BLASTX nr result

ID: Coptis24_contig00008710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008710
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207...    99   1e-20
ref|NP_565311.1| uncharacterized protein [Arabidopsis thaliana] ...    93   1e-20
gb|AAM65381.1| unknown [Arabidopsis thaliana]                          91   5e-20
ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arab...    91   7e-20
ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|2...    97   9e-20

>ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]
           gi|449519980|ref|XP_004167012.1| PREDICTED:
           uncharacterized protein LOC101228588 [Cucumis sativus]
          Length = 176

 Score = 98.6 bits (244), Expect(2) = 1e-20
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = +2

Query: 584 DDFFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGT 763
           D F V+V E+N++LDT  MPM+LT V +ALFAK+LMMYDES+S+E IERKI+NAP GQGT
Sbjct: 48  DQFTVDVPESNSFLDTPSMPMILTAVGIALFAKLLMMYDESRSEELIERKIKNAPPGQGT 107

Query: 764 IRMLSRE 784
           +RMLSR+
Sbjct: 108 VRMLSRQ 114



 Score = 27.7 bits (60), Expect(2) = 1e-20
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 406 HQNHQGPTETLRKQVAELEKKRK 474
           HQ  +GP+E L+ ++AELEK RK
Sbjct: 19  HQR-EGPSEVLKGKIAELEKFRK 40


>ref|NP_565311.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197972|gb|AAD25844.2| expressed protein
           [Arabidopsis thaliana] gi|20198213|gb|AAM15465.1|
           expressed protein [Arabidopsis thaliana]
           gi|51971539|dbj|BAD44434.1| unknown protein [Arabidopsis
           thaliana] gi|51971797|dbj|BAD44563.1| unknown protein
           [Arabidopsis thaliana] gi|107738176|gb|ABF83655.1|
           At2g04340 [Arabidopsis thaliana]
           gi|330250727|gb|AEC05821.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 173

 Score = 92.8 bits (229), Expect(2) = 1e-20
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +2

Query: 584 DDFFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGT 763
           + F VEV E+ +YLDT  MPM L  V +ALFAKVLMM D+SKSQE IERKI+NAP GQGT
Sbjct: 47  NQFLVEVPESRSYLDTATMPMFLAVVGIALFAKVLMMIDDSKSQEMIERKIKNAPQGQGT 106

Query: 764 IRMLSRE 784
           +RM+ RE
Sbjct: 107 VRMIDRE 113



 Score = 33.1 bits (74), Expect(2) = 1e-20
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +1

Query: 403 HHQNHQGPTETLRKQVAELEKKRKK 477
           H  ++  PTETLRK++A+L+K +K+
Sbjct: 17  HSPSNDAPTETLRKKIADLQKSKKR 41


>gb|AAM65381.1| unknown [Arabidopsis thaliana]
          Length = 172

 Score = 90.9 bits (224), Expect(2) = 5e-20
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = +2

Query: 584 DDFFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGT 763
           + F VEV E+ +YLDT  MPM L  V +ALFA VLMM D+SKSQE IERKI+NAP GQGT
Sbjct: 46  NQFLVEVPESRSYLDTATMPMFLAVVGIALFANVLMMIDDSKSQEMIERKIKNAPQGQGT 105

Query: 764 IRMLSRE 784
           +RM+ RE
Sbjct: 106 VRMIERE 112



 Score = 33.1 bits (74), Expect(2) = 5e-20
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +1

Query: 403 HHQNHQGPTETLRKQVAELEKKRKK 477
           H  ++  PTETLRK++A+L+K +K+
Sbjct: 16  HSPSNDAPTETLRKKIADLQKSKKR 40


>ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arabidopsis lyrata subsp.
           lyrata] gi|297329475|gb|EFH59894.1| hypothetical protein
           ARALYDRAFT_899238 [Arabidopsis lyrata subsp. lyrata]
          Length = 173

 Score = 91.3 bits (225), Expect(2) = 7e-20
 Identities = 44/67 (65%), Positives = 53/67 (79%)
 Frame = +2

Query: 584 DDFFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGT 763
           + F VEV E+ +YLDT  MPM L  V +ALFAKVLMM D+SKSQE IERKI+NAP GQGT
Sbjct: 47  NQFLVEVPESRSYLDTATMPMFLAVVGIALFAKVLMMIDDSKSQEMIERKIKNAPPGQGT 106

Query: 764 IRMLSRE 784
           +R++ RE
Sbjct: 107 VRIIERE 113



 Score = 32.3 bits (72), Expect(2) = 7e-20
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 403 HHQNHQGPTETLRKQVAELEKKRKK 477
           H  +   PTETLRK++A+L+K +K+
Sbjct: 17  HSPSSDAPTETLRKKIADLQKSKKR 41


>ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|222838735|gb|EEE77100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 96.7 bits (239), Expect(2) = 9e-20
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = +2

Query: 584 DDFFVEVKENNAYLDTMKMPMVLTFVAVALFAKVLMMYDESKSQETIERKIQNAPAGQGT 763
           DD FV+V E+ ++LDT  MPM+LT V  ALFAK+LMMYD+S SQE IERKI+NAP GQGT
Sbjct: 54  DDIFVQVPESLSFLDTATMPMILTVVGTALFAKLLMMYDDSHSQEMIERKIKNAPVGQGT 113

Query: 764 IRMLSRE 784
           +RML+RE
Sbjct: 114 VRMLTRE 120



 Score = 26.6 bits (57), Expect(2) = 9e-20
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 412 NHQGPTETLRKQVAELEKKRK 474
           +  G TETL+++V ELEK R+
Sbjct: 25  SRDGATETLKRRVTELEKIRR 45


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