BLASTX nr result

ID: Coptis24_contig00008738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008738
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    95   8e-18
gb|AFK48292.1| unknown [Lotus japonicus]                               84   1e-14
dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]           84   2e-14
ref|XP_002283678.1| PREDICTED: uncharacterized protein LOC100257...    83   4e-14
ref|XP_002511462.1| conserved hypothetical protein [Ricinus comm...    82   9e-14

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 46/84 (54%), Positives = 61/84 (72%)
 Frame = -2

Query: 483 MEKKNSYETSWTEQWDYDPNTPARKDRQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIE 304
           M   +S+ETSW +QWDY+P+ PA  D  +K  + D++ KY + V EG  KTK VASTGI+
Sbjct: 1   MSGNSSHETSWADQWDYNPD-PAVYDH-SKDSSSDSTAKYKQKVGEGLGKTKQVASTGIK 58

Query: 303 KVKEGATLGFNWIKEKYNKTNQKN 232
           KVKEG ++GF WIK+KY KT QK+
Sbjct: 59  KVKEGTSVGFRWIKDKYQKTTQKH 82


>gb|AFK48292.1| unknown [Lotus japonicus]
          Length = 84

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/80 (48%), Positives = 53/80 (66%)
 Frame = -2

Query: 471 NSYETSWTEQWDYDPNTPARKDRQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIEKVKE 292
           NSY TSW +QWD  P+ P      NK   G A+ KY + + EG  KTK VAS+GI+K+K+
Sbjct: 6   NSYGTSWADQWDDGPD-PIMVGSNNKSNGGGATTKYKEKLGEGLGKTKTVASSGIKKLKD 64

Query: 291 GATLGFNWIKEKYNKTNQKN 232
           G ++G +WIK KY+K  QK+
Sbjct: 65  GTSVGIHWIKTKYSKATQKH 84


>dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]
          Length = 90

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/79 (50%), Positives = 52/79 (65%)
 Frame = -2

Query: 471 NSYETSWTEQWDYDPNTPARKDRQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIEKVKE 292
           NS ETSW +QWD  P +   K   +KK   +A++K    V + F KTK+VASTG++KVK 
Sbjct: 11  NSQETSWADQWDPAPASXEYKXFNDKKSGTNATSKISSKVGDTFGKTKSVASTGVKKVKS 70

Query: 291 GATLGFNWIKEKYNKTNQK 235
           GAT GF WIK+K +K  QK
Sbjct: 71  GATAGFQWIKDKCHKPTQK 89


>ref|XP_002283678.1| PREDICTED: uncharacterized protein LOC100257032 [Vitis vinifera]
          Length = 74

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = -2

Query: 462 ETSWTEQWDYDPNTPARKDRQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIEKVKEGAT 283
           E +W +QWDY+P+  A K     K  G A++KYGK V EG  KTK  AS G++KVK G++
Sbjct: 2   ENTWADQWDYNPDPAADK---KGKSGGGAASKYGKKVGEGLGKTKVAASHGLKKVKAGSS 58

Query: 282 LGFNWIKEKYNKTNQK 235
           +G  WIKEKY++T  K
Sbjct: 59  VGLQWIKEKYHQTTHK 74


>ref|XP_002511462.1| conserved hypothetical protein [Ricinus communis]
           gi|223550577|gb|EEF52064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 39/80 (48%), Positives = 52/80 (65%)
 Frame = -2

Query: 471 NSYETSWTEQWDYDPNTPARKDRQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIEKVKE 292
           +S ETSW +QWD  P+ P    + +K  +  ++ KY + V EG  KTK VASTG +KVKE
Sbjct: 3   SSNETSWADQWDDGPD-PVHDYQNSKSNSTSSTAKYKQKVGEGLGKTKEVASTGFKKVKE 61

Query: 291 GATLGFNWIKEKYNKTNQKN 232
           G   GF+WIK+KY K  QK+
Sbjct: 62  GTVSGFHWIKDKYQKKTQKH 81


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