BLASTX nr result

ID: Coptis24_contig00008840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008840
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510354.1| protein phosphatase 2c, putative [Ricinus co...    69   3e-10
ref|XP_002868114.1| hypothetical protein ARALYDRAFT_493218 [Arab...    62   6e-08
ref|NP_193391.3| putative protein phosphatase 2C 55 [Arabidopsis...    61   8e-08
ref|XP_003544423.1| PREDICTED: probable protein phosphatase 2C 5...    57   2e-06
ref|XP_002281672.1| PREDICTED: probable protein phosphatase 2C 5...    56   3e-06

>ref|XP_002510354.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223551055|gb|EEF52541.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 512

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   SDFDVLNQQKNLSFVEALSRTFSVPSVSGPHLRFCGHHIDHLLSGPPQVSPVSVLQ-RLP 179
           SD  ++N+++N+S V ALSRTFSVPSVSGP  + CG+HID  LSG  QVS    LQ RL 
Sbjct: 74  SDLQLVNRKRNISVVGALSRTFSVPSVSGPSFQVCGYHIDRALSGTTQVSDSGKLQKRLM 133

Query: 180 PAVACDS 200
            A A  S
Sbjct: 134 AACASKS 140


>ref|XP_002868114.1| hypothetical protein ARALYDRAFT_493218 [Arabidopsis lyrata subsp.
           lyrata] gi|297313950|gb|EFH44373.1| hypothetical protein
           ARALYDRAFT_493218 [Arabidopsis lyrata subsp. lyrata]
          Length = 467

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   SDFDVLNQQKNLSFVEALSRTFSVPSVSGPHLRFCGHHIDHLLSGP 140
           SD  ++N+++NLS V A+SRTFSVPSVSGP  + CG+HID LLS P
Sbjct: 45  SDLLLINERRNLSVVGAVSRTFSVPSVSGPAFQVCGYHIDLLLSDP 90


>ref|NP_193391.3| putative protein phosphatase 2C 55 [Arabidopsis thaliana]
           gi|226739227|sp|Q9SUK9.2|P2C55_ARATH RecName:
           Full=Probable protein phosphatase 2C 55; Short=AtPP2C55
           gi|332658373|gb|AEE83773.1| putative protein phosphatase
           2C 55 [Arabidopsis thaliana]
          Length = 467

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   SDFDVLNQQKNLSFVEALSRTFSVPSVSGPHLRFCGHHIDHLLSGP 140
           SD  ++N+++NLS + A+SRTFSVPSVSGP  + CG+HID LLS P
Sbjct: 45  SDLLLINERRNLSVIGAVSRTFSVPSVSGPAFQVCGYHIDLLLSDP 90


>ref|XP_003544423.1| PREDICTED: probable protein phosphatase 2C 55-like [Glycine max]
          Length = 506

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 35/50 (70%)
 Frame = +3

Query: 3   SDFDVLNQQKNLSFVEALSRTFSVPSVSGPHLRFCGHHIDHLLSGPPQVS 152
           S  ++  +++ LS V+ LSRTFSVPSVSGP  + CG+HI   L+GP Q S
Sbjct: 68  SSSELAGKRRTLSVVDTLSRTFSVPSVSGPSFQVCGYHIGSALAGPDQFS 117


>ref|XP_002281672.1| PREDICTED: probable protein phosphatase 2C 55-like [Vitis vinifera]
          Length = 519

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/64 (50%), Positives = 39/64 (60%)
 Frame = +3

Query: 3   SDFDVLNQQKNLSFVEALSRTFSVPSVSGPHLRFCGHHIDHLLSGPPQVSPVSVLQRLPP 182
           SD  + NQ++ LS V  LSR FS+PSVSGP L+ C +HID  LS P   S VS   +  P
Sbjct: 74  SDSHLGNQRRTLSVVGTLSRAFSIPSVSGPSLQACAYHIDSALSKPGVFSYVS---QKTP 130

Query: 183 AVAC 194
             AC
Sbjct: 131 MAAC 134


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