BLASTX nr result

ID: Coptis24_contig00008699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008699
         (1663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282031.1| PREDICTED: ALBINO3-like protein 1, chloropla...   421   e-115
ref|XP_003552798.1| PREDICTED: ALBINO3-like protein 1, chloropla...   419   e-114
ref|XP_003538580.1| PREDICTED: ALBINO3-like protein 1, chloropla...   417   e-114
ref|XP_004159588.1| PREDICTED: ALBINO3-like protein 1, chloropla...   412   e-112
ref|XP_002515035.1| conserved hypothetical protein [Ricinus comm...   410   e-112

>ref|XP_002282031.1| PREDICTED: ALBINO3-like protein 1, chloroplastic [Vitis vinifera]
           gi|296081405|emb|CBI16838.3| unnamed protein product
           [Vitis vinifera]
          Length = 539

 Score =  421 bits (1082), Expect = e-115
 Identities = 207/282 (73%), Positives = 239/282 (84%)
 Frame = +2

Query: 2   LTVLVKAATFPLTKKQVESAMAMKSLQPQVNAIQKQFAGDQERIQLETARLYKIAGVNPL 181
           LTVLVKAATFPLTKKQVESAMAM+SLQPQ+ AIQ+++AGDQERIQLETARLYK+AG+NPL
Sbjct: 126 LTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPL 185

Query: 182 AGCLPTIATIPVWVGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAKQNGSGISWIFPF 361
           AGCLPT+ATIPVW+GLYRALSNVA+EGLLTEGFFWIPSL+GPTTIAA+QNGSGISW+FPF
Sbjct: 186 AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGSGISWLFPF 245

Query: 362 VDGHPPLGWXXXXXXXXXXXXXXXSQYISVHIMQSSQNNDPNLKASQALSKFLPLMIGYF 541
           VDGHPPLGW               SQYISV IMQSSQ+NDP+LK SQAL+KFLPLMIGYF
Sbjct: 246 VDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQSNDPSLKTSQALTKFLPLMIGYF 305

Query: 542 ALSVPSGLSLYWFTNNILSTTQQIWLQKLGGAKSSIREFSDKSVKEVQKKLKGSVDNENS 721
           ALSVPSGLSLYWFTNNILST QQ+WLQKLGGA+  +++FSD   KE   +++  V   NS
Sbjct: 306 ALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAQIPVKQFSDDIEKEELSQIQKPVFEINS 365

Query: 722 TNIMESRKEEKPSGGMRPGDRFKQIKEQEARKKEQMDEEKRK 847
           T     + E+  S G+RPG+RFKQIKEQEAR+++Q +EEK K
Sbjct: 366 TKKEPKQTEKLTSEGLRPGERFKQIKEQEARRRQQREEEKTK 407


>ref|XP_003552798.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max]
          Length = 534

 Score =  419 bits (1076), Expect = e-114
 Identities = 217/358 (60%), Positives = 263/358 (73%), Gaps = 2/358 (0%)
 Frame = +2

Query: 2    LTVLVKAATFPLTKKQVESAMAMKSLQPQVNAIQKQFAGDQERIQLETARLYKIAGVNPL 181
            LTVLVKAATFPLTKKQVESA+AM++LQPQV AIQ+Q+AGDQERIQLETARLYK+A +NPL
Sbjct: 140  LTVLVKAATFPLTKKQVESALAMRTLQPQVKAIQQQYAGDQERIQLETARLYKLANINPL 199

Query: 182  AGCLPTIATIPVWVGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAKQNGSGISWIFPF 361
            AGCLPT+ATIPVW+GLYRALSNVA+EGLLTEGFFWIPSLAGPTT+AA+QNGSGISWIFPF
Sbjct: 200  AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWIFPF 259

Query: 362  VDGHPPLGWXXXXXXXXXXXXXXXSQYISVHIMQSSQNNDPNLKASQALSKFLPLMIGYF 541
            VDGHPPLGW               SQYISV IMQSSQ NDPN+K+SQAL+K LPLMIGYF
Sbjct: 260  VDGHPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQALTKVLPLMIGYF 319

Query: 542  ALSVPSGLSLYWFTNNILSTTQQIWLQKLGGAKSSIREFSDKSVKEVQKKLKGSVDNENS 721
            ALSVPSGLSLYW TNNILST QQ+WLQKLGGAK+ +R+  D  +K    +++ S+   NS
Sbjct: 320  ALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSISKLNS 379

Query: 722  TNIMESRKEEKPSGGMRPGDRFKQIKEQEARKKEQMDEEKRKLAAITTESADKKLESVKT 901
            T   E+R+ EK S G +PG+RFK IKEQEAR++++ +EE++ L     E+A +K +  +T
Sbjct: 380  TKAEEARQSEKTSEGPQPGERFKLIKEQEARRRQRKEEERKAL-----EAAARKAKIDET 434

Query: 902  XXXXXXXXXXXXXXXIVKSP--TAASEPPNQVPLVNGEHSFLSSNEDQKEMSLPRAEN 1069
                           +V+     A+   P+   +VNG         +Q   S+   EN
Sbjct: 435  FEKTVEEGNQTGGDLVVEKSRFVASDTDPSISGVVNGNPLSKDLEGNQNSTSISETEN 492


>ref|XP_003538580.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Glycine max]
          Length = 543

 Score =  417 bits (1071), Expect = e-114
 Identities = 218/358 (60%), Positives = 264/358 (73%), Gaps = 2/358 (0%)
 Frame = +2

Query: 2    LTVLVKAATFPLTKKQVESAMAMKSLQPQVNAIQKQFAGDQERIQLETARLYKIAGVNPL 181
            LTVLVKAATFPLTKKQVES++AM++LQPQV AIQ+++AGDQERIQLETARLYK+A +NPL
Sbjct: 146  LTVLVKAATFPLTKKQVESSLAMRTLQPQVKAIQQRYAGDQERIQLETARLYKLANINPL 205

Query: 182  AGCLPTIATIPVWVGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAKQNGSGISWIFPF 361
            AGCLPT+ATIPVW+GLYRALS+VA+EGLLTEGFFWIPSLAGPTT+AA+QNGSGISW+FPF
Sbjct: 206  AGCLPTLATIPVWIGLYRALSSVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPF 265

Query: 362  VDGHPPLGWXXXXXXXXXXXXXXXSQYISVHIMQSSQNNDPNLKASQALSKFLPLMIGYF 541
            VDGHPPLGW               SQYISV IMQSSQ NDPN+K+SQAL+ FLPLMIGYF
Sbjct: 266  VDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQALTNFLPLMIGYF 325

Query: 542  ALSVPSGLSLYWFTNNILSTTQQIWLQKLGGAKSSIREFSDKSVKEVQKKLKGSVDNENS 721
            ALSVPSGLSLYW TNNILST QQ+WLQKLGGAK+ +R+  D  +K    +++ S+   NS
Sbjct: 326  ALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSMSKLNS 385

Query: 722  TNIMESRKEEKPSGGMRPGDRFKQIKEQEARKKEQMDEEKRKLAAITTESADKKLESVKT 901
            T   E+R  EK S G +PG+RFK IKEQEAR+K+Q +EE+ K  A+   + + K++  KT
Sbjct: 386  TTAEEARLSEKTSEGPQPGERFKLIKEQEARRKQQREEEEEKRKALEAAARETKVD--KT 443

Query: 902  XXXXXXXXXXXXXXXIV-KSPTAASE-PPNQVPLVNGEHSFLSSNEDQKEMSLPRAEN 1069
                           +V KS + AS+  P+   +VNG         +Q   S    EN
Sbjct: 444  LEETVEVENQTGGDLVVEKSRSLASDTDPSISGVVNGNPLSKDLEGNQNSTSTSETEN 501


>ref|XP_004159588.1| PREDICTED: ALBINO3-like protein 1, chloroplastic-like [Cucumis
           sativus]
          Length = 477

 Score =  412 bits (1058), Expect = e-112
 Identities = 202/286 (70%), Positives = 243/286 (84%), Gaps = 4/286 (1%)
 Frame = +2

Query: 2   LTVLVKAATFPLTKKQVESAMAMKSLQPQVNAIQKQFAGDQERIQLETARLYKIAGVNPL 181
           LTVLVKAATFPLTKKQVESAMAM+SLQPQV A+Q+++AGDQERIQLETARLYK+AG+NPL
Sbjct: 138 LTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQLETARLYKLAGINPL 197

Query: 182 AGCLPTIATIPVWVGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAKQNGSGISWIFPF 361
           AGCLPT+ATIPVW+GLYRALSNVANEGLLTEGFFWIPSLAGPTTIA++QNGSGISW+FPF
Sbjct: 198 AGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPF 257

Query: 362 VDGHPPLGWXXXXXXXXXXXXXXXSQYISVHIMQSSQNNDPNLKASQALSKFLPLMIGYF 541
           VDGHPPLGW               SQYISV IMQSSQNNDP++K+SQA+++FLPLMIGYF
Sbjct: 258 VDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPSMKSSQAITQFLPLMIGYF 317

Query: 542 ALSVPSGLSLYWFTNNILSTTQQIWLQKLGGAKSSIREFSDKSVKEVQKKLKGSVDNENS 721
           ALSVPSGLSLYW TNNILST QQ WLQK GGAK+  ++F D+ +K+ +K+++   +    
Sbjct: 318 ALSVPSGLSLYWLTNNILSTAQQAWLQKAGGAKTLDKQFIDEIMKQEEKQVRVQSEAPKL 377

Query: 722 TNIMES---RKEEKPSG-GMRPGDRFKQIKEQEARKKEQMDEEKRK 847
            +I  S   R+EEKP+  G++PG+RFK++KEQEAR ++Q +EE+RK
Sbjct: 378 NSISSSTVARQEEKPTAEGLKPGERFKRLKEQEARLRQQREEEERK 423


>ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis]
            gi|223546086|gb|EEF47589.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 499

 Score =  410 bits (1053), Expect = e-112
 Identities = 206/304 (67%), Positives = 249/304 (81%), Gaps = 7/304 (2%)
 Frame = +2

Query: 2    LTVLVKAATFPLTKKQVESAMAMKSLQPQVNAIQKQFAGDQERIQLETARLYKIAGVNPL 181
            LTVLVKAATFPLTKKQVESAMAM+SLQPQ+ AIQ+Q+AG+QE+IQLETARLYK+AG+NP 
Sbjct: 142  LTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQQYAGNQEKIQLETARLYKLAGINPF 201

Query: 182  AGCLPTIATIPVWVGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAKQNGSGISWIFPF 361
            AGCLPT+ATIPVW+GLYRALSNVA+EGLLTEGFFWIPSLAGPTT+AA+QNGSGISW+FPF
Sbjct: 202  AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPF 261

Query: 362  VDGHPPLGWXXXXXXXXXXXXXXXSQYISVHIMQSSQNNDPNLKASQALSKFLPLMIGYF 541
            VDGHPPLGW               SQYISV IMQSSQNNDPN+K+SQA+++ LPLMIGYF
Sbjct: 262  VDGHPPLGWYDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQAITQLLPLMIGYF 321

Query: 542  ALSVPSGLSLYWFTNNILSTTQQIWLQKLGGAKSSIREFS----DKSVKEVQKKLKGSVD 709
            ALSVPSGLSLYW TNNILST QQ+WLQKLGGAK+ + +       KSV ++Q  ++ SV 
Sbjct: 322  ALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVSQEDHLRVQKSVDQLQ--VQKSVS 379

Query: 710  NENSTNIMESRKEEKPSGGMRPGDRFKQIKEQEARKKEQMDEEKRK---LAAITTESADK 880
              +ST     + E+    G+RPG+RFKQ+KEQEA++K+Q +EEKRK    AAI++++A+ 
Sbjct: 380  ELDSTKAKAIQVEKLTPEGLRPGERFKQLKEQEAKRKQQREEEKRKAEEAAAISSQTANG 439

Query: 881  KLES 892
             L +
Sbjct: 440  SLHA 443


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