BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008758
         (2204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   583   e-164
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   548   e-153
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   546   e-153
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   521   e-145
ref|XP_002513114.1| conserved hypothetical protein [Ricinus comm...   515   e-143

>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis vinifera]
            gi|296081305|emb|CBI17749.3| unnamed protein product
            [Vitis vinifera]
          Length = 553

 Score =  583 bits (1504), Expect = e-164
 Identities = 328/560 (58%), Positives = 389/560 (69%), Gaps = 6/560 (1%)
 Frame = -3

Query: 2031 ADNKLLLFGSFTEDELKSLQSPSPRKAVERKTLEKKDLQFGTVDFATVKSLSDL-NVRPG 1855
            +D+KLLLFGSFTEDE +SL       A   K   KK+LQFG+VDF T ++L+ + N    
Sbjct: 5    SDSKLLLFGSFTEDETRSLLRLPSGNA--EKPAAKKELQFGSVDFVTGRALASVGNELCR 62

Query: 1854 QVDSLEGSKSIQPSEVDRKGKELKNAAAQNDVLHVASEGVKENGSTHTSLDFLSLNKEGR 1675
            Q DS +G      S + +K  E K+    N +   A+   KENG  H   DF   +  G 
Sbjct: 63   QADSSKGPIDFCSSNLLKKDDETKSVDGVNKLSSEAAGTPKENGGVH---DFTHSSPLGN 119

Query: 1674 EHEGTIVNSASPVYKTKASPPELLVSSKPNGLESGRSIDNNVPTINHSLPSEIAA---NS 1504
                 +VN  +P    + +   L +S     L   +S++++V     S   ++     +S
Sbjct: 120  G----VVNELNP---DRFNLDSLCLSQNKEHLNQFQSLESHVVEEECSKERDLNGTIDDS 172

Query: 1503 SGVIDCKEDKQKALNGLAGAVKNLLPRGLINSGNLCFLNSTLQALLSCSPFVQLLQELRI 1324
            S  +  K++  KA NG A AVKNLLPRGLINSGNLCFLN+TLQALLSC+PF+QLLQELRI
Sbjct: 173  STFVPLKKEILKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELRI 232

Query: 1323 RNIPKIGYPTLYAFVEFISDFEMPADSSLKKNEMANLLTGRPFKPAMFESILKHFTPDVP 1144
            R+IPK+GYPTL AF EF+S+F+MP D SLKK ++  + TGRPF PAMFE +LK+FTPDVP
Sbjct: 233  RDIPKVGYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDVP 292

Query: 1143 NSISGRPRQEDAQEFLSFVMDQMHDE-XXXXXXXXXXXXSNVSLLSSSEDDGWEIVGPKN 967
            N ISGRPRQEDAQEFLSFVMDQMHDE                SL+SS+EDD WE VGPKN
Sbjct: 293  NKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVSSAEDDEWETVGPKN 352

Query: 966  KSAVTRTQSFVPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPDAVCTIEDAL 787
            KSAVTRTQSFVPSELS IFGGQLRSVVKARGNKASATVQPFLLLHLDI P+A+ TIEDAL
Sbjct: 353  KSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHLDILPEAIYTIEDAL 412

Query: 786  RLFSAPETLEGYRXXXXXXXXXXXXXXXXKIQTLSKVMILHLMRFGYG-SQGSTKLHKSV 610
            RLFSAPETLEGYR                KIQ LS++MILHLMRF Y  +QGSTKLHK V
Sbjct: 413  RLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFYYDENQGSTKLHKPV 472

Query: 609  WFPLELTLGRELLVSPSTESRKYELVATVTHHGREPSKGHYTADCFHADGQWLRYDDASV 430
             FPLEL LGRELLVSP+TE RKYELVAT+THHGR+PSKGHYT D  H  G WLR+DD++V
Sbjct: 473  TFPLELVLGRELLVSPTTEGRKYELVATITHHGRDPSKGHYTTDARHHSGHWLRFDDSAV 532

Query: 429  TAVGVNKVLHDQAYVLFYRQ 370
              V  +KVLH+  YVLFY+Q
Sbjct: 533  NVVSTSKVLHEHPYVLFYKQ 552


>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
            max]
          Length = 530

 Score =  548 bits (1412), Expect = e-153
 Identities = 320/559 (57%), Positives = 382/559 (68%), Gaps = 9/559 (1%)
 Frame = -3

Query: 2019 LLLFGSFTEDELKSLQSPSPRKAVERKTLEKKDLQFGTVDFATVKSLSDLNVRPGQVDSL 1840
            + +FGSFTEDE +SL S       E K +EK  LQFG+++  TV+S + LN       S 
Sbjct: 1    MFVFGSFTEDETRSLLSKQSFGKKE-KPVEKNQLQFGSLNSVTVESNNLLN-------SS 52

Query: 1839 EGSKSIQPSEVDRKGKELKNAAAQNDVLHVASEGVKENGS----THTSLDFLSLNKEGRE 1672
            + S +  PS+  RK   +K+A   +  +   S  VKENGS    +  S   +S+N+   +
Sbjct: 53   KASYNAPPSD-SRKCNGVKSAIDNSPEV---SGTVKENGSITNISPRSTSTISVNEVEEK 108

Query: 1671 HEG--TIVNSASPVYK-TKASPPELLVSSKPNGLESGRSIDNNVPTINHSLPSEIAANSS 1501
            +    T+     P+ K TK S       S  N   +G S D++ P +    P        
Sbjct: 109  NVNFFTLRCEDGPLNKFTKLSLDASEAESLKNVHTTG-SGDDSAPKLPDREP-------- 159

Query: 1500 GVIDCKEDKQKALNGLAGA-VKNLLPRGLINSGNLCFLNSTLQALLSCSPFVQLLQELRI 1324
                     QKA NG A   VK++LPRGLINSGNLCFLN+T+QALLSCSPFV LLQ+LR 
Sbjct: 160  ---------QKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRT 210

Query: 1323 RNIPKIGYPTLYAFVEFISDFEMPADSSLKKNEMANLLTGRPFKPAMFESILKHFTPDVP 1144
             N+PK+GYPTL AF EFI+ F+MP+ + LKK +     +GRPF+P MFE +LK+FTPDVP
Sbjct: 211  CNLPKVGYPTLTAFAEFITQFDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDVP 270

Query: 1143 NSISGRPRQEDAQEFLSFVMDQMHDEXXXXXXXXXXXXSN-VSLLSSSEDDGWEIVGPKN 967
            NSISGRPRQEDAQEFLSFVMDQMHDE             +  SL+SS EDD WE VGPKN
Sbjct: 271  NSISGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSSLVSSVEDDEWETVGPKN 330

Query: 966  KSAVTRTQSFVPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPDAVCTIEDAL 787
            KSAVTRTQSF+PSELS IFGGQLRS+V+A+GN+ASATVQP+LLLHLDI+PDAV TIEDAL
Sbjct: 331  KSAVTRTQSFLPSELSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDAL 390

Query: 786  RLFSAPETLEGYRXXXXXXXXXXXXXXXXKIQTLSKVMILHLMRFGYGSQGSTKLHKSVW 607
             LFSAPETLEGYR                +I TL K+MILHLMRFGYGSQGSTKLHK V 
Sbjct: 391  HLFSAPETLEGYRTSLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKPVH 450

Query: 606  FPLELTLGRELLVSPSTESRKYELVATVTHHGREPSKGHYTADCFHADGQWLRYDDASVT 427
            FPLEL LGR+LLVSPSTE RKYELVAT+THHG EPSKGHYTAD  + +G+WLR+DD SV 
Sbjct: 451  FPLELVLGRDLLVSPSTEGRKYELVATITHHGMEPSKGHYTADAQYPNGRWLRFDDQSVF 510

Query: 426  AVGVNKVLHDQAYVLFYRQ 370
            A+G NKVLHDQAYVLFYRQ
Sbjct: 511  AIGTNKVLHDQAYVLFYRQ 529


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
            max]
          Length = 532

 Score =  546 bits (1408), Expect = e-153
 Identities = 311/552 (56%), Positives = 375/552 (67%), Gaps = 2/552 (0%)
 Frame = -3

Query: 2019 LLLFGSFTEDELKSLQSPSPRKAVERKTLEKKDLQFGTVDFATVKSLSDLNVRPGQVDSL 1840
            + LFGSFTEDE +SL S       E K +EK  LQFG+++  TV+S + LN       S 
Sbjct: 1    MFLFGSFTEDETQSLLSKQSSGKKE-KPVEKNQLQFGSLNSVTVESNNLLN-------SS 52

Query: 1839 EGSKSIQPSEVDRKGKELKNAAAQNDVLHVASEGVKENGSTHTSLDFLSLNKEGREHEGT 1660
            +   +  PS+     ++     + +D     S  +KENGS  T++   S+         T
Sbjct: 53   KSPDNSPPSD----SQKCNGVKSVSDNSPEVSGTIKENGSI-TNISPRSIT--------T 99

Query: 1659 IVNSASPVYKTKASPPELLVSSKPNGLESGRSIDNNVPTINHSLPSEIAANSSGVIDCKE 1480
               S + V +  A+   L     P+   +  S+D +      +L      + S       
Sbjct: 100  STISVNEVEEKNANSFTLRGEDGPSNKFTKLSLDASEAESLKNLHKIGNGDDSAPKLSDR 159

Query: 1479 DKQKALNGLAGA-VKNLLPRGLINSGNLCFLNSTLQALLSCSPFVQLLQELRIRNIPKIG 1303
            + QKA NG A   VK++LPRGLINSGNLCFLN+T+QALLSCSPFV LLQ+LR RN+PK+G
Sbjct: 160  EPQKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTRNLPKVG 219

Query: 1302 YPTLYAFVEFISDFEMPADSSLKKNEMANLLTGRPFKPAMFESILKHFTPDVPNSISGRP 1123
            YPTL AF EFI+ F+MP+ + +KK +     +GRPF+P MFE +LK+FTPDVPNSISGRP
Sbjct: 220  YPTLTAFAEFIAQFDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDVPNSISGRP 279

Query: 1122 RQEDAQEFLSFVMDQMHDEXXXXXXXXXXXXSN-VSLLSSSEDDGWEIVGPKNKSAVTRT 946
            RQEDAQEFLSFVMDQMHDE             +  SL+SS EDD WE VGPKNKSAVTRT
Sbjct: 280  RQEDAQEFLSFVMDQMHDELLKLEGHSSSLNGSKSSLVSSVEDDEWETVGPKNKSAVTRT 339

Query: 945  QSFVPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPDAVCTIEDALRLFSAPE 766
            QSF+PS+LS IFGGQLRS+V+A+GN+ASATVQP+LLLHLDI+PDAV TIEDAL LFSAPE
Sbjct: 340  QSFLPSDLSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPE 399

Query: 765  TLEGYRXXXXXXXXXXXXXXXXKIQTLSKVMILHLMRFGYGSQGSTKLHKSVWFPLELTL 586
            TLEGYR                +I TL K+MILHLMRFGYGSQGS KLHK V FPLEL L
Sbjct: 400  TLEGYRTSLTAKAGVVTARKSVRIVTLPKIMILHLMRFGYGSQGSIKLHKPVHFPLELVL 459

Query: 585  GRELLVSPSTESRKYELVATVTHHGREPSKGHYTADCFHADGQWLRYDDASVTAVGVNKV 406
            GRELLVSPSTE RKYELVAT+THHG EPSKGHYTAD  + +G+WLR+DD SV A+G NKV
Sbjct: 460  GRELLVSPSTEGRKYELVATITHHGTEPSKGHYTADAQYPNGRWLRFDDQSVFAIGTNKV 519

Query: 405  LHDQAYVLFYRQ 370
            LHDQAYVLFYRQ
Sbjct: 520  LHDQAYVLFYRQ 531


>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 532

 Score =  521 bits (1341), Expect = e-145
 Identities = 310/556 (55%), Positives = 378/556 (67%), Gaps = 5/556 (0%)
 Frame = -3

Query: 2022 KLLLFGSFTEDELKSLQSPSPRKAVERKTLEKKDLQFGTVDFATVKSLSDLNVRPGQVDS 1843
            K+LLFGSFTEDE +SL+      A   K +EK  LQFG+++  TV+S S+L   P   +S
Sbjct: 5    KVLLFGSFTEDETRSLRVKKS-SAKNEKPVEKNQLQFGSLNSVTVES-SNLPNSPKATNS 62

Query: 1842 LEGSKSIQPSEVDRKGKELKNAAAQNDVLHVASEGVKENGS-THTSLDFLSLNK--EGRE 1672
                    P    +K K +         L   +E +KENG  T+ S+   S+    E +E
Sbjct: 63   A-------PLHDSQKFKGVNGVRVN---LPQVTETIKENGGITNFSIGPSSITSANEVKE 112

Query: 1671 HEGTIVNSASPVYKTKASPPELLVSSKPNGLESGRSIDNNVPTINHSLPSEIAANSSGVI 1492
            H   IV S +P+ +   +     +S   +  ES +++          L +    +SS  +
Sbjct: 113  H---IVCSVTPIVENGTANQFTNLSLDASEAESLKNV----------LKNGSGGDSSSKL 159

Query: 1491 DCKEDKQKALNGLAGA-VKNLLPRGLINSGNLCFLNSTLQALLSCSPFVQLLQELRIRNI 1315
              +++ +KA NG A   VK+L PRGLINSGNLCFL++T+QALL+CSPFVQLLQELR R I
Sbjct: 160  -FEQNLKKAPNGHAVMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTI 218

Query: 1314 PKIGYPTLYAFVEFISDFEMPADSSLKKNEMANLLTGRPFKPAMFESILKHFTPDVPNSI 1135
            PK+GYPTL AF EF++ F+MP+  +LKK +  +   GR F P MFE +LK+FTPDVPNSI
Sbjct: 219  PKVGYPTLKAFAEFVTQFDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSI 278

Query: 1134 SGRPRQEDAQEFLSFVMDQMHDEXXXXXXXXXXXXSNVS-LLSSSEDDGWEIVGPKNKSA 958
            SGRPRQEDAQEFLSFVMDQMHDE             + S L+SS EDD WE VGPKNKSA
Sbjct: 279  SGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSFLVSSVEDDEWETVGPKNKSA 338

Query: 957  VTRTQSFVPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPDAVCTIEDALRLF 778
            VTRTQSF+PSEL+ IFGGQL+S+V  +GN+ SAT QP+ L+HLDI PDAV TIEDAL LF
Sbjct: 339  VTRTQSFIPSELNGIFGGQLQSLVITKGNR-SATNQPYRLIHLDIHPDAVHTIEDALHLF 397

Query: 777  SAPETLEGYRXXXXXXXXXXXXXXXXKIQTLSKVMILHLMRFGYGSQGSTKLHKSVWFPL 598
            SAPETLEGYR                KI+TL KVMILHLMRFGYGSQGSTKL K V FPL
Sbjct: 398  SAPETLEGYR--ASVSGKAGTAKKSIKIKTLPKVMILHLMRFGYGSQGSTKLLKPVHFPL 455

Query: 597  ELTLGRELLVSPSTESRKYELVATVTHHGREPSKGHYTADCFHADGQWLRYDDASVTAVG 418
            EL LGR+LLVSPSTE RKYELVAT+THHGREPSKGHYTAD  + +G+WLR+DDASV A+ 
Sbjct: 456  ELVLGRDLLVSPSTEGRKYELVATITHHGREPSKGHYTADAQYPNGRWLRFDDASVFAIA 515

Query: 417  VNKVLHDQAYVLFYRQ 370
             NKVLHDQAYVLFY+Q
Sbjct: 516  TNKVLHDQAYVLFYKQ 531


>ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
            gi|223548125|gb|EEF49617.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 605

 Score =  515 bits (1327), Expect = e-143
 Identities = 310/557 (55%), Positives = 368/557 (66%), Gaps = 7/557 (1%)
 Frame = -3

Query: 2019 LLLFGSFTEDELKSLQSPSPRKAVERKTLEKKDLQFGTVDFATVKSLSDLNVRPG-QVDS 1843
            +L+FGSFTEDE KS Q+    +  ++K ++KK+LQFG+++FAT  +  D +     Q  S
Sbjct: 89   VLVFGSFTEDETKSWQANKSSEN-DKKPVQKKELQFGSLNFATGITFGDFSSESSRQPGS 147

Query: 1842 LEGSKSIQPSEVDRKGKELKNAA-AQNDVLHVASEGVKENGS----THTSLDFLSLNKEG 1678
              G  S Q +   +K K++K A   +  VL       K+NGS    TH+    L+   +G
Sbjct: 148  TNGKVSFQSTNPHKKEKDVKIAINPEPSVLG----SPKQNGSIADITHSVT--LANGVKG 201

Query: 1677 REHEGTIVNSASPVYKTKASPPELLVSSKPNGLESGRSIDNNVPTINHSLPSEIAANSSG 1498
             + E   + S   + + + SP  L  SS  + L+SG     ++  IN         N+S 
Sbjct: 202  LKTESLDLASLH-LSQNEDSPINLSQSSNFHVLDSGAVKGGDLDGIN---------NNSL 251

Query: 1497 VIDCKEDKQKALNGLAGAVKNLLPRGLINSGNLCFLNSTLQALLSCSPFVQLLQELRIRN 1318
            V    E+ +K  +    A                       ALLSCSPFVQLLQ LR RN
Sbjct: 252  VYVENENTRKPCDEPVAA-----------------------ALLSCSPFVQLLQNLRTRN 288

Query: 1317 IPKIGYPTLYAFVEFISDFEMPADSSLKKNEMANLLTGRPFKPAMFESILKHFTPDVPNS 1138
            IPK+G+PTL AF +F+S+F+MP+ SSLKK + A + TGRPF PAMFE +LK FTPDVPN 
Sbjct: 289  IPKVGFPTLTAFAQFVSEFDMPSSSSLKK-DTAIVETGRPFSPAMFEGVLKKFTPDVPNC 347

Query: 1137 ISGRPRQEDAQEFLSFVMDQMHDEXXXXXXXXXXXXS-NVSLLSSSEDDGWEIVGPKNKS 961
            ISGRPRQEDAQEFLSF+MDQMHDE                SL+SS+EDD WE VGPKNKS
Sbjct: 348  ISGRPRQEDAQEFLSFIMDQMHDELLKLEGQFACTNGAKSSLVSSTEDDEWETVGPKNKS 407

Query: 960  AVTRTQSFVPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPDAVCTIEDALRL 781
            AVTRTQSF+PSELS IFGGQLRSVVKA GNKASATVQPFLLLHLDI+P+AV TIEDAL L
Sbjct: 408  AVTRTQSFIPSELSDIFGGQLRSVVKATGNKASATVQPFLLLHLDIYPEAVRTIEDALHL 467

Query: 780  FSAPETLEGYRXXXXXXXXXXXXXXXXKIQTLSKVMILHLMRFGYGSQGSTKLHKSVWFP 601
            FSA E LEGYR                KIQTLSK+MILHLMRF YGSQGSTKLHK V FP
Sbjct: 468  FSALENLEGYRAPVTGKAGIVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVHFP 527

Query: 600  LELTLGRELLVSPSTESRKYELVATVTHHGREPSKGHYTADCFHADGQWLRYDDASVTAV 421
            LEL LGRELLVSPSTESRKYELVAT+THHGREPSKGHYTAD    +G WL +DDASVTA+
Sbjct: 528  LELVLGRELLVSPSTESRKYELVATITHHGREPSKGHYTADARCPNGHWLHFDDASVTAI 587

Query: 420  GVNKVLHDQAYVLFYRQ 370
            G +KVLHDQAYVLFYRQ
Sbjct: 588  GTSKVLHDQAYVLFYRQ 604