BLASTX nr result
ID: Coptis24_contig00008742
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008742 (575 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260... 113 2e-23 ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|2... 112 3e-23 ref|XP_003542444.1| PREDICTED: cyclin-D-binding Myb-like transcr... 110 2e-22 ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|2... 109 4e-22 ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcr... 105 5e-21 >ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260316 [Vitis vinifera] Length = 686 Score = 113 bits (283), Expect = 2e-23 Identities = 49/80 (61%), Positives = 65/80 (81%) Frame = +2 Query: 2 DIRLLDALLTMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGEHRNKSFADQVEVLS 181 D RLL+AL +D +E+VDWD+LLDHR G+LCRKRW M+ H+G ++NKSFA+QVE+LS Sbjct: 606 DYRLLNALFNLDACCMEDVDWDNLLDHRSGELCRKRWNQMIRHIGHYKNKSFAEQVELLS 665 Query: 182 KRYCGDVLEARAAYEERTPV 241 +RYC D+LEAR AY+ + PV Sbjct: 666 QRYCPDLLEAREAYDAKVPV 685 >ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|222869245|gb|EEF06376.1| predicted protein [Populus trichocarpa] Length = 538 Score = 112 bits (281), Expect = 3e-23 Identities = 53/80 (66%), Positives = 61/80 (76%) Frame = +2 Query: 2 DIRLLDALLTMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGEHRNKSFADQVEVLS 181 D RLL L +D +E+VDWD+LL+HR GDLCRKRW MV HLG+HRNKSFADQV+VL Sbjct: 458 DYRLLMELYDLDACCMEDVDWDNLLEHRSGDLCRKRWNQMVKHLGDHRNKSFADQVDVLI 517 Query: 182 KRYCGDVLEARAAYEERTPV 241 KRYC DVLEAR AY + V Sbjct: 518 KRYCPDVLEAREAYNSKPAV 537 >ref|XP_003542444.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like [Glycine max] Length = 326 Score = 110 bits (275), Expect = 2e-22 Identities = 47/77 (61%), Positives = 64/77 (83%) Frame = +2 Query: 2 DIRLLDALLTMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGEHRNKSFADQVEVLS 181 D RL++AL T+D +EEVDWD+LL+HRPGD+CRKRW MV ++GEH KSFA+QVE+L+ Sbjct: 246 DYRLVNALFTLDACCMEEVDWDNLLEHRPGDVCRKRWNQMVQYIGEHGGKSFAEQVEILA 305 Query: 182 KRYCGDVLEARAAYEER 232 KR+C D+LE R A++E+ Sbjct: 306 KRFCPDLLEVREAFDEK 322 >ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|222841208|gb|EEE78755.1| predicted protein [Populus trichocarpa] Length = 697 Score = 109 bits (272), Expect = 4e-22 Identities = 51/80 (63%), Positives = 60/80 (75%) Frame = +2 Query: 2 DIRLLDALLTMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGEHRNKSFADQVEVLS 181 D RLL L +D +E+VDWD+LL+HR G+LCRKRW MV HLG+HRNKSFADQV+VL Sbjct: 617 DYRLLMELYDLDACCMEDVDWDNLLEHRSGELCRKRWNQMVKHLGDHRNKSFADQVDVLI 676 Query: 182 KRYCGDVLEARAAYEERTPV 241 RYC DVLEAR AY + V Sbjct: 677 NRYCHDVLEAREAYNSKPAV 696 >ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like [Cucumis sativus] Length = 530 Score = 105 bits (262), Expect = 5e-21 Identities = 47/81 (58%), Positives = 64/81 (79%) Frame = +2 Query: 2 DIRLLDALLTMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGEHRNKSFADQVEVLS 181 D RL+DAL ++D S+E+V+WD LL+HR GD+CRKRW MV H+G++ NKSF++QVE+LS Sbjct: 450 DYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQMVKHIGDNGNKSFSEQVEILS 509 Query: 182 KRYCGDVLEARAAYEERTPVD 244 +RY DVL+AR AY+ VD Sbjct: 510 QRYSIDVLDAREAYDNAPVVD 530