BLASTX nr result
ID: Coptis24_contig00008696
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008696 (271 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera] 58 9e-07 ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 ref|XP_002311048.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 ref|XP_003633209.1| PREDICTED: metalloendoproteinase 1-like [Vit... 56 3e-06 >ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|222850872|gb|EEE88419.1| predicted protein [Populus trichocarpa] Length = 309 Score = 58.5 bits (140), Expect = 5e-07 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Frame = +2 Query: 56 LLVIMFMLPSLLFSKPNGRSFD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHY--XXXX 226 +L+++ M + SKP+G F I+HLEGC K VKGL+++K+YLE+FGYL Y Sbjct: 12 ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHKNGSVKGLHELKRYLEKFGYLKYGHQGKK 71 Query: 227 XXXXXXXXVFDDLLE 271 FDDLLE Sbjct: 72 GHNHANDDEFDDLLE 86 >emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera] Length = 319 Score = 57.8 bits (138), Expect = 9e-07 Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Frame = +2 Query: 35 LGLQAFLLLVIMFMLPSLLFSKPNGRS---FD-IQHLEGCQKGQKVKGLNQVKQYLERFG 202 L +F+LL ++F+ P + S NG + F+ I+ LEGCQKG KVK ++++K+YL++FG Sbjct: 5 LSTMSFILL-LLFLFP--ITSHANGENPSPFEFIKDLEGCQKGHKVKDIHKLKKYLQQFG 61 Query: 203 YLHYXXXXXXXXXXXXVFDDLLE 271 YL Y FDDLLE Sbjct: 62 YLSYSHSEHQTHADNDDFDDLLE 84 >ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|222850870|gb|EEE88417.1| predicted protein [Populus trichocarpa] Length = 309 Score = 57.4 bits (137), Expect = 1e-06 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Frame = +2 Query: 56 LLVIMFMLPSLLFSKPNGRSFD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHY--XXXX 226 +L+++ M + SKP+G F I+HLEGC + VKGL+++K+YLE+FGYL Y Sbjct: 12 ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHRNVSVKGLHELKRYLEKFGYLKYGHQGKK 71 Query: 227 XXXXXXXXVFDDLLE 271 FDDLLE Sbjct: 72 GHNHANDDEFDDLLE 86 >ref|XP_002311048.1| predicted protein [Populus trichocarpa] gi|222850868|gb|EEE88415.1| predicted protein [Populus trichocarpa] Length = 259 Score = 57.4 bits (137), Expect = 1e-06 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Frame = +2 Query: 56 LLVIMFMLPSLLFSKPNGRSFD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHY--XXXX 226 +L+++ M + SKP+G F I+HLEGC + VKGL+++K+YLE+FGYL Y Sbjct: 12 ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHRNVSVKGLHELKRYLEKFGYLKYGHQGKK 71 Query: 227 XXXXXXXXVFDDLLE 271 FDDLLE Sbjct: 72 GHNHANDDEFDDLLE 86 >ref|XP_003633209.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera] Length = 319 Score = 56.2 bits (134), Expect = 3e-06 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 4/76 (5%) Frame = +2 Query: 56 LLVIMFMLPSLLFSKPNGRS---FD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHYXXX 223 + + +FM P + S NG + F+ I+ LEGCQKG KVK ++++K+YL++FGYL Y Sbjct: 11 IFLFLFMFP--ITSHANGENPSPFEFIKDLEGCQKGHKVKDIHKLKKYLQQFGYLSYSHS 68 Query: 224 XXXXXXXXXVFDDLLE 271 FDDLLE Sbjct: 69 EYQTHADNDDFDDLLE 84