BLASTX nr result

ID: Coptis24_contig00008788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008788
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270993.1| PREDICTED: uncharacterized protein LOC100254...   167   3e-39
ref|XP_002270956.1| PREDICTED: uncharacterized protein LOC100259...   162   1e-37
ref|XP_002302567.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
ref|NP_001152568.1| thioesterase family protein [Zea mays] gi|19...   159   7e-37
ref|XP_002511811.1| acyl-CoA thioesterase, putative [Ricinus com...   154   3e-35

>ref|XP_002270993.1| PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera]
           gi|296089053|emb|CBI38756.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  167 bits (423), Expect = 3e-39
 Identities = 79/146 (54%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
 Frame = -2

Query: 730 FFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFLGSLHGGA 551
           FF+H+G++A+LP + ++ D Y+ +IRG+L+V++VERG +TC+  V P + N+ G LHGGA
Sbjct: 31  FFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVPAVANYYGGLHGGA 90

Query: 550 IAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFLVRYGRNVTVTSV 377
           +A + ELVS+AC ++VV  DKELFLGEL+ SY SAA    E+     +VR GRNVTV +V
Sbjct: 91  VAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDASVVRSGRNVTVIAV 150

Query: 376 EFRIKETKKLVYTARATFYNLPVANL 299
           EF++K+T KL+YT RATFYN+P+A L
Sbjct: 151 EFKMKKTSKLIYTGRATFYNMPIAKL 176


>ref|XP_002270956.1| PREDICTED: uncharacterized protein LOC100259154 [Vitis vinifera]
           gi|296089052|emb|CBI38755.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  162 bits (409), Expect = 1e-37
 Identities = 81/146 (55%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
 Frame = -2

Query: 730 FFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFLGSLHGGA 551
           FF+   L++ +     + D Y+ +I  +L+V+ VERG+ITC+++VKP ++N+ G LHGGA
Sbjct: 33  FFERQALASPVAADCLRKDFYSRLILSLLEVDSVERGRITCLVSVKPAVINYFGGLHGGA 92

Query: 550 IAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFLVRYGRNVTVTSV 377
           +AA+AELVS+AC ++VV  DKELFLGEL  SY SAA  N EL V   +VR GRNVTV +V
Sbjct: 93  VAAIAELVSIACARTVVAEDKELFLGELGMSYLSAAPKNAELTVDASVVRSGRNVTVIAV 152

Query: 376 EFRIKETKKLVYTARATFYNLPVANL 299
           EF+++ET +LVYTARATFYN+P+A L
Sbjct: 153 EFKMRETSQLVYTARATFYNMPMAKL 178


>ref|XP_002302567.1| predicted protein [Populus trichocarpa] gi|222844293|gb|EEE81840.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  160 bits (405), Expect = 3e-37
 Identities = 78/153 (50%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
 Frame = -2

Query: 751 WITPLNSFFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFL 572
           +++ +  FF  +G+ A+LP++S   D Y+D+IR +LKV+ V RG+++C+ +V P L N+ 
Sbjct: 22  YVSAVKGFFADVGIHASLPQNSFSKDFYSDLIRDLLKVDNVLRGRVSCIFSVSPALGNYF 81

Query: 571 GSLHGGAIAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFLVRYGR 398
             LHGGA+ A+AE VS+AC ++VV  DKELFLGEL+ SY SAA +N+ L V   + R GR
Sbjct: 82  NGLHGGAVGAIAERVSIACARTVVAGDKELFLGELSISYLSAATLNEVLVVEAAVARSGR 141

Query: 397 NVTVTSVEFRIKETKKLVYTARATFYNLPVANL 299
           N+TV + EFRIK+T+KLVYT+RAT Y++P A L
Sbjct: 142 NLTVVASEFRIKKTRKLVYTSRATIYHMPPAKL 174


>ref|NP_001152568.1| thioesterase family protein [Zea mays] gi|195657597|gb|ACG48266.1|
           thioesterase family protein [Zea mays]
           gi|414884502|tpg|DAA60516.1| TPA: thioesterase family
           protein [Zea mays]
          Length = 168

 Score =  159 bits (402), Expect = 7e-37
 Identities = 78/167 (46%), Positives = 115/167 (68%), Gaps = 7/167 (4%)
 Frame = -2

Query: 778 PPPNPTTPSWITPLNS------FFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGK 617
           PPP P  P  ++P  S      FF  LG+   LP S+++ DAYT ++R ++    V   +
Sbjct: 2   PPPPPVNPQRLSPAESRERTLYFFHGLGVDVPLPVSAERPDAYTSLVRAIVSSAAVTSSR 61

Query: 616 ITCVLTVKPPLLNFLGSLHGGAIAAVAELVSVACVKSVV-DKELFLGELATSYFSAAFVN 440
           ++C LTV P + N   +LHGGA+AAVAE V +AC ++   DKE+FLGEL+T+Y +AA +N
Sbjct: 62  VSCTLTVSPAVANQYNTLHGGAVAAVAEAVGMACARAAAGDKEMFLGELSTAYLAAARLN 121

Query: 439 DELEVGGFLVRYGRNVTVTSVEFRIKETKKLVYTARATFYNLPVANL 299
            E++V   ++R GR+V VT+++FR+K+TKKL YT+RATFY +PVA+L
Sbjct: 122 SEVDVEAQILRKGRSVVVTTIDFRLKDTKKLCYTSRATFYIMPVASL 168


>ref|XP_002511811.1| acyl-CoA thioesterase, putative [Ricinus communis]
           gi|223548991|gb|EEF50480.1| acyl-CoA thioesterase,
           putative [Ricinus communis]
          Length = 180

 Score =  154 bits (388), Expect = 3e-35
 Identities = 72/152 (47%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
 Frame = -2

Query: 748 ITPLNSFFKHLGLSANLPESSKKDDAYTDMIRGVLKVEKVERGKITCVLTVKPPLLNFLG 569
           +  ++ FF  +G+++ +P++ + +D Y++++  +LK + V+RG+I+C  +V P + N+ G
Sbjct: 29  VDKIHGFFTDVGVTSCIPKNKQSEDFYSNILSNLLKADHVQRGRISCSFSVLPFVANYFG 88

Query: 568 SLHGGAIAAVAELVSVACVKSVV--DKELFLGELATSYFSAAFVNDELEVGGFLVRYGRN 395
            LHGGA+AA+AE V++AC ++VV  DKE+FLGEL+ SY SAA  N+EL V   ++R G+N
Sbjct: 89  GLHGGALAAIAERVAIACARTVVAEDKEIFLGELSLSYLSAAPKNEELVVDSSVLRSGKN 148

Query: 394 VTVTSVEFRIKETKKLVYTARATFYNLPVANL 299
           +TV ++EF+IK+T KL +TARATFYN+PVA L
Sbjct: 149 LTVVAMEFKIKKTGKLAFTARATFYNMPVAKL 180


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