BLASTX nr result
ID: Coptis24_contig00008817
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008817 (648 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24709.3| unnamed protein product [Vitis vinifera] 92 8e-17 ref|XP_002275001.1| PREDICTED: formin-like protein 1-like [Vitis... 92 8e-17 ref|XP_002310397.1| predicted protein [Populus trichocarpa] gi|2... 61 2e-07 ref|XP_002885725.1| predicted protein [Arabidopsis lyrata subsp.... 56 7e-06 >emb|CBI24709.3| unnamed protein product [Vitis vinifera] Length = 651 Score = 92.0 bits (227), Expect = 8e-17 Identities = 60/135 (44%), Positives = 75/135 (55%), Gaps = 6/135 (4%) Frame = -1 Query: 564 NISSLIVPHTSNRKSISPKXXXXXXXXXLCSVAFIFTVVLLIYYRRRRDNKTSRSDSHRL 385 NISSLI P +S+RK +SPK L +VA I +L+Y+RR+ K RSDS RL Sbjct: 98 NISSLIFPQSSSRKGVSPKLVAIAVGVSLAAVALIAIAAVLLYHRRQPKRKDPRSDSLRL 157 Query: 384 YPSNTALXXXXXXXXXXXXXXXXXXXXXXXAEFLYLGTLVNSRGID----ANSVDAAANN 217 YP+NTA+ +EFLYLGTLVNSRG+D ANS +A Sbjct: 158 YPANTAV-----SDGIQHHKQPRSSISGTSSEFLYLGTLVNSRGVDDDAAANSSNAGTKR 212 Query: 216 ISSS--PYQKLGSPE 178 +S+ PYQKL SPE Sbjct: 213 SASASPPYQKLSSPE 227 >ref|XP_002275001.1| PREDICTED: formin-like protein 1-like [Vitis vinifera] Length = 932 Score = 92.0 bits (227), Expect = 8e-17 Identities = 60/135 (44%), Positives = 75/135 (55%), Gaps = 6/135 (4%) Frame = -1 Query: 564 NISSLIVPHTSNRKSISPKXXXXXXXXXLCSVAFIFTVVLLIYYRRRRDNKTSRSDSHRL 385 NISSLI P +S+RK +SPK L +VA I +L+Y+RR+ K RSDS RL Sbjct: 97 NISSLIFPQSSSRKGVSPKLVAIAVGVSLAAVALIAIAAVLLYHRRQPKRKDPRSDSLRL 156 Query: 384 YPSNTALXXXXXXXXXXXXXXXXXXXXXXXAEFLYLGTLVNSRGID----ANSVDAAANN 217 YP+NTA+ +EFLYLGTLVNSRG+D ANS +A Sbjct: 157 YPANTAV-----SDGIQHHKQPRSSISGTSSEFLYLGTLVNSRGVDDDAAANSSNAGTKR 211 Query: 216 ISSS--PYQKLGSPE 178 +S+ PYQKL SPE Sbjct: 212 SASASPPYQKLSSPE 226 >ref|XP_002310397.1| predicted protein [Populus trichocarpa] gi|222853300|gb|EEE90847.1| predicted protein [Populus trichocarpa] Length = 948 Score = 61.2 bits (147), Expect = 2e-07 Identities = 56/147 (38%), Positives = 66/147 (44%), Gaps = 18/147 (12%) Frame = -1 Query: 564 NISSLIVPHTSNRKSISPKXXXXXXXXXLCSVAFIFTVVLL----IYYRRRRD----NKT 409 NISSL++PH S+ SP S+ F + LL IY RRR K Sbjct: 99 NISSLLLPHRSS----SPHHNLIISISISLSLLFAALLALLSAFFIYSRRRTQPFSPQKG 154 Query: 408 SRSDSHRLYPSNTALXXXXXXXXXXXXXXXXXXXXXXXAEFLYLGTLVNSR-GIDANSVD 232 SRS+S RLYP NT +EFLYLGTLVNS+ GID Sbjct: 155 SRSESLRLYPQNTI---PSDGSPKIPKLPHRPGVVSTSSEFLYLGTLVNSQAGIDDQDKP 211 Query: 231 AAANNI---------SSSPYQKLGSPE 178 + +N SSS YQKLGSPE Sbjct: 212 TSTSNAVLKTGVSSSSSSHYQKLGSPE 238 >ref|XP_002885725.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297331565|gb|EFH61984.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1054 Score = 55.8 bits (133), Expect = 7e-06 Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 14/143 (9%) Frame = -1 Query: 564 NISSLIVPHTSNRKSISPKXXXXXXXXXLCSVAFIFTVVLLIYYRRRR---------DNK 412 NISSLIVPH + + + K + S A + ++ L+Y+RRRR D+K Sbjct: 90 NISSLIVPH-ATKSPPNSKKLLIVAISAVSSAALVALLIALLYWRRRRTNQDLNFSDDSK 148 Query: 411 TSRSD-SHRLY----PSNTALXXXXXXXXXXXXXXXXXXXXXXXAEFLYLGTLVNSRGID 247 T +D S R+Y P+ A +EFLYLGT+VN RGI+ Sbjct: 149 TYTTDSSRRVYPPPPPATAAPTRRNAEARSKQRTTTRTSSTNNSSEFLYLGTMVNQRGIE 208 Query: 246 ANSVDAAANNISSSPYQKLGSPE 178 S+ +NN SSS +KL SP+ Sbjct: 209 EQSL---SNNGSSS--RKLESPD 226