BLASTX nr result

ID: Coptis24_contig00008760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008760
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38967.3| unnamed protein product [Vitis vinifera]               69   3e-14
ref|XP_003632823.1| PREDICTED: receptor-like protein 12-like [Vi...    69   1e-12
ref|XP_002517679.1| serine/threonine-protein kinase bri1, putati...    63   2e-12
emb|CBI36375.3| unnamed protein product [Vitis vinifera]               69   2e-12
emb|CBI36499.3| unnamed protein product [Vitis vinifera]               74   2e-11

>emb|CBI38967.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score = 69.3 bits (168), Expect(2) = 3e-14
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = -2

Query: 159 DSSINIKDSISGFCELTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDNQL 1
           ++++N      GFC+L KLQ+LDLS N F+GILPPC NNLTSLR++D S NQL
Sbjct: 387 ENNLNGSLQNQGFCQLNKLQQLDLSYNLFQGILPPCFNNLTSLRLLDLSYNQL 439



 Score = 33.9 bits (76), Expect(2) = 3e-14
 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 401 LDLSYNML---DDFPDLRNMSNLKILNVTENDFXXXXXXXXXXXXXXXXXXXXGTNIKE- 234
           LDLS N L     F  L  +  L+ILN++ N F                      NI+  
Sbjct: 285 LDLSLNHLTGMQGFKSLPKLKKLEILNLSYNQFNKTNIKHLSGFTSLKTLVVSSNNIEGF 344

Query: 233 DSISNLRNLSMLKILDLSKNNFSGRILPS 147
               +  +LS L+ILDLS N+ SG I+PS
Sbjct: 345 FPFEDFASLSNLEILDLSYNSLSG-IIPS 372



 Score = 40.0 bits (92), Expect(2) = 4e-06
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = -3

Query: 407 EFLDLSYNMLDDF--PDLRNMSNLKILNVTENDFXXXXXXXXXXXXXXXXXXXXGTNIKE 234
           E LDLSYN L       +R MS+LK L + EN+                       N+ +
Sbjct: 357 EILDLSYNSLSGIIPSSIRLMSHLKSLYLVENNLNGSLQNQGFCQLNKLQQLDLSYNLFQ 416

Query: 233 DSISN-LRNLSMLKILDLSKNNFSGRILPSI 144
             +     NL+ L++LDLS N  SG + PS+
Sbjct: 417 GILPPCFNNLTSLRLLDLSYNQLSGNVSPSL 447



 Score = 35.4 bits (80), Expect(2) = 4e-06
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 114 LTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDN 7
           +  ++ L+LS N FEGILP  +  + SLR++D S N
Sbjct: 472 IPNMEYLNLSNNGFEGILPSSIAEMISLRVLDLSAN 507


>ref|XP_003632823.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1093

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -2

Query: 126 GFCELTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDN 7
           GFC+L KLQELDLS N F+GILPPCLNN TSLR++D S N
Sbjct: 749 GFCQLNKLQELDLSYNLFQGILPPCLNNFTSLRLLDLSSN 788



 Score = 30.0 bits (66), Expect(2) = 1e-12
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = -3

Query: 371 FPDLRNMSNLKILNVTENDFXXXXXXXXXXXXXXXXXXXXGTNIKEDSISN--LRNLSML 198
           + D  ++SNL++L+++ N F                    G N    S+ N    +LS L
Sbjct: 649 YADFASLSNLELLDLSNNSFSGSVPSSIRLMSSLKSLSLAG-NYLNGSLPNQDFASLSNL 707

Query: 197 KILDLSKNNFSGRILPS 147
           +ILDLS N+ SG I+PS
Sbjct: 708 EILDLSYNSLSG-IIPS 723



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 126 GFCELTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDN 7
           GFC+L KLQELDLS N F+GILPPCLNNLTSLR++D S N
Sbjct: 229 GFCQLNKLQELDLSYNLFQGILPPCLNNLTSLRLLDLSSN 268


>ref|XP_002517679.1| serine/threonine-protein kinase bri1, putative [Ricinus communis]
           gi|223543311|gb|EEF44843.1| serine/threonine-protein
           kinase bri1, putative [Ricinus communis]
          Length = 891

 Score = 62.8 bits (151), Expect(2) = 2e-12
 Identities = 28/42 (66%), Positives = 35/42 (83%)
 Frame = -2

Query: 126 GFCELTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDNQL 1
           GFCELT LQELDLS+N   G+LP CL++LTSLR++D S N+L
Sbjct: 151 GFCELTNLQELDLSQNNLSGVLPSCLSSLTSLRLLDLSFNRL 192



 Score = 34.3 bits (77), Expect(2) = 2e-12
 Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
 Frame = -3

Query: 401 LDLSYNMLDD-FPD-LRNMSNLKILNVTENDFXXXXXXXXXXXXXXXXXXXXGTNIKEDS 228
           LDLS N++   FPD L N+ NL+ L+++                         TN+   S
Sbjct: 63  LDLSLNLMQGAFPDELTNLKNLENLDLS-------------------------TNLLNSS 97

Query: 227 --ISNLRNLSMLKILDLSKNNFSGRILPSI 144
             I  L  L  L+ILDLS N   G I PSI
Sbjct: 98  LPIEGLATLKCLEILDLSNNRLIGHISPSI 127


>emb|CBI36375.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score = 69.3 bits (168), Expect(2) = 2e-12
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -2

Query: 126 GFCELTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDN 7
           GFC+L KLQELDLS N F+GILPPCLNNLTSLR++D S N
Sbjct: 79  GFCQLNKLQELDLSYNLFQGILPPCLNNLTSLRLLDLSSN 118



 Score = 27.3 bits (59), Expect(2) = 2e-12
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -3

Query: 212 NLSMLKILDLSKNNFSGRILPS 147
           +LS L++LDLS N+FSG I+PS
Sbjct: 33  SLSNLEVLDLSDNSFSG-IVPS 53


>emb|CBI36499.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = -2

Query: 159 DSSINIKDSISGFCELTKLQELDLSRNKFEGILPPCLNNLTSLRMVDFSDNQL 1
           ++ +N   SI G CEL KL+ELDLS N FEGILPPCLNNLTSLR++D S N L
Sbjct: 58  NNRLNSSLSIQGLCELKKLEELDLSLNSFEGILPPCLNNLTSLRLLDLSQNLL 110


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