BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008829
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519306.1| nucleic acid binding protein, putative [Rici...   124   1e-26
ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arab...   120   1e-25
ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]...   120   1e-25
gb|AAM61614.1| unknown [Arabidopsis thaliana]                         120   1e-25
dbj|BAB02742.1| unnamed protein product [Arabidopsis thaliana]        120   1e-25

>ref|XP_002519306.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223541621|gb|EEF43170.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 455

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/142 (41%), Positives = 87/142 (61%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKDDFYYSSSFMAGDYKWQIKLYPRGSGMTKDASISV 338
           ECLS+I  SST    W+ E FS+L  +   S +F+AGD +W+I+LYP+G G+     +S+
Sbjct: 309 ECLSMIKSSSTSKNLWRFENFSKLDAECNDSKTFVAGDQRWKIQLYPKGKGLGSGTHLSL 368

Query: 337 YLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFWFTEQGAGYGFPNFVSLDALN 158
           +LAL   T    G K+  D+ LR+ DQ++  H+  K NFWF+   +  G+  F  LD L 
Sbjct: 369 FLALADLTAITPGFKILADFTLRILDQSRGSHLFGKANFWFSASSSVCGWSRFYPLDQLY 428

Query: 157 DNTKGFLLKDTCIIEAEVLVLG 92
            ++  +L KDTC+ EAE+ VLG
Sbjct: 429 ASSNAYLFKDTCLGEAEITVLG 450



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
 Frame = -3

Query: 511 LSLITDSSTINYSWKIERFSQLKDDFYYSSSFMAGDYKWQIKLYPRGS-GMTKDASISVY 335
           +S ++D+S  +Y+ KI+ FS L  + Y S SF AG YKW++ LYP+G+        +S+Y
Sbjct: 160 VSTMSDASPTHYTVKIQLFSLLAVEKYESGSFEAGGYKWKLVLYPKGNKSKNVMEHLSLY 219

Query: 334 LALDRSTPFPKGQKVYVDYKLRVRDQTQSEH-IEKKTNFWFTEQGAGYGFPNFVSLDALN 158
           +A+  S+    G +V+V ++L + DQ +  + I       F      +GF   + L  L 
Sbjct: 220 IAMADSSNLQLGWEVHVVFRLFLLDQIRDNYLILPGKECRFHGFRLEWGFDQLIPLATLK 279

Query: 157 DNTKGFLLKDTCIIEAEVLV 98
           D   G+L++DTC+  AEV V
Sbjct: 280 DTKNGYLVEDTCVFGAEVFV 299


>ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arabidopsis lyrata subsp.
           lyrata] gi|297328898|gb|EFH59317.1| hypothetical protein
           ARALYDRAFT_479214 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/145 (37%), Positives = 85/145 (58%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKDDFYYSSSFMAGDYKWQIKLYPRGSGMTKDASISV 338
           ECLS+I D+++  + WKIE FS+L  + Y S++F AGD KW+++ YP G+       +S+
Sbjct: 163 ECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKVRFYPTGTKQGTGTHLSI 222

Query: 337 YLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFWFTEQGAGYGFPNFVSLDALN 158
           YL L        G K++V++ +R+ DQ Q  HI  K   WF+   + +G+  +VS+    
Sbjct: 223 YLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFT 282

Query: 157 DNTKGFLLKDTCIIEAEVLVLGTVS 83
               G LLKD C++EA+V V G  S
Sbjct: 283 QPNSGLLLKDVCLVEADVCVHGITS 307



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKD---DFYYSSSFMAGDYKWQIKLYPRG--SGMTKD 353
           E +  I+D+   +Y  KIE FS L     + Y + SF AG YKW++ LYP G  S  TKD
Sbjct: 9   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 68

Query: 352 ASISVYLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFW-FTEQGAGYGFPNFV 176
             +SVYLAL  S+    G +VY  ++L + DQ +  ++  + N   F      +GF  F+
Sbjct: 69  -HVSVYLALADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHAVKREWGFDKFI 127

Query: 175 SLDALNDNTKGFLLKDTCIIEAEVLV 98
                +D + G+L++DTC+  A+V V
Sbjct: 128 PTGTFSDASNGYLMEDTCMFGADVFV 153


>ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]
           gi|332642426|gb|AEE75947.1| TRAF-like family protein
           [Arabidopsis thaliana]
          Length = 309

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/145 (38%), Positives = 85/145 (58%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKDDFYYSSSFMAGDYKWQIKLYPRGSGMTKDASISV 338
           ECLS+I D+++  + WKIE FS+L  + Y S++F AGD KW+I+ YP G+       +S+
Sbjct: 163 ECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSI 222

Query: 337 YLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFWFTEQGAGYGFPNFVSLDALN 158
           YL L        G K++V++ +R+ DQ Q  HI  K   WF+   + +G+  +VS+    
Sbjct: 223 YLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFT 282

Query: 157 DNTKGFLLKDTCIIEAEVLVLGTVS 83
               G LLKD C++EA+V V G  S
Sbjct: 283 QPNSGLLLKDVCLVEADVCVHGITS 307



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKD---DFYYSSSFMAGDYKWQIKLYPRG--SGMTKD 353
           E +  I+D+   +Y  KIE FS L     + Y + SF AG YKW++ LYP G  S  TKD
Sbjct: 9   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 68

Query: 352 ASISVYLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFW-FTEQGAGYGFPNFV 176
             +SVYL+L  S+    G +VY  ++L + DQ +  ++  + N   F      +GF  F+
Sbjct: 69  -HVSVYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFI 127

Query: 175 SLDALNDNTKGFLLKDTCIIEAEVLV 98
                +D + G+L++DTC+  A+V V
Sbjct: 128 PTGTFSDASNGYLMEDTCMFGADVFV 153


>gb|AAM61614.1| unknown [Arabidopsis thaliana]
          Length = 309

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/145 (38%), Positives = 85/145 (58%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKDDFYYSSSFMAGDYKWQIKLYPRGSGMTKDASISV 338
           ECLS+I D+++  + WKIE FS+L  + Y S++F AGD KW+I+ YP G+       +S+
Sbjct: 163 ECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSI 222

Query: 337 YLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFWFTEQGAGYGFPNFVSLDALN 158
           YL L        G K++V++ +R+ DQ Q  HI  K   WF+   + +G+  +VS+    
Sbjct: 223 YLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFT 282

Query: 157 DNTKGFLLKDTCIIEAEVLVLGTVS 83
               G LLKD C++EA+V V G  S
Sbjct: 283 QPNSGLLLKDVCLVEADVCVHGITS 307



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKD---DFYYSSSFMAGDYKWQIKLYPRG--SGMTKD 353
           E +  I+D+   +Y  KIE FS L     + Y + SF AG YKW++ LYP G  S  TKD
Sbjct: 9   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 68

Query: 352 ASISVYLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFW-FTEQGAGYGFPNFV 176
             +SVYLAL  S+    G +VY  ++L + DQ +  ++  + N   F      +GF  F+
Sbjct: 69  -HVSVYLALADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFI 127

Query: 175 SLDALNDNTKGFLLKDTCIIEAEVLV 98
                +D++ G+L++DTC+  A+V V
Sbjct: 128 PTGTFSDSSNGYLMEDTCMFGADVFV 153


>dbj|BAB02742.1| unnamed protein product [Arabidopsis thaliana]
          Length = 304

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/145 (38%), Positives = 85/145 (58%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKDDFYYSSSFMAGDYKWQIKLYPRGSGMTKDASISV 338
           ECLS+I D+++  + WKIE FS+L  + Y S++F AGD KW+I+ YP G+       +S+
Sbjct: 158 ECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSI 217

Query: 337 YLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFWFTEQGAGYGFPNFVSLDALN 158
           YL L        G K++V++ +R+ DQ Q  HI  K   WF+   + +G+  +VS+    
Sbjct: 218 YLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFT 277

Query: 157 DNTKGFLLKDTCIIEAEVLVLGTVS 83
               G LLKD C++EA+V V G  S
Sbjct: 278 QPNSGLLLKDVCLVEADVCVHGITS 302



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
 Frame = -3

Query: 517 ECLSLITDSSTINYSWKIERFSQLKD---DFYYSSSFMAGDYKWQIKLYPRG--SGMTKD 353
           E +  I+D+   +Y  KIE FS L     + Y + SF AG YKW++ LYP G  S  TKD
Sbjct: 4   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 63

Query: 352 ASISVYLALDRSTPFPKGQKVYVDYKLRVRDQTQSEHIEKKTNFW-FTEQGAGYGFPNFV 176
             +SVYL+L  S+    G +VY  ++L + DQ +  ++  + N   F      +GF  F+
Sbjct: 64  -HVSVYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFI 122

Query: 175 SLDALNDNTKGFLLKDTCIIEAEVLV 98
                +D + G+L++DTC+  A+V V
Sbjct: 123 PTGTFSDASNGYLMEDTCMFGADVFV 148