BLASTX nr result
ID: Coptis24_contig00008821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008821 (1262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 184 3e-44 gb|ACN32036.1| unknown [Zea mays] 142 2e-31 gb|ACL54615.1| unknown [Zea mays] 140 7e-31 ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|2... 140 9e-31 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 139 1e-30 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 184 bits (468), Expect = 3e-44 Identities = 94/231 (40%), Positives = 147/231 (63%), Gaps = 4/231 (1%) Frame = +3 Query: 255 PPVNT--SYLFPNISHMVSIKLNKENYLMWKQLFLPIFITFDLTGFIDGTKLSPPKFLID 428 PP+ T + N++ MV KLN++NY+ W+ LF+P+ F L G ++G L PP F+ D Sbjct: 257 PPIMTLGTISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRD 316 Query: 429 NNGNITTQLNPAYITWLKKDQMFFIWLNAMLSEDLLPYVVGLSSSRQLWLTLEKRLATIS 608 +G T N ++ TW ++DQ+ IW+N+ LS+DLLP +G+ SR LW +LE+R + S Sbjct: 317 PSG--TCVPNASFETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGAS 374 Query: 609 TAHIIQLKSRLPSLVKGSSSMAEYLQKIKVIADSLAAVSAPMADSDLVYHTLRELPADYS 788 H+ L+S++ ++ KG SSM ++L IK I++ LAA P+++SDLV + L LP +Y Sbjct: 375 RTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYE 434 Query: 789 SFTTSIRTRSQNDPVSVDELHSLILSEELAIDER--NGASVNT*QMQAFAA 935 SF SI TR N+ V+ DELH L+LS+E+++ +R +S + A+AA Sbjct: 435 SFVDSIETR--NESVTADELHGLLLSKEISLQKRKTRASSSSNAPFHAYAA 483 >gb|ACN32036.1| unknown [Zea mays] Length = 376 Score = 142 bits (357), Expect = 2e-31 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 4/211 (1%) Frame = +3 Query: 252 VPPVNTSYLFPNISHMVSIKLNKENYLMWKQLFLPIFITFDLTGFIDGTKLSPPKFLI-- 425 V V +S P S MVS+KLN ENYL+W LP + L+G IDG+ +P + + Sbjct: 10 VAAVFSSMPTPAFSQMVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVD 69 Query: 426 --DNNGNITTQLNPAYITWLKKDQMFFIWLNAMLSEDLLPYVVGLSSSRQLWLTLEKRLA 599 + +G T +NP + +W +DQ+ +N+ LSE++L VV +++R W TLE+ A Sbjct: 70 PAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYA 129 Query: 600 TISTAHIIQLKSRLPSLVKGSSSMAEYLQKIKVIADSLAAVSAPMADSDLVYHTLRELPA 779 + S A I+Q++ +L ++ KG + AEY +K+K +AD+LAAV + D + + + LR LPA Sbjct: 130 SSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRLEDEEFISYLLRGLPA 189 Query: 780 DYSSFTTSIRTRSQNDPVSVDELHSLILSEE 872 DY S TSI TR D ++ ++++ +LS E Sbjct: 190 DYDSLVTSITTRP--DTYTISDVYAHLLSFE 218 >gb|ACL54615.1| unknown [Zea mays] Length = 376 Score = 140 bits (353), Expect = 7e-31 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 4/211 (1%) Frame = +3 Query: 252 VPPVNTSYLFPNISHMVSIKLNKENYLMWKQLFLPIFITFDLTGFIDGTKLSPPKFLI-- 425 V V +S P S MVS+KLN ENYL+W LP + L+G IDG+ +P + + Sbjct: 10 VAAVFSSMPTPAFSQMVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVD 69 Query: 426 --DNNGNITTQLNPAYITWLKKDQMFFIWLNAMLSEDLLPYVVGLSSSRQLWLTLEKRLA 599 + +G T +NP + +W +DQ+ +N+ LSE++L VV +++R W TLE+ A Sbjct: 70 PAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYA 129 Query: 600 TISTAHIIQLKSRLPSLVKGSSSMAEYLQKIKVIADSLAAVSAPMADSDLVYHTLRELPA 779 + S I+Q++ +L ++ KG + AEY +K+K +AD+LAAV + D + + + LR LPA Sbjct: 130 SSSRVRIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRLEDEEFISYLLRGLPA 189 Query: 780 DYSSFTTSIRTRSQNDPVSVDELHSLILSEE 872 DY S TSI TR D ++ ++++ +LS E Sbjct: 190 DYDSLVTSITTRP--DTYTISDVYAHLLSFE 218 >ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|222839735|gb|EEE78058.1| predicted protein [Populus trichocarpa] Length = 270 Score = 140 bits (352), Expect = 9e-31 Identities = 78/224 (34%), Positives = 128/224 (57%), Gaps = 3/224 (1%) Frame = +3 Query: 231 SSALSMAVPPVNTSYLFPNISHMVSIKLNKENYLMWKQLFLPIFITFDLTGFIDGTKLSP 410 SS+ + PP T N+ ++IKL+ NY +WK +P F DL G++DGT P Sbjct: 4 SSSSNSTTPP--TIPTLSNLPFTMTIKLHSSNYPVWKAQVVPYFCGHDLYGYLDGTISIP 61 Query: 411 PKFLI---DNNGNITTQLNPAYITWLKKDQMFFIWLNAMLSEDLLPYVVGLSSSRQLWLT 581 PK L +G T NP Y WL++D + +N+ L+ED+L V+ ++SR++WL Sbjct: 62 PKELNISDSTSGTSQTIPNPLYHQWLRQDSLILATINSSLTEDVLTQVMSYTTSREVWLA 121 Query: 582 LEKRLATISTAHIIQLKSRLPSLVKGSSSMAEYLQKIKVIADSLAAVSAPMADSDLVYHT 761 LE +++S A +IQ++++L + KG+ + E+ +K +AD LA P+ + D++ + Sbjct: 122 LENNFSSLSRAKVIQIRTQLANAKKGAMTANEFFLSVKRMADELALAGQPLPNDDIITYI 181 Query: 762 LRELPADYSSFTTSIRTRSQNDPVSVDELHSLILSEELAIDERN 893 L L +Y S ++I +R DPVS++EL SL+L E I+ N Sbjct: 182 LAGLGQEYDSLASTISSR--RDPVSLEELFSLLLICESRINHNN 223 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 139 bits (351), Expect = 1e-30 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 1/221 (0%) Frame = +3 Query: 276 LFPNISHMVSIKLN-KENYLMWKQLFLPIFITFDLTGFIDGTKLSPPKFLIDNNGNITTQ 452 + P + ++S+KL+ NYL WK FL + DL GFIDGT+ PPK + Sbjct: 13 ILPPSTTIISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACPPKHTASGS------ 66 Query: 453 LNPAYITWLKKDQMFFIWLNAMLSEDLLPYVVGLSSSRQLWLTLEKRLATISTAHIIQLK 632 LNPAY+ W KKD W+ A LSE L+ + GL +S+Q+W L+ R ++ S + I LK Sbjct: 67 LNPAYVVWQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLK 126 Query: 633 SRLPSLVKGSSSMAEYLQKIKVIADSLAAVSAPMADSDLVYHTLRELPADYSSFTTSIRT 812 +L +L +G+ S +EYL+ K +AD LAA P+ D DL+ L L + Y+ F TS Sbjct: 127 RQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQSSYTPFVTSFNF 186 Query: 813 RSQNDPVSVDELHSLILSEELAIDERNGASVNT*QMQAFAA 935 S+ + ++ + +L E +D + AFAA Sbjct: 187 ASRETDFTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFAA 227