BLASTX nr result
ID: Coptis24_contig00008824
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008824 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19932.3| unnamed protein product [Vitis vinifera] 55 4e-10 ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent R... 55 4e-10 ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-09 ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent R... 54 7e-09 ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent R... 54 7e-09 >emb|CBI19932.3| unnamed protein product [Vitis vinifera] Length = 786 Score = 55.5 bits (132), Expect(2) = 4e-10 Identities = 25/32 (78%), Positives = 31/32 (96%) Frame = -3 Query: 97 KRYIKLSDNDRVTASGKVKTESGSKVKSTKTG 2 K+YIKL++ +RVTASGK+KTESGSKVK+TKTG Sbjct: 654 KKYIKLNNGERVTASGKIKTESGSKVKATKTG 685 Score = 33.5 bits (75), Expect(2) = 4e-10 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = -1 Query: 147 STGLQKQKSDYHWDKNAR 94 S+GLQKQKS YHWDK + Sbjct: 637 SSGLQKQKSVYHWDKRGK 654 >ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like [Vitis vinifera] Length = 784 Score = 55.5 bits (132), Expect(2) = 4e-10 Identities = 25/32 (78%), Positives = 31/32 (96%) Frame = -3 Query: 97 KRYIKLSDNDRVTASGKVKTESGSKVKSTKTG 2 K+YIKL++ +RVTASGK+KTESGSKVK+TKTG Sbjct: 652 KKYIKLNNGERVTASGKIKTESGSKVKATKTG 683 Score = 33.5 bits (75), Expect(2) = 4e-10 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = -1 Query: 147 STGLQKQKSDYHWDKNAR 94 S+GLQKQKS YHWDK + Sbjct: 635 SSGLQKQKSVYHWDKRGK 652 >ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|222856918|gb|EEE94465.1| predicted protein [Populus trichocarpa] Length = 174 Score = 55.8 bits (133), Expect(2) = 3e-09 Identities = 25/32 (78%), Positives = 31/32 (96%) Frame = -3 Query: 97 KRYIKLSDNDRVTASGKVKTESGSKVKSTKTG 2 K+YIKL++ DRVTASGK+KTESG+KVK+TKTG Sbjct: 41 KKYIKLNNGDRVTASGKIKTESGAKVKATKTG 72 Score = 30.4 bits (67), Expect(2) = 3e-09 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 147 STGLQKQKSDYHWDK 103 S GLQKQK+ YHWDK Sbjct: 24 SGGLQKQKTVYHWDK 38 >ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like [Cucumis sativus] Length = 789 Score = 53.5 bits (127), Expect(2) = 7e-09 Identities = 23/32 (71%), Positives = 30/32 (93%) Frame = -3 Query: 97 KRYIKLSDNDRVTASGKVKTESGSKVKSTKTG 2 K+Y+KL++ DRVTASGK+KTESG+KVK+ KTG Sbjct: 657 KKYVKLNNGDRVTASGKIKTESGAKVKANKTG 688 Score = 31.2 bits (69), Expect(2) = 7e-09 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -1 Query: 147 STGLQKQKSDYHWDKNAR 94 S+G+QK KS YHWDK ++ Sbjct: 640 SSGMQKNKSVYHWDKRSK 657 >ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like [Cucumis sativus] Length = 789 Score = 53.5 bits (127), Expect(2) = 7e-09 Identities = 23/32 (71%), Positives = 30/32 (93%) Frame = -3 Query: 97 KRYIKLSDNDRVTASGKVKTESGSKVKSTKTG 2 K+Y+KL++ DRVTASGK+KTESG+KVK+ KTG Sbjct: 657 KKYVKLNNGDRVTASGKIKTESGAKVKANKTG 688 Score = 31.2 bits (69), Expect(2) = 7e-09 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -1 Query: 147 STGLQKQKSDYHWDKNAR 94 S+G+QK KS YHWDK ++ Sbjct: 640 SSGMQKNKSVYHWDKRSK 657