BLASTX nr result

ID: Coptis24_contig00008818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008818
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282970.1| PREDICTED: probable polyamine oxidase 2 [Vit...    80   1e-13
ref|XP_003551948.1| PREDICTED: probable polyamine oxidase 2-like...    76   3e-12
ref|XP_003532069.1| PREDICTED: probable polyamine oxidase 2-like...    76   3e-12
ref|XP_003617318.1| Polyamine oxidase [Medicago truncatula] gi|3...    76   3e-12
ref|XP_003545339.1| PREDICTED: probable polyamine oxidase 2-like...    75   5e-12

>ref|XP_002282970.1| PREDICTED: probable polyamine oxidase 2 [Vitis vinifera]
           gi|302143503|emb|CBI22064.3| unnamed protein product
           [Vitis vinifera]
          Length = 490

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = +3

Query: 228 KKVSIYPNNEKKQKISPTVVVIXXXXXXXXXXXXXHDASFKVVLLESRKRIGGRACTDYK 407
           ++   Y N E++Q  SP+V+VI             HDASF+VVLLESR RIGGR  TDY 
Sbjct: 12  RRALCYANIERQQATSPSVIVIGAGMAGIAAARALHDASFRVVLLESRDRIGGRVHTDYS 71

Query: 408 FGFPVDMGASW 440
           FGFPVD+GASW
Sbjct: 72  FGFPVDLGASW 82


>ref|XP_003551948.1| PREDICTED: probable polyamine oxidase 2-like [Glycine max]
          Length = 490

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +3

Query: 243 YPNNEKKQKISPTVVVIXXXXXXXXXXXXXHDASFKVVLLESRKRIGGRACTDYKFGFPV 422
           Y N+ K+Q  SP+V+VI             H+ASF+VVLLESR RIGGR  TDY FGFPV
Sbjct: 17  YGNDGKQQGRSPSVIVIGGGMAGIAAARALHNASFQVVLLESRDRIGGRIHTDYSFGFPV 76

Query: 423 DMGASW 440
           D+GASW
Sbjct: 77  DLGASW 82


>ref|XP_003532069.1| PREDICTED: probable polyamine oxidase 2-like [Glycine max]
          Length = 490

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/66 (57%), Positives = 44/66 (66%)
 Frame = +3

Query: 243 YPNNEKKQKISPTVVVIXXXXXXXXXXXXXHDASFKVVLLESRKRIGGRACTDYKFGFPV 422
           Y N+  +Q  SP+V+VI             HDAS +VVLLESR+RIGGR  TDY FGFPV
Sbjct: 17  YANDGNQQGRSPSVIVIGGGMAGIAAARSLHDASLQVVLLESRERIGGRIHTDYSFGFPV 76

Query: 423 DMGASW 440
           DMGASW
Sbjct: 77  DMGASW 82


>ref|XP_003617318.1| Polyamine oxidase [Medicago truncatula] gi|355518653|gb|AET00277.1|
           Polyamine oxidase [Medicago truncatula]
          Length = 488

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +3

Query: 228 KKVSIYPNNEKKQKISPTVVVIXXXXXXXXXXXXXHDASFKVVLLESRKRIGGRACTDYK 407
           +K   Y N +++ + SP+V+VI             HDASF+VVLLESR RIGGR  TDY 
Sbjct: 12  RKGLCYVNVDQQPRRSPSVIVIGGGMAGIAAARALHDASFQVVLLESRDRIGGRIHTDYS 71

Query: 408 FGFPVDMGASW 440
           FGFPVD+GASW
Sbjct: 72  FGFPVDLGASW 82


>ref|XP_003545339.1| PREDICTED: probable polyamine oxidase 2-like [Glycine max]
          Length = 489

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/64 (54%), Positives = 46/64 (71%)
 Frame = +3

Query: 249 NNEKKQKISPTVVVIXXXXXXXXXXXXXHDASFKVVLLESRKRIGGRACTDYKFGFPVDM 428
           N++K+Q+ SP+V+VI              DASF+V+LLESR+R+GGR  TDY FGFPVD+
Sbjct: 19  NDDKQQERSPSVIVIGGGMAGIAAARALQDASFQVILLESRERLGGRIHTDYSFGFPVDL 78

Query: 429 GASW 440
           GASW
Sbjct: 79  GASW 82


Top