BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008805
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    84   6e-14
ref|XP_003628573.1| F-box family-1 [Medicago truncatula] gi|3555...    65   3e-08
ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...    63   1e-07
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471...    60   9e-07

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
 Frame = +3

Query: 30  GHNYHR-ISKFFGKICNVKVLHLSIHTITDFFELDTIGDY-LPEFASLTDLRVFVDCDDY 203
           G +YH  I +  G+I NVK L L+  T+       TIGDY LP F ++T L        +
Sbjct: 289 GISYHGPIYELLGRISNVKCLSLTGVTLDSLS--GTIGDYKLPTFHNMTRLEFL-----F 341

Query: 204 ENNFDFGCLISILHKMPNINSFIFEAPVSCVLIEHGPTLEI-VPQCVQSHLKSVELRFYT 380
              F++  L + LH  PN+ + + E   +  LI  G  + + VP C+  HLK +E+R   
Sbjct: 342 IGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIV 401

Query: 381 GSDLELCLVKFLLKNAMALEKITVMASWNLSRNPEMQVEVFKQLLRLPRGS-ACSVI 548
           G D EL  V++LLKNA  L+++T+    +     + +  V K+LL LPRGS +C V+
Sbjct: 402 GEDYELEAVEYLLKNAEVLQQMTIDCHESYM---DQEFCVCKKLLGLPRGSRSCFVV 455


>ref|XP_003628573.1| F-box family-1 [Medicago truncatula] gi|355522595|gb|AET03049.1|
           F-box family-1 [Medicago truncatula]
          Length = 524

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
 Frame = +3

Query: 63  GKICNVKVLHLSIHTITDFFEL------------DTIGDYLPEFASLTDLRVFVDCDDYE 206
           G   ++K+ H ++   TD   L              + DY PEF  L  ++  + C    
Sbjct: 292 GDYVHLKMCHSTLKFCTDIVPLLVFIMYKQWTLHAPVLDY-PEFRQLNHIKFILPC---- 346

Query: 207 NNFDFGCLISILHKMPNINSFIFEAPVSCVLIEHGP--TLE----IVPQCVQSHLKSVEL 368
             F+   L+++LHK   +   I ++       EH P  TLE     VP C++SHL  +++
Sbjct: 347 --FNSNLLVTVLHKCDMLKFLIIQSDKE----EHSPLRTLEPQSITVPGCLKSHLTYIQI 400

Query: 369 RFYTGSDLELCLVKFLLKNAMALEKITVMASWNLSRNPEMQVEVFKQLLRLPRGSACSVI 548
             Y G + EL   +++L+N + LE + +    + S +P  +    K+LL +PRGSA   I
Sbjct: 401 EGYQGCEDELAFAEYILRNGLVLEAMLIYV--DASMDPTNKYCSVKRLLEIPRGSAKCQI 458

Query: 549 DF 554
            F
Sbjct: 459 RF 460


>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 49/170 (28%), Positives = 83/170 (48%)
 Frame = +3

Query: 45  RISKFFGKICNVKVLHLSIHTITDFFELDTIGDYLPEFASLTDLRVFVDCDDYENNFDFG 224
           ++ K   +IC V+ L L ++ +        I  +LP F  LT L +        N     
Sbjct: 7   QVHKLLTQICEVEQLKLLLYKV--LVHAADIFTHLPVFGKLTYLLL--------NEVTGE 56

Query: 225 CLISILHKMPNINSFIFEAPVSCVLIEHGPTLEIVPQCVQSHLKSVELRFYTGSDLELCL 404
            L+++LH  P +N+ I +  V   L E   T   VPQC  S LK  + + +   + EL L
Sbjct: 57  ALLNLLHNSPMLNTLILQNGVFD-LNEDMLTSASVPQCFLSSLKVFQFKGFNVHEHELLL 115

Query: 405 VKFLLKNAMALEKITVMASWNLSRNPEMQVEVFKQLLRLPRGSACSVIDF 554
            KF++ NA  LE++T+  ++ L  +     +V +Q+L  P+ S+  +I+F
Sbjct: 116 AKFVMANATVLERMTLSTAFWLQYSDIDMEKVKEQILSFPKRSSFVMIEF 165


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
 Frame = +3

Query: 45  RISKFFGKICNVKVLHLS---IHTITDFFELDTIGDYLPEFASLTDLRVFVDCDDYENNF 215
           RI +    I NVK L LS   +H+++  F     G  LP F S+T L + VD   Y    
Sbjct: 239 RIYELLRGISNVKHLSLSGETLHSLSGMF----CGYELPAFHSVTRLELEVD---YGYGL 291

Query: 216 DFGCLISILHKMPNINSFIFEA--PVSCVLIEHGPTLEIVPQCVQSHLKSVELRFYTGSD 389
           +F  L   L   PN+   I E      C + E    L+ VP CV+ HL  VE++ + G D
Sbjct: 292 EF--LKEFLDTSPNLEILILENVNKDECEIEEWTLPLQ-VPTCVELHLNEVEIKKFDGLD 348

Query: 390 LELCLVKFLLKNAMALEKITV 452
            EL  ++FLLKNA  L+K+++
Sbjct: 349 YELGAIEFLLKNARVLKKMSI 369


>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
          Length = 453

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
 Frame = +3

Query: 45  RISKFFGKICNVKVLHLSIHTITDFFELDTIGDYLPEFASLTDLRVFVDCDDYENNFDFG 224
           ++ K   +I  VK L L  + +        I  +LP F+ L+ L++        N     
Sbjct: 294 QVHKLLAQIREVKQLKLLFYKV--LMHARDIFTHLPAFSRLSYLQL--------NEVTGE 343

Query: 225 CLISILHKMPNINSFIFEAPVSCVLIEHGPTLEIVPQCVQSHLKSVELRFYTGSDLELCL 404
            L++IL+  P ++S + +  VS    +H  T   VPQC  S LK  + + +   + EL L
Sbjct: 344 ALLNILNNCPILSSLVLQNGVSESNKDHVLTSASVPQCFLSSLKVFQFKEFNVREHELLL 403

Query: 405 VKFLLKNAMALEKITVMASWNLSRNPEMQVEVFK-QLLRLPRGSACSVIDF 554
            KF+L NA  LE++ +  ++ L R  E+ VE  K Q+L  P+ S   +I F
Sbjct: 404 AKFVLANAAVLEQMIICTAFWL-RYSEIDVEKVKDQILSFPKCSNLVMIQF 453