BLASTX nr result

ID: Coptis24_contig00008685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008685
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   245   2e-62
ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1...   243   6e-62
ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [...   241   2e-61
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   237   4e-60
gb|ABS50234.1| Ran binding protein [Nicotiana benthamiana]            237   4e-60

>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  245 bits (625), Expect = 2e-62
 Identities = 125/188 (66%), Positives = 155/188 (82%), Gaps = 4/188 (2%)
 Frame = +1

Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282
           GA+VAPIV+LE+V V+TGEE+E  +LDLKAKLYR+DK G QWKERG G+VK LKHK+SGK
Sbjct: 24  GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83

Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462
           VRLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 84  VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143

Query: 463 NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKTE-KAGEKVPVAADEEK- 630
           NCK+FM+K + + +  +  +EN++ SAAA LLE+ L++ + +TE KA E+ PVAA EEK 
Sbjct: 144 NCKSFMEKVQEVAESQQKKEENKDASAAAGLLEK-LSVEEKETEDKAEEEKPVAAKEEKE 202

Query: 631 PESEDGET 654
            ESE G+T
Sbjct: 203 TESEQGKT 210


>ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1|
           unknown [Populus trichocarpa]
           gi|222845745|gb|EEE83292.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  243 bits (620), Expect = 6e-62
 Identities = 122/191 (63%), Positives = 154/191 (80%), Gaps = 4/191 (2%)
 Frame = +1

Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282
           GA+VAPIV+LE+V VSTGEE+E  +LDLK+KLYR+DK G QWKERG G VKFLKHK+SGK
Sbjct: 25  GAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKESGK 84

Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462
           VRLVMRQSKTLKICANH ++P MSVQEH G+EKSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 85  VRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFASVE 144

Query: 463 NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKT-EKAGEKVPVAADEEKP 633
           NCKTFM+ F+ + +  +  +EN++ +AAA+ L++ L++ + KT EKA E+ P AA EE+ 
Sbjct: 145 NCKTFMEMFQEVAESQKSNEENKDATAAADALDK-LSVEEKKTEEKAVEESPTAAKEEET 203

Query: 634 ES-EDGETRSP 663
           ++ ED +   P
Sbjct: 204 KTCEDKKEEKP 214


>ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [Vitis vinifera]
           gi|296081117|emb|CBI18249.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  241 bits (615), Expect = 2e-61
 Identities = 125/199 (62%), Positives = 153/199 (76%), Gaps = 12/199 (6%)
 Frame = +1

Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282
           GA+VAPIV+LE V V+TGEE E  +LDLKAKLYR+DK+GKQWKERGVG VKFLKHK SGK
Sbjct: 23  GAQVAPIVKLEVVAVTTGEEEEDAILDLKAKLYRFDKEGKQWKERGVGTVKFLKHKGSGK 82

Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462
           VRLVMRQSKTLKICANH ++P M+VQEH G++KSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 83  VRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVWHATDFADGELKDELFCIRFASVE 142

Query: 463 NCKTFMQKFEGITDV--VEDENREGSAAAELLERQLNINDGKTEKAGE-------KVPVA 615
           NCKTFM+ F+ + +    ++E+ + SAAA LLE+ L++ D KTE  G+       K  VA
Sbjct: 143 NCKTFMEMFQEVAESQGKKEESEDASAAAGLLEK-LSVGDSKTEDKGQEEGSLATKEKVA 201

Query: 616 ADEEKPESE---DGETRSP 663
            D+E+ ++E     ET SP
Sbjct: 202 VDKEEVQAEADKKDETESP 220


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  237 bits (604), Expect = 4e-60
 Identities = 119/193 (61%), Positives = 150/193 (77%), Gaps = 6/193 (3%)
 Frame = +1

Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282
           GA+VAPIV+LE+V VSTGEE+E  +LDLK+KLYR+DK G QWKERG G VK LKHK+SGK
Sbjct: 25  GAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESGK 84

Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462
           VRLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 85  VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 144

Query: 463 NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKTEK-AGEKVPVAADEEKP 633
           NCKTFM+ F+ + +  E  +EN + + AA+ LE+ L++   KTE+ AGE+ P A   E+ 
Sbjct: 145 NCKTFMEMFQEVAESQESKEENEDATVAADALEK-LSVEGKKTEENAGEEAPAATKNEET 203

Query: 634 ESE---DGETRSP 663
           +++    GE  +P
Sbjct: 204 KTDTDKKGEKPAP 216


>gb|ABS50234.1| Ran binding protein [Nicotiana benthamiana]
          Length = 221

 Score =  237 bits (604), Expect = 4e-60
 Identities = 116/196 (59%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
 Frame = +1

Query: 103 GAEVAPIVQLEQVTVSTGEENEHVLLDLKAKLYRYDKQGKQWKERGVGNVKFLKHKDSGK 282
           GA+VAPIV+LE+VTVSTGEENE  ++DLKAKLYR+DK G QWKERG G VK LKHK++GK
Sbjct: 26  GAQVAPIVKLEEVTVSTGEENEDPIIDLKAKLYRFDKDGNQWKERGAGTVKLLKHKENGK 85

Query: 283 VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 462
           VRLVMRQSKTLKICANH ++P M++QEH G+EKSC+WHA DF+D ELK ELFC+RF S+E
Sbjct: 86  VRLVMRQSKTLKICANHLVLPTMTLQEHAGNEKSCLWHAPDFADGELKDELFCLRFASIE 145

Query: 463 NCKTFMQKFEGITDVVED-ENREGSAAAELLERQLNINDGKTEKAGEKVPVAADEEKPES 639
           NCK+FM+ F+ + +  +  EN +GS AAELLE+ L++ D K+E+  E       E+K + 
Sbjct: 146 NCKSFMEMFQEVAESQKKVENEDGSTAAELLEK-LSVEDKKSEEKSED----KAEDKTKE 200

Query: 640 EDGETRSPGEGVTVKE 687
            DG+  +P +    K+
Sbjct: 201 GDGKDENPSKDTEKKD 216


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