BLASTX nr result
ID: Coptis24_contig00008766
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008766 (769 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch... 202 7e-54 ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch... 202 7e-54 ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|2... 203 3e-53 gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein,... 199 1e-52 ref|XP_002325383.1| predicted protein [Populus trichocarpa] gi|2... 201 1e-52 >ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 1 [Vitis vinifera] gi|297737314|emb|CBI26515.3| unnamed protein product [Vitis vinifera] Length = 181 Score = 202 bits (513), Expect(2) = 7e-54 Identities = 101/112 (90%), Positives = 106/112 (94%) Frame = -1 Query: 580 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCGQVKVVLKSESEDD 401 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLL RAPKALNRWE CGQVKVVLK+ESE+D Sbjct: 69 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLRRAPKALNRWENCGQVKVVLKTESEED 128 Query: 400 LLVLQERAKSLNLPTHITIDAGRTQIAPNSRTVMALLGPADLVDDVTGALKL 245 +LVLQ RAKSL LP HITIDAGRTQIAPNSRTVMA+LGPAD+VDDVTG LKL Sbjct: 129 MLVLQGRAKSLQLPNHITIDAGRTQIAPNSRTVMAILGPADMVDDVTGGLKL 180 Score = 35.4 bits (80), Expect(2) = 7e-54 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 686 LVEVEKLAEILEDFKMVLVV 627 L E+EKLA+ILEDFKMVLVV Sbjct: 55 LDEIEKLADILEDFKMVLVV 74 >ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 2 [Vitis vinifera] Length = 173 Score = 202 bits (513), Expect(2) = 7e-54 Identities = 101/112 (90%), Positives = 106/112 (94%) Frame = -1 Query: 580 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCGQVKVVLKSESEDD 401 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLL RAPKALNRWE CGQVKVVLK+ESE+D Sbjct: 61 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLRRAPKALNRWENCGQVKVVLKTESEED 120 Query: 400 LLVLQERAKSLNLPTHITIDAGRTQIAPNSRTVMALLGPADLVDDVTGALKL 245 +LVLQ RAKSL LP HITIDAGRTQIAPNSRTVMA+LGPAD+VDDVTG LKL Sbjct: 121 MLVLQGRAKSLQLPNHITIDAGRTQIAPNSRTVMAILGPADMVDDVTGGLKL 172 Score = 35.4 bits (80), Expect(2) = 7e-54 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 686 LVEVEKLAEILEDFKMVLVV 627 L E+EKLA+ILEDFKMVLVV Sbjct: 47 LDEIEKLADILEDFKMVLVV 66 >ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|222839215|gb|EEE77566.1| predicted protein [Populus trichocarpa] Length = 186 Score = 203 bits (517), Expect(2) = 3e-53 Identities = 101/113 (89%), Positives = 107/113 (94%) Frame = -1 Query: 580 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCGQVKVVLKSESEDD 401 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMC Q KVV+K ESE+D Sbjct: 74 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCAQPKVVVKIESEED 133 Query: 400 LLVLQERAKSLNLPTHITIDAGRTQIAPNSRTVMALLGPADLVDDVTGALKLL 242 +LVLQ+RAKSLNLPTHITIDAGRTQIAPNSRTVMA+LGP +VDDVTG LKLL Sbjct: 134 MLVLQDRAKSLNLPTHITIDAGRTQIAPNSRTVMAILGPVGVVDDVTGGLKLL 186 Score = 31.6 bits (70), Expect(2) = 3e-53 Identities = 14/18 (77%), Positives = 17/18 (94%) Frame = -3 Query: 680 EVEKLAEILEDFKMVLVV 627 E +KLA+IL+DFKMVLVV Sbjct: 62 ETDKLADILDDFKMVLVV 79 >gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene latifolia] Length = 176 Score = 199 bits (505), Expect(2) = 1e-52 Identities = 98/113 (86%), Positives = 108/113 (95%) Frame = -1 Query: 580 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCGQVKVVLKSESEDD 401 KMVLVVRNDLKMGKGKIAAQCSHATLGL+KKL +RAPKALNRWEMCGQVKVV+K+ESE+D Sbjct: 64 KMVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQNRAPKALNRWEMCGQVKVVVKTESEED 123 Query: 400 LLVLQERAKSLNLPTHITIDAGRTQIAPNSRTVMALLGPADLVDDVTGALKLL 242 +L LQ RAKS +LPTHITIDAGRTQIAPNSRTVMA+LGPA++VDDVTG LKLL Sbjct: 124 MLALQGRAKSTHLPTHITIDAGRTQIAPNSRTVMAILGPAEMVDDVTGGLKLL 176 Score = 34.7 bits (78), Expect(2) = 1e-52 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = -3 Query: 683 VEVEKLAEILEDFKMVLVV 627 +E+EKLA+I+EDFKMVLVV Sbjct: 51 LEIEKLADIIEDFKMVLVV 69 >ref|XP_002325383.1| predicted protein [Populus trichocarpa] gi|222862258|gb|EEE99764.1| predicted protein [Populus trichocarpa] Length = 134 Score = 201 bits (510), Expect(2) = 1e-52 Identities = 100/113 (88%), Positives = 107/113 (94%) Frame = -1 Query: 580 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCGQVKVVLKSESEDD 401 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLL+RAPKALNRWEMC Q KVV+K ESE+D Sbjct: 22 KMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLNRAPKALNRWEMCAQPKVVVKIESEED 81 Query: 400 LLVLQERAKSLNLPTHITIDAGRTQIAPNSRTVMALLGPADLVDDVTGALKLL 242 +LVLQERAKSL LPTHITIDAGRTQIAPNSRTVMA+LGP ++VDDVTG LKLL Sbjct: 82 MLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 134 Score = 32.7 bits (73), Expect(2) = 1e-52 Identities = 14/18 (77%), Positives = 18/18 (100%) Frame = -3 Query: 680 EVEKLAEILEDFKMVLVV 627 E++KLA+IL+DFKMVLVV Sbjct: 10 EIDKLADILDDFKMVLVV 27