BLASTX nr result

ID: Coptis24_contig00008827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008827
         (1559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   160   7e-37
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-34
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-34
ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471...   140   7e-31
emb|CBI32919.3| unnamed protein product [Vitis vinifera]              139   2e-30

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  160 bits (406), Expect = 7e-37
 Identities = 126/428 (29%), Positives = 212/428 (49%), Gaps = 15/428 (3%)
 Frame = +2

Query: 110  SKRHENEDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSK 289
            S+  E+ D IS+LPD +L +ILSFLPTKFAVGTSILS RWR+LW SV  LDF D L  + 
Sbjct: 3    SEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNP 62

Query: 290  ATTKKDYLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQDCDAVHFNKWVSNAIKRKVQ 469
            +T   +  +R   F NFVD V  L+   VS + KF L  +D +      W+  A++R+VQ
Sbjct: 63   STL-VELEERIIMFQNFVDGV--LRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQ 119

Query: 470  ELILSITKEHPSVFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQ 649
            EL L +  +     P   F C++L  +K+   +++ +P+++    LK LHL  ++ +SD 
Sbjct: 120  ELDLHLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVE-YSDD 178

Query: 650  SSVQEVSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIECWSINGSH-------DCE 808
             S+Q++    P+LEEL            VN+  P+L++L+I  ++   +H       D +
Sbjct: 179  DSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYK 238

Query: 809  IKIDAESLISLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTID-------RLGS 967
            + +DA +L  L +                    I +        ++  +        +  
Sbjct: 239  VVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYE 298

Query: 968  LLGAIYNVRNLELNVESIESISSPVFSARMHSLSRLVHLTVLRGSCSTGKKFINMLCDML 1147
            LLG I NV+ L L   +++S+S  +   ++ +   +  L  L           N L    
Sbjct: 299  LLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSP 358

Query: 1148 YIETLVLPDGLCSYDFSGDGRILG-TTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSV 1324
             +E LV+  G  + +   +G ++    P C + HLK ++I+   G + EL  V++L+K+ 
Sbjct: 359  NLEALVIETGYTN-ELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNA 417

Query: 1325 KEVDKLRI 1348
            + + ++ I
Sbjct: 418  EVLQQMTI 425


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  153 bits (386), Expect = 1e-34
 Identities = 133/421 (31%), Positives = 198/421 (47%), Gaps = 14/421 (3%)
 Frame = +2

Query: 128  EDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTKKD 307
            E  I +LPD +L +ILSFL T+ AV TSILS +W  LW S  NL F     F   + K+ 
Sbjct: 25   EKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF-----FGLKSPKR- 78

Query: 308  YLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQ-DCDAVHFNKWVSNAIKRKVQELILS 484
                 + F++FVDRVL L+G   SN+ +F L+C+   D      W+S A+ R V++L L 
Sbjct: 79   -----KLFMDFVDRVLALRGP--SNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLE 131

Query: 485  ITKEHPS-VFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSVQ 661
            +     S V PHCLF CE+L+ L+I M   + +PSSI  S LK+L+L Y   F+D  S Q
Sbjct: 132  LRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNL-YEVIFTDDHSTQ 190

Query: 662  EVSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIE--CWSINGS-HDCEIKIDAESL 832
            ++  +LP L EL  + C W+ +  V+I  P LQ L I   C S   S   C ++I    L
Sbjct: 191  QL-FSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHL 249

Query: 833  ISLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTIDRLGSLLGAIYNVRNLELNV 1012
                + + T                I + S       T   R   LL  I + ++L L  
Sbjct: 250  ADFTI-IGTLSNDYCLYESSVVETCISIFSAADKPRQTAY-RASKLLEGISSAQSLCLTT 307

Query: 1013 ESIESISSP----VFSARMHSLSRLVHLTVLRGSCSTGKKFI-----NMLCDMLYIETLV 1165
              ++ +        F     +L+ L+  +      S G   I     +++    Y  ++ 
Sbjct: 308  NVVDVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMP 367

Query: 1166 LPDGLCSYDFSGDGRILGTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKEVDKLR 1345
                 C  D++     L  +P CFLS LK + +  F G   EL  V FL+K+   ++ + 
Sbjct: 368  KVPSNCREDWT-----LDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMD 422

Query: 1346 I 1348
            I
Sbjct: 423  I 423


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  151 bits (381), Expect = 5e-34
 Identities = 135/431 (31%), Positives = 200/431 (46%), Gaps = 8/431 (1%)
 Frame = +2

Query: 137  ISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTKKDYLK 316
            I+ LPD +L +ILSFL TK AV TSILS +W  LW S+ NL+F            + Y K
Sbjct: 40   INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEF-----------HQCYFK 88

Query: 317  RKRP-FINFVDRVLFLQGKNVSNVHKFSLTCQDCDAVHFNKWVSNAIKRKVQELILSITK 493
             KR  F+N V+RVL L  ++ SN+ KF+L+C   DA     WVS A+ R V+EL ++  +
Sbjct: 89   AKRKIFMNSVERVLLL--RDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYE 146

Query: 494  EHPS---VFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSVQE 664
               S   V P CLFTC +L+ LKI     + + SSI    LK+L L ++  F D+ S Q+
Sbjct: 147  GGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHV-VFPDEDSTQQ 205

Query: 665  VSLNLPILEELAFYNCAWLKIKTVNIVVP---TLQVLKIECWSINGSHDCEIKIDAESLI 835
            + LNL  LE+L      W  +K + I  P   +L + ++    + GS  C + I   +L 
Sbjct: 206  I-LNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALT 264

Query: 836  SLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTIDRLGSLLGAIYNVRNLELNVE 1015
                                              +D  + +  SL+ A ++V       E
Sbjct: 265  FFSFS-------------------------GGFWDDYCLFKSSSLVEAYFHVYGC---YE 296

Query: 1016 SIESISSPVFSARMHSLSRLVHLTVLRGSCSTGKKFINMLCDMLYIE-TLVLPDGLCSYD 1192
                I+   +   +  LS + HLT              +  D+L IE +  LP      D
Sbjct: 297  RSREIAHRAYK-HIVGLSTVKHLT--------------LTPDVLKIELSEELPTNCAKDD 341

Query: 1193 FSGDGRILGTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKEVDKLRIRLTRPRSE 1372
            +     IL   P CF S LK ++I+DF G+  EL  V  L+K+   +D + I  +   SE
Sbjct: 342  W-----ILEPVPPCFQSCLKCIEIRDFGGLIDELDAVALLLKNAIALDDMVITCSTTGSE 396

Query: 1373 TRVNWKEQIIE 1405
             +   +EQ+ E
Sbjct: 397  GQRKIREQLFE 407


>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
          Length = 453

 Score =  140 bits (354), Expect = 7e-31
 Identities = 125/458 (27%), Positives = 209/458 (45%), Gaps = 17/458 (3%)
 Frame = +2

Query: 122  ENEDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTK 301
            E E  IS L + IL  ILSFLPT  AV TS+LS  W  +W S+  L F D L       K
Sbjct: 18   EGEGIISKLHESILGKILSFLPTTDAVHTSVLSKGWIHVWKSITGLQFNDAL---HPLGK 74

Query: 302  KDYLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQDCDAVHFNKWVSNAIKRKVQELIL 481
            K    +K  F+ FV +V+     +        LTC   D+   + W+S+ ++R VQ L +
Sbjct: 75   K---MQKEHFVCFVKKVILHLANSSIQSFSLCLTCYHYDSTLVSAWISSILQRGVQNLHI 131

Query: 482  SITKEHPSVFPHC-LFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSV 658
                E   +FP C LF+C SL  L ++M   ++VP       L+ L ++ I+  S+ S+ 
Sbjct: 132  QYADE--ILFPSCSLFSCNSLVQLVLQMKCTISVPIFSSLPNLQNLSISGIRLVSESSNY 189

Query: 659  QE-VSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIECWS--INGSHDCEIKIDAES 829
             E + LN P+L+ L    C WL  + + I  P L+   I  W+   N SH   IKI A +
Sbjct: 190  SEDLILNFPVLKVLEARGCEWLTKQNIGIKAPLLERFSIAIWNSLSNKSHKSAIKIFAPN 249

Query: 830  LISLKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTI-----DRLGSLLGAIYNVR 994
            L                         I L +   IH+ + +     D++ ++    + V 
Sbjct: 250  LADFS-------------YGGDLEQEIILLNSASIHSASVVIVADEDKMTNVGKLGFQVH 296

Query: 995  NLELNVESIESISSPVFSARMHSLSRLVH------LTVLRGSCSTGKKFINMLCDMLYIE 1156
             L   +  ++ +    +   MH+     H      L+ L+ +  TG+  +N+L +   + 
Sbjct: 297  KLLAQIREVKQLKLLFYKVLMHARDIFTHLPAFSRLSYLQLNEVTGEALLNILNNCPILS 356

Query: 1157 TLVLPDGLCSYDFSGDGRIL--GTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKE 1330
            +LVL +G+     S    +L   + P+CFLS LK+   K+F     EL   KF++ +   
Sbjct: 357  SLVLQNGVSE---SNKDHVLTSASVPQCFLSSLKVFQFKEFNVREHELLLAKFVLANAAV 413

Query: 1331 VDKLRIRLTRPRSETRVNWKEQIIEKLDKYVKSSNCVL 1444
            ++++ I        + ++  E++ +++  + K SN V+
Sbjct: 414  LEQMIICTAFWLRYSEID-VEKVKDQILSFPKCSNLVM 450


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  139 bits (350), Expect = 2e-30
 Identities = 125/416 (30%), Positives = 188/416 (45%), Gaps = 7/416 (1%)
 Frame = +2

Query: 122  ENEDRISHLPDHILHYILSFLPTKFAVGTSILSTRWRFLWTSVHNLDFCDMLLFSKATTK 301
            ++ DRIS+LPD +L +I+SFLPTKFAVGTS+LS RWR+LW S+ NLDF D LL  +    
Sbjct: 7    KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPI 66

Query: 302  KDYLKRKRPFINFVDRVLFLQGKNVSNVHKFSLTCQDCDA-VHFNKWVSNAIKRKVQELI 478
             D  +R   F NFVD+VL L G ++S + KF L C D +     N W+  A++R VQEL 
Sbjct: 67   GD-SERSICFKNFVDKVL-LHG-SISCIRKFRLKCSDHELDSAVNSWICTALERNVQELD 123

Query: 479  LSITKEHPSVFPHCLFTCESLSTLKIKMTVYVAVPSSICFSLLKVLHLTYIKFFSDQSSV 658
            L    E+P   P   F C++L  LK+                                  
Sbjct: 124  LYFDTEYPIELPPKFFFCKTLVVLKL---------------------------------- 149

Query: 659  QEVSLNLPILEELAFYNCAWLKIKTVNIVVPTLQVLKIECWSINGSHDCEIKIDAESLIS 838
                   P+LEEL        +    N+  PTL+ L I           ++ +DA +L  
Sbjct: 150  ------CPVLEELVIERWRLDEQWVFNVSAPTLKSLAIY------FSKYKLVVDAPNLEY 197

Query: 839  LKLEVCTXXXXXXXXXXXXXXXXIKLPSCHRIHNDTTI--DRLGSLLGAIYNVRNLELNV 1012
            L +                    + +    R  +D  +   R+  LL  I NV++L L+ 
Sbjct: 198  LSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSG 257

Query: 1013 ESIESISSPVFSARM---HSLSRLVHLTVLRGSCSTGKKFINMLCDML-YIETLVLPDGL 1180
            E++ S+S       +   HS++RL     L      G +F+    D    +E L+L +  
Sbjct: 258  ETLHSLSGMFCGYELPAFHSVTRL----ELEVDYGYGLEFLKEFLDTSPNLEILILENVN 313

Query: 1181 CSYDFSGDGRILGTTPRCFLSHLKLVDIKDFRGINSELWFVKFLVKSVKEVDKLRI 1348
                   +  +    P C   HL  V+IK F G++ EL  ++FL+K+ + + K+ I
Sbjct: 314  KDECEIEEWTLPLQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369


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