BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008847
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation...   409   e-111
ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|1...   407   e-111
ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...   400   e-109
ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...   398   e-108
ref|XP_003600862.1| Eukaryotic translation initiation factor 3 s...   387   e-105

>ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F
            [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed
            protein product [Vitis vinifera]
          Length = 285

 Score =  409 bits (1050), Expect = e-111
 Identities = 209/278 (75%), Positives = 231/278 (83%)
 Frame = -2

Query: 1175 AVLQFYPLATSLTAKIHPVVIFNICDCYVRRADQAERVIGTLLGSVLPDGTVDIRNSYAV 996
            AVLQF+P +TSL+AK+HP+VIFNICDCYVRR DQAERVIGTLLGS+ PDGTVDIRNSYAV
Sbjct: 7    AVLQFFPSSTSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVDIRNSYAV 66

Query: 995  PHNESSDQVALDIDYHHNMLVSHQKVNPKEVIVGWYSTGFGVTAGSALIHDFYSREVQNP 816
            PHNESSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTG GVT GSALIH+FYSREVQNP
Sbjct: 67   PHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSREVQNP 126

Query: 815  IHMTVDTGFTNGEASIKAFVSVNLSLGDRPLATQFQEVPLDLRMVEAERVGFNILKTTMV 636
            IH+TVDT F NGEA+IKAFVSV+LSLG+R LA QFQE+PLDLRMVEAERVGF+ILKTTMV
Sbjct: 127  IHLTVDTTFRNGEATIKAFVSVSLSLGERQLAAQFQEIPLDLRMVEAERVGFDILKTTMV 186

Query: 635  DKLPNDLEGMESSMEKLLALXXXXXXXXXXXVEGRVAADNKIGRFISDTVASVPKIPPAA 456
            +KLP+DLEGME+SME+LLAL           VEG+V  DN IGRFI+DTVAS+PKI P A
Sbjct: 187  EKLPSDLEGMEASMERLLALIDDVYKYVDSVVEGQVVPDNDIGRFIADTVASIPKISPPA 246

Query: 455  FDKXXXXXXXXXXXXXXXXXXXXXXLSLAEKLNTAAQI 342
            FD+                      LSLAEKLNTAAQI
Sbjct: 247  FDRLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQI 284


>ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|118484603|gb|ABK94175.1|
            unknown [Populus trichocarpa] gi|222864212|gb|EEF01343.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  407 bits (1046), Expect = e-111
 Identities = 212/289 (73%), Positives = 234/289 (80%), Gaps = 1/289 (0%)
 Frame = -2

Query: 1202 MAATNEQAGAVLQFYPLATS-LTAKIHPVVIFNICDCYVRRADQAERVIGTLLGSVLPDG 1026
            MAA  +Q   VLQF P ++S L+AK+HP+VIFNICDCYVRR DQAERVIGTLLGSVLPDG
Sbjct: 1    MAAIEQQT--VLQFAPSSSSTLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDG 58

Query: 1025 TVDIRNSYAVPHNESSDQVALDIDYHHNMLVSHQKVNPKEVIVGWYSTGFGVTAGSALIH 846
            TVDIRNSYAVPHNESS+QVALDIDYHHN+L+SHQKVNPKEVIVGWYSTG GVT GSALIH
Sbjct: 59   TVDIRNSYAVPHNESSEQVALDIDYHHNLLLSHQKVNPKEVIVGWYSTGLGVTGGSALIH 118

Query: 845  DFYSREVQNPIHMTVDTGFTNGEASIKAFVSVNLSLGDRPLATQFQEVPLDLRMVEAERV 666
            DFYSREV NPIH+TVDTGF+NGE +IKA+VSVNLSLGDRPLA QFQEVPLDLRMVEAER+
Sbjct: 119  DFYSREVPNPIHLTVDTGFSNGEGTIKAYVSVNLSLGDRPLAAQFQEVPLDLRMVEAERI 178

Query: 665  GFNILKTTMVDKLPNDLEGMESSMEKLLALXXXXXXXXXXXVEGRVAADNKIGRFISDTV 486
            GF++LKTTMVDK+P+DLEGME SM++LLAL           VEG  A DN IGRFISDTV
Sbjct: 179  GFDVLKTTMVDKIPSDLEGMEISMQRLLALIDDVYKYVDDVVEGHTAPDNNIGRFISDTV 238

Query: 485  ASVPKIPPAAFDKXXXXXXXXXXXXXXXXXXXXXXLSLAEKLNTAAQIL 339
            AS+PK+ P  FDK                      LSLAEKLNTAAQIL
Sbjct: 239  ASLPKLSPPVFDKLVNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 287


>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F-like
            [Cucumis sativus] gi|449517876|ref|XP_004165970.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit F-like [Cucumis sativus]
          Length = 285

 Score =  400 bits (1028), Expect = e-109
 Identities = 205/278 (73%), Positives = 226/278 (81%)
 Frame = -2

Query: 1172 VLQFYPLATSLTAKIHPVVIFNICDCYVRRADQAERVIGTLLGSVLPDGTVDIRNSYAVP 993
            VLQF   + +L+AK+HP+VIFNICDCYVRR DQA+RVIGTLLGSVLPDGTVDIRNSYAVP
Sbjct: 8    VLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVP 67

Query: 992  HNESSDQVALDIDYHHNMLVSHQKVNPKEVIVGWYSTGFGVTAGSALIHDFYSREVQNPI 813
            HNE SDQVALDIDYHHNML SHQKVNPKEVIVGWYSTG GVT GSALIH+FYSREV NPI
Sbjct: 68   HNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPI 127

Query: 812  HMTVDTGFTNGEASIKAFVSVNLSLGDRPLATQFQEVPLDLRMVEAERVGFNILKTTMVD 633
            H+TVDTGF NGE +IKA++SVNLSLGDR LA QFQE+PLDLRMVEAER+GF+ILKTT +D
Sbjct: 128  HLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTTSID 187

Query: 632  KLPNDLEGMESSMEKLLALXXXXXXXXXXXVEGRVAADNKIGRFISDTVASVPKIPPAAF 453
            KLPNDLEGME+SME+LLAL           VEG V ADN IGRF++DTVAS+PK+ PAAF
Sbjct: 188  KLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAF 247

Query: 452  DKXXXXXXXXXXXXXXXXXXXXXXLSLAEKLNTAAQIL 339
            DK                      LSLAEKLNTAAQIL
Sbjct: 248  DKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285


>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative [Ricinus
            communis] gi|223533763|gb|EEF35495.1| eukaryotic
            translation initiation factor 3f, eif3f, putative
            [Ricinus communis]
          Length = 287

 Score =  398 bits (1023), Expect = e-108
 Identities = 207/288 (71%), Positives = 231/288 (80%), Gaps = 2/288 (0%)
 Frame = -2

Query: 1196 ATNEQAGAVLQFY--PLATSLTAKIHPVVIFNICDCYVRRADQAERVIGTLLGSVLPDGT 1023
            A +EQ   VLQF   P +T L+AK+HP+VIFNICDCYVRR DQAERVIGTLLGSVLPDGT
Sbjct: 2    AASEQT--VLQFTSAPSSTGLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT 59

Query: 1022 VDIRNSYAVPHNESSDQVALDIDYHHNMLVSHQKVNPKEVIVGWYSTGFGVTAGSALIHD 843
            VDIRNSYAVPHNESSDQVALDIDYHHNML+SHQKVNPKEVIVGWYSTG GVT GSALIH+
Sbjct: 60   VDIRNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHE 119

Query: 842  FYSREVQNPIHMTVDTGFTNGEASIKAFVSVNLSLGDRPLATQFQEVPLDLRMVEAERVG 663
            FYSREV NP+H+TVDTGF NGE +IKA+VSVNLSLGDR LA QFQE+PLDLRM+EAERVG
Sbjct: 120  FYSREVPNPVHLTVDTGFRNGEGTIKAYVSVNLSLGDRQLAAQFQEIPLDLRMLEAERVG 179

Query: 662  FNILKTTMVDKLPNDLEGMESSMEKLLALXXXXXXXXXXXVEGRVAADNKIGRFISDTVA 483
            ++ILKTTMVDK+P+DLEGME SM++LLAL           VEGR A DN IGR+I DTV 
Sbjct: 180  YDILKTTMVDKIPSDLEGMEVSMQRLLALIDDVYKYVDDVVEGRAAPDNSIGRYIFDTVG 239

Query: 482  SVPKIPPAAFDKXXXXXXXXXXXXXXXXXXXXXXLSLAEKLNTAAQIL 339
            ++PK+ P+AFDK                      LSLAEKLNTAAQIL
Sbjct: 240  ALPKLSPSAFDKLVNNGLQDHLLLLYLSSIARTQLSLAEKLNTAAQIL 287


>ref|XP_003600862.1| Eukaryotic translation initiation factor 3 subunit F [Medicago
            truncatula] gi|217073538|gb|ACJ85129.1| unknown [Medicago
            truncatula] gi|355489910|gb|AES71113.1| Eukaryotic
            translation initiation factor 3 subunit F [Medicago
            truncatula]
          Length = 288

 Score =  387 bits (994), Expect = e-105
 Identities = 203/291 (69%), Positives = 228/291 (78%), Gaps = 3/291 (1%)
 Frame = -2

Query: 1202 MAATNEQAGAVLQFYPLATS---LTAKIHPVVIFNICDCYVRRADQAERVIGTLLGSVLP 1032
            MA+TN     VLQF   ++S   L+AK+HP+V+FNICDCYVRR DQAERVIGTLLGSVLP
Sbjct: 1    MASTNR---TVLQFSSSSSSSQSLSAKVHPLVVFNICDCYVRRPDQAERVIGTLLGSVLP 57

Query: 1031 DGTVDIRNSYAVPHNESSDQVALDIDYHHNMLVSHQKVNPKEVIVGWYSTGFGVTAGSAL 852
            DGTVDIRNSYAVPHNES DQVALDI+YHHNML+SHQKVN KE+IVGWYSTG GVT GSAL
Sbjct: 58   DGTVDIRNSYAVPHNESVDQVALDIEYHHNMLLSHQKVNQKEIIVGWYSTGLGVTGGSAL 117

Query: 851  IHDFYSREVQNPIHMTVDTGFTNGEASIKAFVSVNLSLGDRPLATQFQEVPLDLRMVEAE 672
            IH+FYSREV NPIH+TVDTGFT G  +IKA+VS NLSLGDR +A QFQE+PLDLRMVEAE
Sbjct: 118  IHEFYSREVPNPIHLTVDTGFTAGGGTIKAYVSNNLSLGDRQIAAQFQEIPLDLRMVEAE 177

Query: 671  RVGFNILKTTMVDKLPNDLEGMESSMEKLLALXXXXXXXXXXXVEGRVAADNKIGRFISD 492
            R+GF+ILK T VDK+P+DLEGME+SME LLAL           VEGRVA DNKIG+FISD
Sbjct: 178  RIGFDILKATTVDKIPSDLEGMEASMEHLLALINDIYKYVDDVVEGRVAPDNKIGKFISD 237

Query: 491  TVASVPKIPPAAFDKXXXXXXXXXXXXXXXXXXXXXXLSLAEKLNTAAQIL 339
             V S+PK+PP+ FDK                      LSLAEKLNTAAQIL
Sbjct: 238  AVGSLPKLPPSDFDKLVNDSLQDHLLMVYLSSITRTQLSLAEKLNTAAQIL 288