BLASTX nr result

ID: Coptis24_contig00008791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008791
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Gl...   367   2e-99
ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis v...   367   2e-99
ref|XP_003600625.1| GTP binding protein [Medicago truncatula] gi...   366   4e-99
emb|CAA98166.1| RAB5A [Lotus japonicus] gi|388504250|gb|AFK40191...   366   4e-99
emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichori...   365   8e-99

>ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
          Length = 200

 Score =  367 bits (943), Expect = 2e-99
 Identities = 182/200 (91%), Positives = 195/200 (97%)
 Frame = -1

Query: 870 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 691
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 690 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 511
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SFTRAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120

Query: 510 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVFYEIARRLPRAQPSQNP 331
           AGNKADLE+KRKVTAEEAR+YAEENGLFFMETSAK A+NVND+FYEIA+RLPRAQP+QNP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLPRAQPAQNP 180

Query: 330 AGMVLVDRPADRSQAAKCCS 271
           AGMVLVDRPA+ ++AA CCS
Sbjct: 181 AGMVLVDRPAEGTRAASCCS 200


>ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
           gi|147795279|emb|CAN67253.1| hypothetical protein
           VITISV_014431 [Vitis vinifera]
          Length = 200

 Score =  367 bits (943), Expect = 2e-99
 Identities = 184/200 (92%), Positives = 191/200 (95%)
 Frame = -1

Query: 870 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 691
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 690 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 511
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESF RAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMAL 120

Query: 510 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVFYEIARRLPRAQPSQNP 331
           AGNKADLE+KRKVTAEEAR+YAEENGLFF ETSAK A NVND FYEIA+RLPRAQP+QNP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLPRAQPAQNP 180

Query: 330 AGMVLVDRPADRSQAAKCCS 271
           AGMVLVDRPA+ SQAA CCS
Sbjct: 181 AGMVLVDRPAESSQAASCCS 200


>ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
           gi|355489673|gb|AES70876.1| GTP binding protein
           [Medicago truncatula]
          Length = 200

 Score =  366 bits (940), Expect = 4e-99
 Identities = 182/200 (91%), Positives = 195/200 (97%)
 Frame = -1

Query: 870 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 691
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 690 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 511
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SF+RAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMAL 120

Query: 510 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVFYEIARRLPRAQPSQNP 331
           AGNK+DLE+KRKVTAEEAR+YAEENGLFFMETSAK+A NVNDVFYEIA+RLPRAQP+QNP
Sbjct: 121 AGNKSDLEDKRKVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNP 180

Query: 330 AGMVLVDRPADRSQAAKCCS 271
           AGMVLVDRPA+ S+AA CCS
Sbjct: 181 AGMVLVDRPAEGSRAASCCS 200


>emb|CAA98166.1| RAB5A [Lotus japonicus] gi|388504250|gb|AFK40191.1| unknown [Lotus
           japonicus]
          Length = 200

 Score =  366 bits (940), Expect = 4e-99
 Identities = 181/200 (90%), Positives = 195/200 (97%)
 Frame = -1

Query: 870 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 691
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 690 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 511
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SFTRAKKWVQELQKQGNP+MVMAF
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAF 120

Query: 510 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVFYEIARRLPRAQPSQNP 331
           AGNK+DLE+KRKVTA+EAR+YAEENGLFFMETSAK A NVNDVFYEIA+RLPRAQP+QNP
Sbjct: 121 AGNKSDLEDKRKVTADEARVYAEENGLFFMETSAKTAANVNDVFYEIAKRLPRAQPAQNP 180

Query: 330 AGMVLVDRPADRSQAAKCCS 271
           AGMVLVDRPA+ ++A+ CCS
Sbjct: 181 AGMVLVDRPAEGARASSCCS 200


>emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
          Length = 200

 Score =  365 bits (937), Expect = 8e-99
 Identities = 182/200 (91%), Positives = 193/200 (96%)
 Frame = -1

Query: 870 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 691
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 690 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 511
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS +SFTRAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120

Query: 510 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVFYEIARRLPRAQPSQNP 331
           AGNKADLE+KRKVTAEEAR+YAEENGLFFMETSAK A NVNDVF+EIA+RLPRAQP+QNP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP 180

Query: 330 AGMVLVDRPADRSQAAKCCS 271
           AGMVLVDRPA+ ++AA CCS
Sbjct: 181 AGMVLVDRPAEGARAASCCS 200


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