BLASTX nr result
ID: Coptis24_contig00008827
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008827
(1559 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 160 7e-37
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 153 1e-34
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 151 5e-34
ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471... 140 7e-31
emb|CBI32919.3| unnamed protein product [Vitis vinifera] 139 2e-30
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 160 bits (406), Expect = 7e-37
Identities = 126/428 (29%), Positives = 212/428 (49%), Gaps = 15/428 (3%)
Frame = +2
Query: 110 SKRHENEDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSK 289
S+ E+ D IS+LPD +L +ILSFLPTKFAVGTSILS RWR+LW SV LDF D L +
Sbjct: 3 SEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNP 62
Query: 290 ATTKKDYLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQDCDAVHFNKWVSNAIKRKVQ 469
+T + +R F NFVD V L+ VS + KF L +D + W+ A++R+VQ
Sbjct: 63 STL-VELEERIIMFQNFVDGV--LRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQ 119
Query: 470 ELILSITKEHPSVFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQ 649
EL L + + P F C++L +K+ +++ +P+++ LK LHL ++ +SD
Sbjct: 120 ELDLHLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVE-YSDD 178
Query: 650 SSVQEVSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIECWSINGSH-------DCE 808
S+Q++ P+LEEL VN+ P+L++L+I ++ +H D +
Sbjct: 179 DSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYK 238
Query: 809 IKIDAESLISLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTID-------RLGS 967
+ +DA +L L + I + ++ + +
Sbjct: 239 VVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYE 298
Query: 968 LLGAIYNVRNLELNVESIESISSPVFSARMHSLSRLVHLTVLRGSCSTGKKFINMLCDML 1147
LLG I NV+ L L +++S+S + ++ + + L L N L
Sbjct: 299 LLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSP 358
Query: 1148 YIETLVLPDGLCSYDFSGDGRILG-TTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSV 1324
+E LV+ G + + +G ++ P C + HLK ++I+ G + EL V++L+K+
Sbjct: 359 NLEALVIETGYTN-ELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNA 417
Query: 1325 KEVDKLRI 1348
+ + ++ I
Sbjct: 418 EVLQQMTI 425
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 153 bits (386), Expect = 1e-34
Identities = 133/421 (31%), Positives = 198/421 (47%), Gaps = 14/421 (3%)
Frame = +2
Query: 128 EDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTKKD 307
E I +LPD +L +ILSFL T+ AV TSILS +W LW S NL F F + K+
Sbjct: 25 EKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF-----FGLKSPKR- 78
Query: 308 YLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQ-DCDAVHFNKWVSNAIKRKVQELILS 484
+ F++FVDRVL L+G SN+ +F L+C+ D W+S A+ R V++L L
Sbjct: 79 -----KLFMDFVDRVLALRGP--SNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLE 131
Query: 485 ITKEHPS-VFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSVQ 661
+ S V PHCLF CE+L+ L+I M + +PSSI S LK+L+L Y F+D S Q
Sbjct: 132 LRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNL-YEVIFTDDHSTQ 190
Query: 662 EVSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIE--CWSINGS-HDCEIKIDAESL 832
++ +LP L EL + C W+ + V+I P LQ L I C S S C ++I L
Sbjct: 191 QL-FSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHL 249
Query: 833 ISLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTIDRLGSLLGAIYNVRNLELNV 1012
+ + T I + S T R LL I + ++L L
Sbjct: 250 ADFTI-IGTLSNDYCLYESSVVETCISIFSAADKPRQTAY-RASKLLEGISSAQSLCLTT 307
Query: 1013 ESIESISSP----VFSARMHSLSRLVHLTVLRGSCSTGKKFI-----NMLCDMLYIETLV 1165
++ + F +L+ L+ + S G I +++ Y ++
Sbjct: 308 NVVDVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMP 367
Query: 1166 LPDGLCSYDFSGDGRILGTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKEVDKLR 1345
C D++ L +P CFLS LK + + F G EL V FL+K+ ++ +
Sbjct: 368 KVPSNCREDWT-----LDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMD 422
Query: 1346 I 1348
I
Sbjct: 423 I 423
>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
predicted protein [Populus trichocarpa]
Length = 420
Score = 151 bits (381), Expect = 5e-34
Identities = 135/431 (31%), Positives = 200/431 (46%), Gaps = 8/431 (1%)
Frame = +2
Query: 137 ISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTKKDYLK 316
I+ LPD +L +ILSFL TK AV TSILS +W LW S+ NL+F + Y K
Sbjct: 40 INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEF-----------HQCYFK 88
Query: 317 RKRP-FINFVDRVLFLQGKNVSNVHKFSLTCQDCDAVHFNKWVSNAIKRKVQELILSITK 493
KR F+N V+RVL L ++ SN+ KF+L+C DA WVS A+ R V+EL ++ +
Sbjct: 89 AKRKIFMNSVERVLLL--RDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYE 146
Query: 494 EHPS---VFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSVQE 664
S V P CLFTC +L+ LKI + + SSI LK+L L ++ F D+ S Q+
Sbjct: 147 GGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHV-VFPDEDSTQQ 205
Query: 665 VSLNLPILEELAFYNCAWLKIKTVNIVVP---TLQVLKIECWSINGSHDCEIKIDAESLI 835
+ LNL LE+L W +K + I P +L + ++ + GS C + I +L
Sbjct: 206 I-LNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALT 264
Query: 836 SLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTIDRLGSLLGAIYNVRNLELNVE 1015
+D + + SL+ A ++V E
Sbjct: 265 FFSFS-------------------------GGFWDDYCLFKSSSLVEAYFHVYGC---YE 296
Query: 1016 SIESISSPVFSARMHSLSRLVHLTVLRGSCSTGKKFINMLCDMLYIE-TLVLPDGLCSYD 1192
I+ + + LS + HLT + D+L IE + LP D
Sbjct: 297 RSREIAHRAYK-HIVGLSTVKHLT--------------LTPDVLKIELSEELPTNCAKDD 341
Query: 1193 FSGDGRILGTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKEVDKLRIRLTRPRSE 1372
+ IL P CF S LK ++I+DF G+ EL V L+K+ +D + I + SE
Sbjct: 342 W-----ILEPVPPCFQSCLKCIEIRDFGGLIDELDAVALLLKNAIALDDMVITCSTTGSE 396
Query: 1373 TRVNWKEQIIE 1405
+ +EQ+ E
Sbjct: 397 GQRKIREQLFE 407
>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
Length = 453
Score = 140 bits (354), Expect = 7e-31
Identities = 125/458 (27%), Positives = 209/458 (45%), Gaps = 17/458 (3%)
Frame = +2
Query: 122 ENEDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTK 301
E E IS L + IL ILSFLPT AV TS+LS W +W S+ L F D L K
Sbjct: 18 EGEGIISKLHESILGKILSFLPTTDAVHTSVLSKGWIHVWKSITGLQFNDAL---HPLGK 74
Query: 302 KDYLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQDCDAVHFNKWVSNAIKRKVQELIL 481
K +K F+ FV +V+ + LTC D+ + W+S+ ++R VQ L +
Sbjct: 75 K---MQKEHFVCFVKKVILHLANSSIQSFSLCLTCYHYDSTLVSAWISSILQRGVQNLHI 131
Query: 482 SITKEHPSVFPHC-LFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSV 658
E +FP C LF+C SL L ++M ++VP L+ L ++ I+ S+ S+
Sbjct: 132 QYADE--ILFPSCSLFSCNSLVQLVLQMKCTISVPIFSSLPNLQNLSISGIRLVSESSNY 189
Query: 659 QE-VSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIECWS--INGSHDCEIKIDAES 829
E + LN P+L+ L C WL + + I P L+ I W+ N SH IKI A +
Sbjct: 190 SEDLILNFPVLKVLEARGCEWLTKQNIGIKAPLLERFSIAIWNSLSNKSHKSAIKIFAPN 249
Query: 830 LISLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTI-----DRLGSLLGAIYNVR 994
L I L + IH+ + + D++ ++ + V
Sbjct: 250 LADFS-------------YGGDLEQEIILLNSASIHSASVVIVADEDKMTNVGKLGFQVH 296
Query: 995 NLELNVESIESISSPVFSARMHSLSRLVH------LTVLRGSCSTGKKFINMLCDMLYIE 1156
L + ++ + + MH+ H L+ L+ + TG+ +N+L + +
Sbjct: 297 KLLAQIREVKQLKLLFYKVLMHARDIFTHLPAFSRLSYLQLNEVTGEALLNILNNCPILS 356
Query: 1157 TLVLPDGLCSYDFSGDGRIL--GTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKE 1330
+LVL +G+ S +L + P+CFLS LK+ K+F EL KF++ +
Sbjct: 357 SLVLQNGVSE---SNKDHVLTSASVPQCFLSSLKVFQFKEFNVREHELLLAKFVLANAAV 413
Query: 1331 VDKLRIRLTRPRSETRVNWKEQIIEKLDKYVKSSNCVL 1444
++++ I + ++ E++ +++ + K SN V+
Sbjct: 414 LEQMIICTAFWLRYSEID-VEKVKDQILSFPKCSNLVM 450
>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 139 bits (350), Expect = 2e-30
Identities = 125/416 (30%), Positives = 188/416 (45%), Gaps = 7/416 (1%)
Frame = +2
Query: 122 ENEDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTK 301
++ DRIS+LPD +L +I+SFLPTKFAVGTS+LS RWR+LW S+ NLDF D LL +
Sbjct: 7 KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPI 66
Query: 302 KDYLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQDCDA-VHFNKWVSNAIKRKVQELI 478
D +R F NFVD+VL L G ++S + KF L C D + N W+ A++R VQEL
Sbjct: 67 GD-SERSICFKNFVDKVL-LHG-SISCIRKFRLKCSDHELDSAVNSWICTALERNVQELD 123
Query: 479 LSITKEHPSVFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSV 658
L E+P P F C++L LK+
Sbjct: 124 LYFDTEYPIELPPKFFFCKTLVVLKL---------------------------------- 149
Query: 659 QEVSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIECWSINGSHDCEIKIDAESLIS 838
P+LEEL + N+ PTL+ L I ++ +DA +L
Sbjct: 150 ------CPVLEELVIERWRLDEQWVFNVSAPTLKSLAIY------FSKYKLVVDAPNLEY 197
Query: 839 LKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTI--DRLGSLLGAIYNVRNLELNV 1012
L + + + R +D + R+ LL I NV++L L+
Sbjct: 198 LSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSG 257
Query: 1013 ESIESISSPVFSARM---HSLSRLVHLTVLRGSCSTGKKFINMLCDML-YIETLVLPDGL 1180
E++ S+S + HS++RL L G +F+ D +E L+L +
Sbjct: 258 ETLHSLSGMFCGYELPAFHSVTRL----ELEVDYGYGLEFLKEFLDTSPNLEILILENVN 313
Query: 1181 CSYDFSGDGRILGTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKEVDKLRI 1348
+ + P C HL V+IK F G++ EL ++FL+K+ + + K+ I
Sbjct: 314 KDECEIEEWTLPLQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369