BLASTX nr result

ID: Coptis24_contig00008704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008704
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261...    91   1e-15
emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]    89   4e-15
ref|XP_003529611.1| PREDICTED: uncharacterized protein LOC100804...    74   8e-11
ref|XP_003546131.1| PREDICTED: uncharacterized protein LOC100786...    72   3e-10
ref|XP_002517157.1| chloroplast-targeted copper chaperone, putat...    72   5e-10

>ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261454 [Vitis vinifera]
          Length = 491

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 54/110 (49%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
 Frame = +1

Query: 904  NIPAVQGLPAPAMNASTGGG------------GYFQGAGPEVMAGXXXXXXXXXXXXXXX 1047
            N+PAVQGLPA A+NA   GG            GYFQGAGPEVMAG               
Sbjct: 383  NMPAVQGLPAGAINAGGAGGGAPPGYGGGVPPGYFQGAGPEVMAGNPYYQQQLAAMMMNQ 442

Query: 1048 XRANGNERFQPMMYARXXXXXXXXXXXXXXXXXXXXHFFSDENTNSCNVM 1197
             RA+GNERFQPMMYAR                    HFFSDENT+SCNVM
Sbjct: 443  QRAHGNERFQPMMYAR-PPPAVNYLPPYPPQPDPYTHFFSDENTSSCNVM 491


>emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]
          Length = 136

 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 55/110 (50%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
 Frame = +1

Query: 904  NIPAVQGLPAPAMNAST---------GGG---GYFQGAGPEVMAGXXXXXXXXXXXXXXX 1047
            N+PAVQGLPA A+NA           GGG   GYFQGAGPEVMAG               
Sbjct: 28   NMPAVQGLPAGAINAGGVSGGAPPGYGGGVPPGYFQGAGPEVMAGNPYYQQQLAAMMMNQ 87

Query: 1048 XRANGNERFQPMMYARXXXXXXXXXXXXXXXXXXXXHFFSDENTNSCNVM 1197
             RA+GNERFQPMMYAR                    HFFSDENT+SCNVM
Sbjct: 88   QRAHGNERFQPMMYAR-PPPAVNYLPPYPPQPDPYTHFFSDENTSSCNVM 136


>ref|XP_003529611.1| PREDICTED: uncharacterized protein LOC100804757 [Glycine max]
          Length = 490

 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 48/111 (43%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
 Frame = +1

Query: 904  NIPAVQGLPAPAMNASTGGGGYFQGAGPEVMAG------------XXXXXXXXXXXXXXX 1047
            NIPAVQGLPA  +N    GGG+FQGAGP+ M G                           
Sbjct: 384  NIPAVQGLPAGPVN----GGGFFQGAGPDAMPGNPFQQQQQQQQQQQLQQQYMAAAMMNQ 439

Query: 1048 XRANGNERFQPMMYAR-XXXXXXXXXXXXXXXXXXXXHFFSDENTNSCNVM 1197
             RA GN+RFQPMMYAR                     HFFSDENT+SCNVM
Sbjct: 440  QRAMGNDRFQPMMYARPPPAVNYMYPPYPYPPPDPYTHFFSDENTSSCNVM 490


>ref|XP_003546131.1| PREDICTED: uncharacterized protein LOC100786567 [Glycine max]
          Length = 492

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 47/106 (44%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
 Frame = +1

Query: 904  NIPAVQGLPAPA-MNASTGGGGYFQGAG--PEVM-AGXXXXXXXXXXXXXXXXRANGNER 1071
            NIPAVQGLPA A MN    GGGYFQG G  P++M  G                RA GN+R
Sbjct: 387  NIPAVQGLPAAAAMNGGAAGGGYFQGGGGGPDMMPGGNSYQQQQYMAAMMNQQRAMGNDR 446

Query: 1072 FQPMMYAR----XXXXXXXXXXXXXXXXXXXXHFFSDENTNSCNVM 1197
            FQPMMYAR                        ++FSDENT+SC+VM
Sbjct: 447  FQPMMYARPPMAVNYMYPPPYSYPPPPHEPYSNYFSDENTSSCSVM 492


>ref|XP_002517157.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
            gi|223543792|gb|EEF45320.1| chloroplast-targeted copper
            chaperone, putative [Ricinus communis]
          Length = 526

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 51/119 (42%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
 Frame = +1

Query: 904  NIPAVQGLPAPAM----NASTGGGGYFQGAGPEVMAGXXXXXXXXXXXXXXXX----RAN 1059
            NIPAVQGLPA A         GG GYFQGAGP++M G                    RA 
Sbjct: 408  NIPAVQGLPAGAAMGGGGPGAGGNGYFQGAGPDLMPGNPYHHQQQQQQYLQAIMNQQRAM 467

Query: 1060 GNERFQPMMYAR-------------XXXXXXXXXXXXXXXXXXXXHFFSDENTNSCNVM 1197
            GNERFQPMMYAR                                 +FFSDENT+SCNVM
Sbjct: 468  GNERFQPMMYARPPPAVNYMPPYPYSYAPPPHQGSDPYXXSDPYTNFFSDENTSSCNVM 526


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