BLASTX nr result
ID: Coptis24_contig00008685
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008685 (1118 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l... 245 2e-62 ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1... 243 6e-62 ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [... 241 2e-61 ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2... 237 4e-60 gb|ABS50234.1| Ran binding protein [Nicotiana benthamiana] 237 4e-60 >ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera] Length = 223 Score = 245 bits (625), Expect = 2e-62 Identities = 125/188 (66%), Positives = 155/188 (82%), Gaps = 4/188 (2%) Frame = +1 Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282 GA+VAPIV+LE+V V+TGEE+E +LDLKAKLYR+DK G QWKERG G+VK LKHK+SGK Sbjct: 24 GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83 Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462 VRLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF SVE Sbjct: 84 VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143 Query: 463 NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKTE-KAGEKVPVAADEEK- 630 NCK+FM+K + + + + +EN++ SAAA LLE+ L++ + +TE KA E+ PVAA EEK Sbjct: 144 NCKSFMEKVQEVAESQQKKEENKDASAAAGLLEK-LSVEEKETEDKAEEEKPVAAKEEKE 202 Query: 631 PESEDGET 654 ESE G+T Sbjct: 203 TESEQGKT 210 >ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1| unknown [Populus trichocarpa] gi|222845745|gb|EEE83292.1| predicted protein [Populus trichocarpa] Length = 218 Score = 243 bits (620), Expect = 6e-62 Identities = 122/191 (63%), Positives = 154/191 (80%), Gaps = 4/191 (2%) Frame = +1 Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282 GA+VAPIV+LE+V VSTGEE+E +LDLK+KLYR+DK G QWKERG G VKFLKHK+SGK Sbjct: 25 GAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKESGK 84 Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462 VRLVMRQSKTLKICANH ++P MSVQEH G+EKSCVWHA DF+D ELK ELFCIRF SVE Sbjct: 85 VRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFASVE 144 Query: 463 NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKT-EKAGEKVPVAADEEKP 633 NCKTFM+ F+ + + + +EN++ +AAA+ L++ L++ + KT EKA E+ P AA EE+ Sbjct: 145 NCKTFMEMFQEVAESQKSNEENKDATAAADALDK-LSVEEKKTEEKAVEESPTAAKEEET 203 Query: 634 ES-EDGETRSP 663 ++ ED + P Sbjct: 204 KTCEDKKEEKP 214 >ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [Vitis vinifera] gi|296081117|emb|CBI18249.3| unnamed protein product [Vitis vinifera] Length = 221 Score = 241 bits (615), Expect = 2e-61 Identities = 125/199 (62%), Positives = 153/199 (76%), Gaps = 12/199 (6%) Frame = +1 Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282 GA+VAPIV+LE V V+TGEE E +LDLKAKLYR+DK+GKQWKERGVG VKFLKHK SGK Sbjct: 23 GAQVAPIVKLEVVAVTTGEEEEDAILDLKAKLYRFDKEGKQWKERGVGTVKFLKHKGSGK 82 Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462 VRLVMRQSKTLKICANH ++P M+VQEH G++KSCVWHA DF+D ELK ELFCIRF SVE Sbjct: 83 VRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVWHATDFADGELKDELFCIRFASVE 142 Query: 463 NCKTFMQKFEGITDV--VEDENREGSAAAELLERQLNINDGKTEKAGE-------KVPVA 615 NCKTFM+ F+ + + ++E+ + SAAA LLE+ L++ D KTE G+ K VA Sbjct: 143 NCKTFMEMFQEVAESQGKKEESEDASAAAGLLEK-LSVGDSKTEDKGQEEGSLATKEKVA 201 Query: 616 ADEEKPESE---DGETRSP 663 D+E+ ++E ET SP Sbjct: 202 VDKEEVQAEADKKDETESP 220 >ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1| predicted protein [Populus trichocarpa] Length = 218 Score = 237 bits (604), Expect = 4e-60 Identities = 119/193 (61%), Positives = 150/193 (77%), Gaps = 6/193 (3%) Frame = +1 Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282 GA+VAPIV+LE+V VSTGEE+E +LDLK+KLYR+DK G QWKERG G VK LKHK+SGK Sbjct: 25 GAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESGK 84 Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462 VRLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF SVE Sbjct: 85 VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 144 Query: 463 NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKTEK-AGEKVPVAADEEKP 633 NCKTFM+ F+ + + E +EN + + AA+ LE+ L++ KTE+ AGE+ P A E+ Sbjct: 145 NCKTFMEMFQEVAESQESKEENEDATVAADALEK-LSVEGKKTEENAGEEAPAATKNEET 203 Query: 634 ESE---DGETRSP 663 +++ GE +P Sbjct: 204 KTDTDKKGEKPAP 216 >gb|ABS50234.1| Ran binding protein [Nicotiana benthamiana] Length = 221 Score = 237 bits (604), Expect = 4e-60 Identities = 116/196 (59%), Positives = 151/196 (77%), Gaps = 1/196 (0%) Frame = +1 Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282 GA+VAPIV+LE+VTVSTGEENE ++DLKAKLYR+DK G QWKERG G VK LKHK++GK Sbjct: 26 GAQVAPIVKLEEVTVSTGEENEDPIIDLKAKLYRFDKDGNQWKERGAGTVKLLKHKENGK 85 Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462 VRLVMRQSKTLKICANH ++P M++QEH G+EKSC+WHA DF+D ELK ELFC+RF S+E Sbjct: 86 VRLVMRQSKTLKICANHLVLPTMTLQEHAGNEKSCLWHAPDFADGELKDELFCLRFASIE 145 Query: 463 NCKTFMQKFEGITDVVED-ENREGSAAAELLERQLNINDGKTEKAGEKVPVAADEEKPES 639 NCK+FM+ F+ + + + EN +GS AAELLE+ L++ D K+E+ E E+K + Sbjct: 146 NCKSFMEMFQEVAESQKKVENEDGSTAAELLEK-LSVEDKKSEEKSED----KAEDKTKE 200 Query: 640 EDGETRSPGEGVTVKE 687 DG+ +P + K+ Sbjct: 201 GDGKDENPSKDTEKKD 216