BLASTX nr result

ID: Coptis24_contig00008851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008851
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285487.1| PREDICTED: UPF0480 protein At4g32130 [Vitis ...   277   2e-72
ref|XP_003603346.1| hypothetical protein MTR_3g106570 [Medicago ...   273   5e-71
gb|AFK35830.1| unknown [Medicago truncatula]                          271   1e-70
ref|XP_004136363.1| PREDICTED: ER membrane protein complex subun...   271   2e-70
ref|XP_002515481.1| conserved hypothetical protein [Ricinus comm...   268   2e-69

>ref|XP_002285487.1| PREDICTED: UPF0480 protein At4g32130 [Vitis vinifera]
           gi|296082124|emb|CBI21129.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  277 bits (709), Expect = 2e-72
 Identities = 141/196 (71%), Positives = 160/196 (81%)
 Frame = -1

Query: 950 LFFILFSVILTSSLALSSTKIDGYTITGRVKLEGLGAKGFGLPAKISNAKIVLNGGQRVT 771
           LF  L    L+++LA+SS   DGYTI GRVK+E  G KGFGLP K SN K++LNGGQ VT
Sbjct: 14  LFLQLCFSFLSTTLAISSGSSDGYTINGRVKIESTGVKGFGLPGKTSNVKVILNGGQWVT 73

Query: 770 FLRPDGYFSFHDVPAGTHLIEVAATGYFFSPVRVDVSARNRGKIQAALTETRRGLTELVL 591
           FLRPDGYFSFH+V AGTH+IEVAA GYFFSPVRVDVSARN GKIQAALTE R+GLTELVL
Sbjct: 74  FLRPDGYFSFHNVSAGTHMIEVAAIGYFFSPVRVDVSARNPGKIQAALTENRKGLTELVL 133

Query: 590 EPLREELYYEIREPFSILSLLKSPXXXXXXXXXXXXXXMPKLMENMDPEEMKQAQEQMRN 411
           EPLREE YYEIREPFSI+S++KSP              MPKL+ENMDPEEM++AQE+MRN
Sbjct: 134 EPLREEQYYEIREPFSIMSVVKSPMGLMMGFMLIVMFLMPKLVENMDPEEMRRAQEEMRN 193

Query: 410 QGVPSLASLLPGAGRS 363
           QGVPSL+SLLPGAGR+
Sbjct: 194 QGVPSLSSLLPGAGRA 209


>ref|XP_003603346.1| hypothetical protein MTR_3g106570 [Medicago truncatula]
           gi|355492394|gb|AES73597.1| hypothetical protein
           MTR_3g106570 [Medicago truncatula]
           gi|388502904|gb|AFK39518.1| unknown [Medicago
           truncatula]
          Length = 210

 Score =  273 bits (698), Expect = 5e-71
 Identities = 146/207 (70%), Positives = 161/207 (77%), Gaps = 3/207 (1%)
 Frame = -1

Query: 974 SLSINLVQLFFILFSV-ILTSSLALSST--KIDGYTITGRVKLEGLGAKGFGLPAKISNA 804
           S + +L    FI F   IL SS A S T    DGYTI GRVK+   G K F LPAK+SN 
Sbjct: 3   SFTKSLFLFLFIQFCFSILPSSFAQSPTPGSSDGYTIYGRVKIPSFGTKEFSLPAKVSNV 62

Query: 803 KIVLNGGQRVTFLRPDGYFSFHDVPAGTHLIEVAATGYFFSPVRVDVSARNRGKIQAALT 624
           K++LNGGQRV+FLRPDGYFSFH+VPAGTHLIEVAA GYFFSPVRVDVSARN GKIQAALT
Sbjct: 63  KVILNGGQRVSFLRPDGYFSFHNVPAGTHLIEVAAKGYFFSPVRVDVSARNPGKIQAALT 122

Query: 623 ETRRGLTELVLEPLREELYYEIREPFSILSLLKSPXXXXXXXXXXXXXXMPKLMENMDPE 444
           E RRGL+E VLEPL+EE YYEIREPFSI+S++KSP              MPKLMENMDPE
Sbjct: 123 ENRRGLSEFVLEPLKEEQYYEIREPFSIMSIVKSPMGLMMGFMLIVVFLMPKLMENMDPE 182

Query: 443 EMKQAQEQMRNQGVPSLASLLPGAGRS 363
           EMK+AQE+MRNQGVPSLASLLPGA RS
Sbjct: 183 EMKRAQEEMRNQGVPSLASLLPGAARS 209


>gb|AFK35830.1| unknown [Medicago truncatula]
          Length = 210

 Score =  271 bits (694), Expect = 1e-70
 Identities = 145/207 (70%), Positives = 160/207 (77%), Gaps = 3/207 (1%)
 Frame = -1

Query: 974 SLSINLVQLFFILFSV-ILTSSLALSST--KIDGYTITGRVKLEGLGAKGFGLPAKISNA 804
           S + +L    FI F   IL SS A S T    DGYTI GRVK+   G K F LPAK+SN 
Sbjct: 3   SFTKSLFLFLFIQFCFSILPSSFAQSPTPGSSDGYTIYGRVKIPSFGTKEFSLPAKVSNV 62

Query: 803 KIVLNGGQRVTFLRPDGYFSFHDVPAGTHLIEVAATGYFFSPVRVDVSARNRGKIQAALT 624
           K++LNGGQRV+FLRPDGYFSFH+VPAGTHLIEV A GYFFSPVRVDVSARN GKIQAALT
Sbjct: 63  KVILNGGQRVSFLRPDGYFSFHNVPAGTHLIEVVAKGYFFSPVRVDVSARNPGKIQAALT 122

Query: 623 ETRRGLTELVLEPLREELYYEIREPFSILSLLKSPXXXXXXXXXXXXXXMPKLMENMDPE 444
           E RRGL+E VLEPL+EE YYEIREPFSI+S++KSP              MPKLMENMDPE
Sbjct: 123 ENRRGLSEFVLEPLKEEQYYEIREPFSIMSIVKSPMGLMMGFMLIVVFLMPKLMENMDPE 182

Query: 443 EMKQAQEQMRNQGVPSLASLLPGAGRS 363
           EMK+AQE+MRNQGVPSLASLLPGA RS
Sbjct: 183 EMKRAQEEMRNQGVPSLASLLPGAARS 209


>ref|XP_004136363.1| PREDICTED: ER membrane protein complex subunit 7 homolog [Cucumis
           sativus] gi|449517192|ref|XP_004165630.1| PREDICTED: ER
           membrane protein complex subunit 7 homolog [Cucumis
           sativus]
          Length = 206

 Score =  271 bits (693), Expect = 2e-70
 Identities = 141/202 (69%), Positives = 163/202 (80%), Gaps = 5/202 (2%)
 Frame = -1

Query: 953 QLFFILFSV-----ILTSSLALSSTKIDGYTITGRVKLEGLGAKGFGLPAKISNAKIVLN 789
           QLFF+L S+     +LTSS A+SS   DGYTI GRVK+     KGFGLP K SN K++LN
Sbjct: 4   QLFFLLLSLQLFFSLLTSSHAISSGSGDGYTIYGRVKIPSNTLKGFGLPGKTSNIKVILN 63

Query: 788 GGQRVTFLRPDGYFSFHDVPAGTHLIEVAATGYFFSPVRVDVSARNRGKIQAALTETRRG 609
           GGQRVTFLRPDGYFSFH+VPAGTHLIEVAA G FFSPVRVDVSARN GK+QAALTE RR 
Sbjct: 64  GGQRVTFLRPDGYFSFHNVPAGTHLIEVAALGSFFSPVRVDVSARNPGKVQAALTENRRV 123

Query: 608 LTELVLEPLREELYYEIREPFSILSLLKSPXXXXXXXXXXXXXXMPKLMENMDPEEMKQA 429
           L+ELVLEPLR+E YYE+REPF+I+S++KSP              MPKLMEN+DPEEM++A
Sbjct: 124 LSELVLEPLRDEEYYEVREPFNIMSVVKSPMGLMVGFMVIVVFLMPKLMENIDPEEMRRA 183

Query: 428 QEQMRNQGVPSLASLLPGAGRS 363
           QE+MRNQGVP+L+SLLPGAGRS
Sbjct: 184 QEEMRNQGVPTLSSLLPGAGRS 205


>ref|XP_002515481.1| conserved hypothetical protein [Ricinus communis]
           gi|223545425|gb|EEF46930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 210

 Score =  268 bits (684), Expect = 2e-69
 Identities = 139/201 (69%), Positives = 161/201 (80%), Gaps = 1/201 (0%)
 Frame = -1

Query: 965 INLVQLFFILFSV-ILTSSLALSSTKIDGYTITGRVKLEGLGAKGFGLPAKISNAKIVLN 789
           +NL+   F  F V +L  +LA+SS   DG++I GRVK+ GLG KGFGLP K+S+ K+VLN
Sbjct: 10  VNLI--LFAQFCVSLLLPALAVSSGSSDGHSINGRVKIGGLGIKGFGLPGKLSSVKVVLN 67

Query: 788 GGQRVTFLRPDGYFSFHDVPAGTHLIEVAATGYFFSPVRVDVSARNRGKIQAALTETRRG 609
           GGQ +TFLRPDGYFSFH+VPAGTHLIEVAA GYFFSPVRVDVSAR  GK+QAALTE RRG
Sbjct: 68  GGQNITFLRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARFPGKVQAALTENRRG 127

Query: 608 LTELVLEPLREELYYEIREPFSILSLLKSPXXXXXXXXXXXXXXMPKLMENMDPEEMKQA 429
           L ELVLEP+R+E YYEIREPFSI+S++KSP              MPKLMENMDPEEM++A
Sbjct: 128 LNELVLEPMRDEQYYEIREPFSIMSVVKSPMGLMVGFMLVVMFLMPKLMENMDPEEMRRA 187

Query: 428 QEQMRNQGVPSLASLLPGAGR 366
           QE+MR QGVPSLASLLPGA R
Sbjct: 188 QEEMRQQGVPSLASLLPGAQR 208


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