BLASTX nr result

ID: Coptis24_contig00008686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008686
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76860.1| unknown [Picea sitchensis]                             125   1e-26
ref|XP_002269040.1| PREDICTED: uncharacterized protein LOC100246...   120   4e-25
ref|XP_002887759.1| hypothetical protein ARALYDRAFT_477053 [Arab...   111   2e-22
ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|2...   111   3e-22
gb|AAC83022.1| EST gb|R65024 comes from this gene [Arabidopsis t...   108   2e-21

>gb|ADE76860.1| unknown [Picea sitchensis]
          Length = 166

 Score =  125 bits (315), Expect = 1e-26
 Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
 Frame = +2

Query: 104 RYVNNRSRSTQSENK----GGQLIEVDL---EAANPENNELLGGMRRLEDAIHGIIVRRS 262
           R +N R RS  S  K    G QLIEVDL    A N EN+  + G++RLEDAIHGI+VRR+
Sbjct: 27  RLLNARFRSGGSSRKDSEGGSQLIEVDLGDSAAENGENSSEVFGIQRLEDAIHGILVRRA 86

Query: 263 APDWLPFIPGSSYWVPPRKRPYGLVELVGKLANPXXXXXXXXXXXV-RGWPSSSFFVDDG 439
           APDWLPF+PG+SYWVPPRK    LVEL+G+L+N              RGWPSS++F++  
Sbjct: 87  APDWLPFLPGASYWVPPRKNNGSLVELLGRLSNNSMTQEESLSFTTSRGWPSSAYFIE-- 144

Query: 440 FVTAGASPYPVEMETNSINATQSEDEEG 523
               G SP+ VE+   ++   +SE+EEG
Sbjct: 145 ----GGSPHQVEVV--AVQNNKSEEEEG 166


>ref|XP_002269040.1| PREDICTED: uncharacterized protein LOC100246130 [Vitis vinifera]
          Length = 161

 Score =  120 bits (302), Expect = 4e-25
 Identities = 71/139 (51%), Positives = 90/139 (64%), Gaps = 4/139 (2%)
 Frame = +2

Query: 119 RSRSTQSENK----GGQLIEVDLEAANPENNELLGGMRRLEDAIHGIIVRRSAPDWLPFI 286
           R RS   EN+     G L E+DLEA++P+   L   + +L+DAI  I V+++ PDWLPF+
Sbjct: 32  RCRSNSPENRFLTENGFLTELDLEASDPDLEILR--ILKLDDAIDQIHVKKATPDWLPFV 89

Query: 287 PGSSYWVPPRKRPYGLVELVGKLANPXXXXXXXXXXXVRGWPSSSFFVDDGFVTAGASPY 466
           PGSS+WVPPR R  GL +LVGKLA             VRGWPSSS+FV+      GASP+
Sbjct: 90  PGSSFWVPPRGRFSGLADLVGKLAYVLSEDEAMSLTTVRGWPSSSYFVN------GASPH 143

Query: 467 PVEMETNSINATQSEDEEG 523
             E+ET S NA+QSEDEEG
Sbjct: 144 S-EVETTSNNASQSEDEEG 161


>ref|XP_002887759.1| hypothetical protein ARALYDRAFT_477053 [Arabidopsis lyrata subsp.
           lyrata] gi|297333600|gb|EFH64018.1| hypothetical protein
           ARALYDRAFT_477053 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  111 bits (278), Expect = 2e-22
 Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
 Frame = +2

Query: 119 RSRSTQSE-NKGGQLIEVDLEAANPENNELLGGMRRLEDAIHGIIVRRSAPDWLPFIPGS 295
           RS+S+    N+ G++ E+D+ AA+P        + +LEDA+H I+VRRSAPDWLPF+PG+
Sbjct: 31  RSQSSNRRFNRFGEIYEIDI-AADPL-------LHKLEDAVHRIMVRRSAPDWLPFVPGA 82

Query: 296 SYWV-PPRKRPYGLVELVGKLANPXXXXXXXXXXXVRGWPSSSFFVDDGFVTAGASPYPV 472
           SYWV PPR + +G+ +LV KLANP           VRGWP S +F+       G  P  V
Sbjct: 83  SYWVPPPRSQTHGIAKLVEKLANPISDEESISISSVRGWPCSDYFI------KGVKPQSV 136

Query: 473 EMETNSINATQSEDEE 520
           E E  S  A+ S+DEE
Sbjct: 137 ETEMTSNTASDSDDEE 152


>ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|222865476|gb|EEF02607.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  111 bits (277), Expect = 3e-22
 Identities = 58/109 (53%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
 Frame = +2

Query: 215 MRRLEDAIHGIIVRRSAPDWLPFIPGSSYWVPPRKR---PYGLVELVGKLANPXXXXXXX 385
           +R+LEDAIHGIIVRR+APDWLPF+PGSSYWVPP +      G+  LV KLANP       
Sbjct: 59  LRKLEDAIHGIIVRRAAPDWLPFLPGSSYWVPPPRSASGSLGIAHLVEKLANPLSDEESL 118

Query: 386 XXXXVRGWPSSSFFV---DDGFVTAGASPYPVEMETNSINATQSEDEEG 523
               VRGWPSS +FV       V    +   VE +T + N +QSEDEEG
Sbjct: 119 STSTVRGWPSSDYFVKGASSQLVEVKLNSKKVEADTTTSNTSQSEDEEG 167


>gb|AAC83022.1| EST gb|R65024 comes from this gene [Arabidopsis thaliana]
          Length = 156

 Score =  108 bits (270), Expect = 2e-21
 Identities = 65/137 (47%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
 Frame = +2

Query: 113 NNRSRSTQSENKGGQLIEVDLEAANPENNELLGGMRRLEDAIHGIIVRRSAPDWLPFIPG 292
           N RS S    N  G + E+D+ AA+P  N       +LEDA+H I+VRRSAPDWLPF+PG
Sbjct: 37  NRRSNS----NHLGVIYEIDI-AADPLVN-------KLEDAVHRIMVRRSAPDWLPFVPG 84

Query: 293 SSYWV-PPRKRPYGLVELVGKLANPXXXXXXXXXXXVRGWPSSSFFVDDGFVTAGASPYP 469
           +S+WV PPR + +G+ +LV KLANP           VRGWP S     D F+  G  P  
Sbjct: 85  ASFWVPPPRSQSHGIAKLVEKLANPISDEESISISSVRGWPCS-----DYFIKGGVKPQS 139

Query: 470 VEMETNSINATQSEDEE 520
           VE E  S  A  SEDEE
Sbjct: 140 VETEMTSNTAYHSEDEE 156


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