BLASTX nr result

ID: Coptis24_contig00008696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008696
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]    58   9e-07
ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002311048.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003633209.1| PREDICTED: metalloendoproteinase 1-like [Vit...    56   3e-06

>ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|222850872|gb|EEE88419.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +2

Query: 56  LLVIMFMLPSLLFSKPNGRSFD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHY--XXXX 226
           +L+++ M    + SKP+G  F  I+HLEGC K   VKGL+++K+YLE+FGYL Y      
Sbjct: 12  ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHKNGSVKGLHELKRYLEKFGYLKYGHQGKK 71

Query: 227 XXXXXXXXVFDDLLE 271
                    FDDLLE
Sbjct: 72  GHNHANDDEFDDLLE 86


>emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]
          Length = 319

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = +2

Query: 35  LGLQAFLLLVIMFMLPSLLFSKPNGRS---FD-IQHLEGCQKGQKVKGLNQVKQYLERFG 202
           L   +F+LL ++F+ P  + S  NG +   F+ I+ LEGCQKG KVK ++++K+YL++FG
Sbjct: 5   LSTMSFILL-LLFLFP--ITSHANGENPSPFEFIKDLEGCQKGHKVKDIHKLKKYLQQFG 61

Query: 203 YLHYXXXXXXXXXXXXVFDDLLE 271
           YL Y             FDDLLE
Sbjct: 62  YLSYSHSEHQTHADNDDFDDLLE 84


>ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|222850870|gb|EEE88417.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +2

Query: 56  LLVIMFMLPSLLFSKPNGRSFD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHY--XXXX 226
           +L+++ M    + SKP+G  F  I+HLEGC +   VKGL+++K+YLE+FGYL Y      
Sbjct: 12  ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHRNVSVKGLHELKRYLEKFGYLKYGHQGKK 71

Query: 227 XXXXXXXXVFDDLLE 271
                    FDDLLE
Sbjct: 72  GHNHANDDEFDDLLE 86


>ref|XP_002311048.1| predicted protein [Populus trichocarpa] gi|222850868|gb|EEE88415.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +2

Query: 56  LLVIMFMLPSLLFSKPNGRSFD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHY--XXXX 226
           +L+++ M    + SKP+G  F  I+HLEGC +   VKGL+++K+YLE+FGYL Y      
Sbjct: 12  ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHRNVSVKGLHELKRYLEKFGYLKYGHQGKK 71

Query: 227 XXXXXXXXVFDDLLE 271
                    FDDLLE
Sbjct: 72  GHNHANDDEFDDLLE 86


>ref|XP_003633209.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
          Length = 319

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
 Frame = +2

Query: 56  LLVIMFMLPSLLFSKPNGRS---FD-IQHLEGCQKGQKVKGLNQVKQYLERFGYLHYXXX 223
           + + +FM P  + S  NG +   F+ I+ LEGCQKG KVK ++++K+YL++FGYL Y   
Sbjct: 11  IFLFLFMFP--ITSHANGENPSPFEFIKDLEGCQKGHKVKDIHKLKKYLQQFGYLSYSHS 68

Query: 224 XXXXXXXXXVFDDLLE 271
                     FDDLLE
Sbjct: 69  EYQTHADNDDFDDLLE 84


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