query: 1029 AFVPFKGFSGFMTPRRKDENEMQLEPALSLLSPGMKKLTRIEHSTCLMNXXXXXXXXXXX 850
            AF+PFK +        K   +    P LSLL+PG+K L     ST               
Sbjct: 184  AFMPFKTYPDLSRKEDKHSTQELPVPGLSLLTPGIKNLREESTST-----GSRVSCSRAV 238

Query: 849  XXSTENTQSTLSHNPI--QSQAPRKQRRCWSPDLHRRFLSSLQQLGGPQVATPKQIRELM 676
              ST N QS L + P   Q Q  RKQRRCWSP+LHRRF+S+LQQLGG Q ATPKQIRELM
Sbjct: 239  SSSTPNPQSNLRNGPQSPQQQTARKQRRCWSPELHRRFVSALQQLGGSQAATPKQIRELM 298

Query: 675  KVDGLTNDEVKSHLQKFRLHTRRSPASGPTASESHKLSLFAAVWVPEDQCG-ASVVSTSE 499
            +VDGLTNDEVKSHLQK+RLHTRR P++   A+    + L   + + +DQ G  S  + S+
Sbjct: 299  QVDGLTNDEVKSHLQKYRLHTRRMPSATAAATNHSLVVLGGGLRMSQDQYGDDSKAAGSQ 358

Query: 498  SVSPQGPLQLMAN--XXXXXXXXXXXXXXXXXXXXSNWKGQFHKPGE 364
            S SPQGPLQL  N                       +WK Q H+ G+
Sbjct: 359  SGSPQGPLQLAGNTGATSTTGGDSMEDDEDAKSEGYSWKSQIHRSGK 405


>ref|XP_002313089.1| predicted protein [Populus trichocarpa] gi|222849497|gb|EEE87044.1|
            predicted protein [Populus trichocarpa]
          Length = 406

 Score =  246 bits (627), Expect = 2e-62
 Identities = 158/386 (40%), Positives = 206/386 (53%), Gaps = 25/386 (6%)
 Frame = -1

Query: 1440 LREISMISNVADKLSKVDGFVSSLEEEIKKIEPFKGELPLCMLLLNDAIVGLRYETMQLK 1261
            L+E+S+I + A K+ KVDGF+  LEEE +KI+ FK ELPLCMLLLNDAI  LR E MQ  
Sbjct: 32   LKEVSVIGDSAVKVLKVDGFIKDLEEEKRKIDAFKRELPLCMLLLNDAIQVLREEPMQ-- 89

Query: 1260 GRSSDVGMSLIENNFVPLXXXXXXXXXXXXXXN--DLRDKKNWMSSVQLWS--------- 1114
             R +      +   F+PL                 D +DKKNWMSSVQLW+         
Sbjct: 90   -RGASKNQQPVLEEFIPLKKNIDDHHENDGLIEEKDSKDKKNWMSSVQLWNADDHHPSTD 148

Query: 1113 ----PNENQKPAQEIDKSGI------TSEGIIHKNGGGAFVPFKGFSGFMTPRRKDENEM 964
                P +N K   + +K G         +  I +     F+PFK  SG  +     + E 
Sbjct: 149  YLFDPKQNLKLESKTNKKGNQYGNEDAFQAGIGRTAARTFMPFKACSGLSS-----KEEK 203

Query: 963  QLEPALSLLSPGMKKLTRIEHSTCLMNXXXXXXXXXXXXXSTENTQSTLSHNP-IQSQAP 787
               P+LSL +PG+K L    +ST   +                N+ S L + P  Q Q  
Sbjct: 204  LPVPSLSLSTPGIKSLKEESNSTGSRSSCSRSVSTISGP----NSDSNLRNGPQSQQQTA 259

Query: 786  RKQRRCWSPDLHRRFLSSLQQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRR 607
            RKQRRCWSP+LHRRF+++LQQLGG Q ATPKQIRELM+VDGLTNDEVKSHLQK+RLHTRR
Sbjct: 260  RKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRR 319

Query: 606  SPASGPTASESHKLSLFAAVWVPEDQCG-ASVVSTSESVSPQGPLQLMAN--XXXXXXXX 436
               +   A  +  + +   +W+ +DQ G +S  ++S+S SPQGPLQL  N          
Sbjct: 320  VTPATAAAPANQSVVVLGGLWMTQDQYGDSSKATSSQSGSPQGPLQLAVNTGGTSTTGGD 379

Query: 435  XXXXXXXXXXXXSNWKGQFHKPGEDD 358
                         +WK   H+ G+DD
Sbjct: 380  SMEDDEDAKSEGYSWKSHSHRSGKDD 405


>gb|ABK95245.1| unknown [Populus trichocarpa]
          Length = 406

 Score =  246 bits (627), Expect = 2e-62
 Identities = 162/386 (41%), Positives = 209/386 (54%), Gaps = 25/386 (6%)
 Frame = -1

Query: 1440 LREISMISNVADKLSKVDGFVSSLEEEIKKIEPFKGELPLCMLLLNDAIVGLRYETMQLK 1261
            L+E+S+I + A K+ KVDGF+  LEEE +KI+ FK ELPLCMLLLNDAI  LR E MQL 
Sbjct: 32   LKEVSVIGDSAVKVLKVDGFIKDLEEEKRKIDAFKRELPLCMLLLNDAIQVLREELMQL- 90

Query: 1260 GRSSDVGMSLIENNFVPLXXXXXXXXXXXXXXN--DLRDKKNWMSSVQLWS--------- 1114
            G S +    L E  F+PL                 D +DKKNWMSSVQLW+         
Sbjct: 91   GASKNQQPVLEE--FIPLKKNIDDHHENDGLIEEKDSKDKKNWMSSVQLWNADDHHPSTD 148

Query: 1113 ----PNENQKPAQEIDKSGI------TSEGIIHKNGGGAFVPFKGFSGFMTPRRKDENEM 964
                P +N K   + +K G         +  I +     F+PFK  SG  +     + E 
Sbjct: 149  YLFDPKQNLKLESKTNKKGNQYGNEDAFQAGIGRTAARTFMPFKACSGLSS-----KEEK 203

Query: 963  QLEPALSLLSPGMKKLTRIEHSTCLMNXXXXXXXXXXXXXSTENTQSTLSHNP-IQSQAP 787
               P+LSL +PG+K L    +ST   +                N+ S L + P  Q Q  
Sbjct: 204  LPVPSLSLSTPGIKSLKEESNSTGSRSSCSRSVSTISGP----NSDSNLRNGPQSQQQTA 259

Query: 786  RKQRRCWSPDLHRRFLSSLQQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRR 607
            RKQRRCWSP+LHRRF+++LQQLGG Q ATPKQIRELM+VDGLTNDEVKSHLQK+RLHTRR
Sbjct: 260  RKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRR 319

Query: 606  SPASGPTASESHKLSLFAAVWVPEDQCG-ASVVSTSESVSPQGPLQLMAN--XXXXXXXX 436
               +   A  +  + +   +W+ +DQ G +S  ++S+S SPQGPLQL  N          
Sbjct: 320  VTPATAAAPANQSVVVLGGLWMTQDQYGDSSKATSSQSGSPQGPLQLAVNTGGTSTTGGD 379

Query: 435  XXXXXXXXXXXXSNWKGQFHKPGEDD 358
                         +WK   H+ G+DD
Sbjct: 380  SMEDDEDAKSEGYSWKSHSHRSGKDD 405


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