BLASTX nr result
ID: Coptis24_contig00008800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008800
(249 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera] 70 2e-10
ref|XP_002532127.1| leucine-rich repeat containing protein, puta... 68 7e-10
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2... 68 7e-10
ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichoca... 66 3e-09
gb|ADE76430.1| unknown [Picea sitchensis] 66 3e-09
>emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera]
Length = 1625
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/83 (46%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 IYDCDKLKRLPTE-LENLSTVTILFIWNCGGLESLTE-GLRNLTSLKGLGVDDCGSLKSL 174
IY C +L+ L L++L+++ L I NC L+SLT+ GL++LTSLK LG+++C L+SL
Sbjct: 1246 IYGCSRLQSLTEAGLQHLTSLEKLEIANCPMLQSLTKVGLQHLTSLKTLGINNCRMLQSL 1305
Query: 175 SESSLQHLTALQTLKLCSCPELE 243
+E LQHLT+L++L + +CP L+
Sbjct: 1306 TEVGLQHLTSLESLWINNCPMLQ 1328
Score = 62.0 bits (149), Expect = 5e-08
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 IYDCDKLKRLP-TELENLSTVTILFIWNCGGLESLTE-GLRNLTSLKGLGVDDCGSLKSL 174
I +C L+ L L++L+++ L+I NC L+SLT+ GL++LTSL+ L ++ C L+SL
Sbjct: 1296 INNCRMLQSLTEVGLQHLTSLESLWINNCPMLQSLTKVGLQHLTSLESLWINKCXMLQSL 1355
Query: 175 SESSLQHLTALQTLKLCSCPELEVM 249
++ LQHLT+L+TL++ C +L+ +
Sbjct: 1356 TKVGLQHLTSLKTLRIYDCSKLKYL 1380
>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223528186|gb|EEF30247.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1142
Score = 68.2 bits (165), Expect = 7e-10
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 16 KLKRLPTELENLSTVTILFIWNCGGLESLTE-GLRNLTSLKGLGVDDCGSLKSLSESSLQ 192
KLK LPT+L NLS++ LFI +C LES E GL+ L SLK L + +C SLSE LQ
Sbjct: 909 KLKGLPTDLANLSSLQSLFISDCYELESFPEQGLQGLCSLKHLQLRNCWKFSSLSEG-LQ 967
Query: 193 HLTALQTLKLCSCPEL 240
HLTAL+ L L CP+L
Sbjct: 968 HLTALEGLVLDGCPDL 983
>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
predicted protein [Populus trichocarpa]
Length = 475
Score = 68.2 bits (165), Expect = 7e-10
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 26/107 (24%)
Frame = +1
Query: 1 IYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE-------------------------SL 102
I+ C KL+ LP E L NL+++ +L IW CG L SL
Sbjct: 345 IWGCGKLESLPEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSL 404
Query: 103 TEGLRNLTSLKGLGVDDCGSLKSLSESSLQHLTALQTLKLCSCPELE 243
TEG+R+LT+L+ L + +C L SL E S+QHLT+LQ+L + CP LE
Sbjct: 405 TEGVRHLTALEDLELGNCPELNSLPE-SIQHLTSLQSLSIWKCPNLE 450
Score = 55.8 bits (133), Expect = 3e-06
Identities = 38/92 (41%), Positives = 46/92 (50%), Gaps = 25/92 (27%)
Frame = +1
Query: 40 LENLSTVTILFIWNCGGLESL-TEGLRNLTSLKGLGVDDCGSLKSLSESSL--------- 189
L+NLS + L IW CG LESL EGLRNL SL+ L + CG L L L
Sbjct: 334 LDNLSALKSLSIWGCGKLESLPEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRL 393
Query: 190 ---------------QHLTALQTLKLCSCPEL 240
+HLTAL+ L+L +CPEL
Sbjct: 394 KIQYCDKFTSLTEGVRHLTALEDLELGNCPEL 425
>ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222843439|gb|EEE80986.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1109
Score = 66.2 bits (160), Expect = 3e-09
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 12/83 (14%)
Frame = +1
Query: 19 LKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSES----- 183
LK L +L+NL + LF+ C LESL EGL+NL SL+ L ++ CG LKSL +
Sbjct: 940 LKSLSNQLDNLFALKRLFLIECDELESLPEGLQNLNSLESLHINSCGGLKSLPINGLCGL 999
Query: 184 -------SLQHLTALQTLKLCSC 231
S+QHLT+L++L +C C
Sbjct: 1000 HSLRRLHSIQHLTSLRSLTICDC 1022
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 13/93 (13%)
Frame = +1
Query: 1 IYDCDKLKRLPTELENLSTVTILFIWNCGGLESL-------------TEGLRNLTSLKGL 141
+ +CD+L+ LP L+NL+++ L I +CGGL+SL +++LTSL+ L
Sbjct: 958 LIECDELESLPEGLQNLNSLESLHINSCGGLKSLPINGLCGLHSLRRLHSIQHLTSLRSL 1017
Query: 142 GVDDCGSLKSLSESSLQHLTALQTLKLCSCPEL 240
+ DC + SL + + HL +L L++ CP+L
Sbjct: 1018 TICDCKGISSL-PNQIGHLMSLSHLRISDCPDL 1049
>gb|ADE76430.1| unknown [Picea sitchensis]
Length = 524
Score = 65.9 bits (159), Expect = 3e-09
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +1
Query: 7 DCDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSESS 186
DC L+RLP L NL+ + + + CG LE L E L NLT+L+ + + CGSL+ L E S
Sbjct: 53 DCRSLERLPESLSNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPE-S 111
Query: 187 LQHLTALQTLKLCSCPELE 243
L +LT LQ++ L C LE
Sbjct: 112 LGNLTNLQSMVLHKCGSLE 130
Score = 62.8 bits (151), Expect = 3e-08
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 1 IYDCDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSE 180
++ C L+RLP L NL+ + + + CG LE L E L NLT+L+ + +D SL+ L E
Sbjct: 99 LHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMDLDGLKSLERLPE 158
Query: 181 SSLQHLTALQTLKLCSCPELE 243
SL +LT LQ++ L SC LE
Sbjct: 159 -SLGNLTNLQSMVLHSCESLE 178
Score = 62.0 bits (149), Expect = 5e-08
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +1
Query: 10 CDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSESSL 189
C L+RLP L NL+ + + + +C LE L E L NLT+L+ + +DDC SL+ L E SL
Sbjct: 6 CRSLERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERLPE-SL 64
Query: 190 QHLTALQTLKLCSCPELE 243
+LT LQ++ L C LE
Sbjct: 65 SNLTNLQSMVLHKCGSLE 82
Score = 61.2 bits (147), Expect = 8e-08
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 1 IYDCDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSE 180
++ C L+RLP L NL+ + + + CG LE L E L NLT+L+ + + CGSL+ L E
Sbjct: 75 LHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPE 134
Query: 181 SSLQHLTALQTLKLCSCPELE 243
SL +LT LQ++ L LE
Sbjct: 135 -SLGNLTNLQSMDLDGLKSLE 154
Score = 59.3 bits (142), Expect = 3e-07
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 1 IYDCDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSE 180
+Y+C +L+RLP L NL + + + C LE L E L NL +L+ + + +C L+SL E
Sbjct: 263 LYECWRLERLPESLGNLMNLQSMMLHWCESLERLPESLGNLMNLQSMVLHECSKLESLPE 322
Query: 181 SSLQHLTALQTLKLCSCPELE 243
SL +LT LQ++ L C LE
Sbjct: 323 -SLGNLTNLQSMVLHECDHLE 342
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +1
Query: 10 CDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSESSL 189
C L+RLP L NL+ + + + +C LE L E L NLT+L+ + + CGSL+ L E SL
Sbjct: 30 CRSLERLPESLGNLTNLQSMKLDDCRSLERLPESLSNLTNLQSMVLHKCGSLERLPE-SL 88
Query: 190 QHLTALQTLKLCSCPELE 243
+LT LQ++ L C LE
Sbjct: 89 GNLTNLQSMVLHKCGSLE 106
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 10 CDKLKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSESSL 189
C+ L+RLP L NL + + + C LESL E L NLT+L+ + + +C L+ L E SL
Sbjct: 290 CESLERLPESLGNLMNLQSMVLHECSKLESLPESLGNLTNLQSMVLHECDHLERLPE-SL 348
Query: 190 QHLTALQTLKLCSCPEL 240
+LT LQ+++L C L
Sbjct: 349 GNLTNLQSMELIYCKRL 365
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/75 (42%), Positives = 48/75 (64%)
Frame = +1
Query: 19 LKRLPTELENLSTVTILFIWNCGGLESLTEGLRNLTSLKGLGVDDCGSLKSLSESSLQHL 198
L+RLP L NL+ + + + +C LE L E L NLT+L+ + +D C SL+ + E SL +L
Sbjct: 153 LERLPESLGNLTNLQSMVLHSCESLERLPECLGNLTNLQSMKLDYCESLERVPE-SLGNL 211
Query: 199 TALQTLKLCSCPELE 243
T LQ++ L +C LE
Sbjct: 212 TNLQSMVLHACGNLE 226