BLASTX nr result

ID: Coptis24_contig00008799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008799
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301661.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002335820.1| nbs-lrr resistance protein [Populus trichoca...    61   8e-08
ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trich...    59   4e-07
gb|ADE76430.1| unknown [Picea sitchensis]                              58   9e-07
ref|XP_002301660.1| cc-nbs-lrr resistance protein [Populus trich...    57   1e-06

>ref|XP_002301661.1| predicted protein [Populus trichocarpa] gi|222843387|gb|EEE80934.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +2

Query: 8   DEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTKLFILNCGGLESLTEGL 184
           DE+E+LPE  LRNLT L+VL I DC +L  LP   L  LS++ +  I  C    SLTEG+
Sbjct: 503 DELESLPEEGLRNLTSLEVLHIADCGRLNSLPMNGLCGLSSLRRFLIQGCNQFASLTEGV 562

Query: 185 RNLTSLK 205
           R+LT+L+
Sbjct: 563 RHLTALE 569


>ref|XP_002335820.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834992|gb|EEE73441.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 825

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   GFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTKLFILNCGGLESLTE 178
           G DE+E+LPE  LRNL  L+VLEI  C +L  LP   L  LS++ KL ++ C    SL+E
Sbjct: 699 GCDELESLPEEGLRNLNSLEVLEIIKCGRLNCLPMNGLCGLSSLRKLSVVGCDKFTSLSE 758

Query: 179 GLRNLTSLK 205
           G+R+LT L+
Sbjct: 759 GVRHLTVLE 767


>ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844683|gb|EEE82230.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1085

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2    GFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLP-TELENLSTVTKLFILNCGGLESLTE 178
            G +E+E++PE  L+NLT L++LEI  C +L  LP  EL +LS++  L I  C    SL+E
Sbjct: 906  GCNELESIPEEGLQNLTSLEILEILSCKRLNSLPMNELCSLSSLRHLSIHFCDQFASLSE 965

Query: 179  GLRNLTSLK 205
            G+R+LT+L+
Sbjct: 966  GVRHLTALE 974


>gb|ADE76430.1| unknown [Picea sitchensis]
          Length = 524

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +2

Query: 14  VETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTKLFILNCGGLESLTEGLRNL 193
           +E LPE+ L NLT LQ +++ DC  L+RLP  L NL+ +  + +  CG LE L E L NL
Sbjct: 33  LERLPES-LGNLTNLQSMKLDDCRSLERLPESLSNLTNLQSMVLHKCGSLERLPESLGNL 91

Query: 194 TSLK 205
           T+L+
Sbjct: 92  TNLQ 95



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/64 (45%), Positives = 41/64 (64%)
 Frame = +2

Query: 14  VETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTKLFILNCGGLESLTEGLRNL 193
           +E LPE+ L NLT LQ + ++ C  L+RLP  L NL+ +  + +  CG LE L E L NL
Sbjct: 57  LERLPES-LSNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNL 115

Query: 194 TSLK 205
           T+L+
Sbjct: 116 TNLQ 119



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/64 (45%), Positives = 41/64 (64%)
 Frame = +2

Query: 14  VETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTKLFILNCGGLESLTEGLRNL 193
           +E LPE+ L NLT LQ + ++ C  L+RLP  L NL+ +  + +  CG LE L E L NL
Sbjct: 81  LERLPES-LGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNL 139

Query: 194 TSLK 205
           T+L+
Sbjct: 140 TNLQ 143


>ref|XP_002301660.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222843386|gb|EEE80933.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1082

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = +2

Query: 11   EVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTKLFILNCGGLESLTEGLR 187
            ++E+LPE  LRNL  L+VLEI+ C +L  LP   L  LS++ KL + +C    SL+EG+R
Sbjct: 959  KLESLPEEGLRNLNSLEVLEIWSCGRLNCLPMNGLCGLSSLRKLHVGHCDKFTSLSEGVR 1018

Query: 188  NLTSLK 205
            +LT+L+
Sbjct: 1019 HLTALE 1024


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