BLASTX nr result

ID: Coptis24_contig00008683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008683
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331860.1| predicted protein [Populus trichocarpa] gi|2...   247   8e-64
ref|XP_002272365.1| PREDICTED: uncharacterized protein LOC100258...   246   1e-63
ref|XP_002519756.1| vav3, putative [Ricinus communis] gi|2235411...   243   2e-62
ref|NP_193540.3| SH3 domain-containing protein [Arabidopsis thal...   235   2e-60
emb|CAB53647.1| putative protein [Arabidopsis thaliana] gi|72685...   235   2e-60

>ref|XP_002331860.1| predicted protein [Populus trichocarpa] gi|222875378|gb|EEF12509.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  247 bits (630), Expect = 8e-64
 Identities = 120/167 (71%), Positives = 141/167 (84%)
 Frame = +1

Query: 19  MDAFRKQANKFKEXXXXXXXXXXXXFSGTGYEHSDVVVIDEVELQRHQQIEKLYRSTRSG 198
           MDA RKQA+K +E            FSGTGYE SDV+VIDEVE+ RHQQ+EKLYRSTRSG
Sbjct: 1   MDALRKQASKLREQVAKQQQAVIKQFSGTGYESSDVMVIDEVEMHRHQQLEKLYRSTRSG 60

Query: 199 KEFQRDIVRATEAFTTLGIKDIEIGTKLSEDCSRYGSENANDNILVKAASVYGDARIHVE 378
           K+FQ+D+V+A EAFTT+G + IE GTKLSEDC RYG+EN N+N+L KAA++YGDAR HVE
Sbjct: 61  KDFQKDVVKAAEAFTTIGYRHIEAGTKLSEDCCRYGTENINENMLAKAAAIYGDARKHVE 120

Query: 379 KEQEDLNRLLSSQILEPLRAMITGAPLEEARHLAQRYSRMRQDAETQ 519
           +EQ+DLNRLLSSQ+LEPLRAMI G PLE+ARHLAQRYSRMRQ+AETQ
Sbjct: 121 QEQDDLNRLLSSQVLEPLRAMINGGPLEDARHLAQRYSRMRQEAETQ 167


>ref|XP_002272365.1| PREDICTED: uncharacterized protein LOC100258967 [Vitis vinifera]
           gi|297740624|emb|CBI30806.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  246 bits (629), Expect = 1e-63
 Identities = 121/167 (72%), Positives = 139/167 (83%)
 Frame = +1

Query: 19  MDAFRKQANKFKEXXXXXXXXXXXXFSGTGYEHSDVVVIDEVELQRHQQIEKLYRSTRSG 198
           MDA RKQA+KF+E            F GTGYE SDV+VIDEVE+QRHQQ+EKLYRSTR+G
Sbjct: 1   MDALRKQASKFREQVAKQQQAVIKQFGGTGYESSDVMVIDEVEMQRHQQLEKLYRSTRAG 60

Query: 199 KEFQRDIVRATEAFTTLGIKDIEIGTKLSEDCSRYGSENANDNILVKAASVYGDARIHVE 378
           K+FQ+DIVRA EAFT +G K IE GTKLSEDC RYG+EN NDNIL +AAS+YGD   H+ 
Sbjct: 61  KDFQKDIVRAGEAFTAIGYKQIETGTKLSEDCCRYGAENINDNILARAASIYGDGLKHIA 120

Query: 379 KEQEDLNRLLSSQILEPLRAMITGAPLEEARHLAQRYSRMRQDAETQ 519
           KEQEDLN+LLSSQIL+PLRAM+TGAPLE+ARHLAQRYSRMR +AETQ
Sbjct: 121 KEQEDLNKLLSSQILDPLRAMVTGAPLEDARHLAQRYSRMRHEAETQ 167


>ref|XP_002519756.1| vav3, putative [Ricinus communis] gi|223541173|gb|EEF42729.1| vav3,
           putative [Ricinus communis]
          Length = 347

 Score =  243 bits (619), Expect = 2e-62
 Identities = 121/167 (72%), Positives = 137/167 (82%)
 Frame = +1

Query: 19  MDAFRKQANKFKEXXXXXXXXXXXXFSGTGYEHSDVVVIDEVELQRHQQIEKLYRSTRSG 198
           MDA RKQA K +E            FSGTGYE SDV+VIDEVE+QRHQQ+EKLYRSTR+G
Sbjct: 1   MDALRKQAFKLREQVAKQQQAVIKQFSGTGYESSDVMVIDEVEMQRHQQLEKLYRSTRAG 60

Query: 199 KEFQRDIVRATEAFTTLGIKDIEIGTKLSEDCSRYGSENANDNILVKAASVYGDARIHVE 378
           K+FQ+DIV+A E FT +G K IE GTKLSEDC RYG+ENANDNIL K A +YG+AR HVE
Sbjct: 61  KDFQKDIVKAAETFTAIGYKHIEAGTKLSEDCCRYGTENANDNILSKGAGIYGEARKHVE 120

Query: 379 KEQEDLNRLLSSQILEPLRAMITGAPLEEARHLAQRYSRMRQDAETQ 519
           KEQEDL RLLSSQ+L+PLR MI GAPLE+ARHLAQRYSRMRQ+AETQ
Sbjct: 121 KEQEDLIRLLSSQVLDPLRTMINGAPLEDARHLAQRYSRMRQEAETQ 167


>ref|NP_193540.3| SH3 domain-containing protein [Arabidopsis thaliana]
           gi|21928139|gb|AAM78097.1| AT4g18060/F15J5_30
           [Arabidopsis thaliana] gi|25090269|gb|AAN72266.1|
           At4g18060/F15J5_30 [Arabidopsis thaliana]
           gi|332658589|gb|AEE83989.1| SH3 domain-containing
           protein [Arabidopsis thaliana]
          Length = 351

 Score =  235 bits (600), Expect = 2e-60
 Identities = 114/169 (67%), Positives = 142/169 (84%), Gaps = 3/169 (1%)
 Frame = +1

Query: 19  MDAFRKQANKFKEXXXXXXXXXXXXFSGTGYEHSDVVVIDEVELQRHQQIEKLYRSTRSG 198
           MDAFR+QA+K ++            FSGTGYE SDV+VIDE+E+QRH Q++KLYRSTRS 
Sbjct: 1   MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query: 199 KEFQRDIVRATEAFTTLGIKDIEIGTKLSEDCSRYGSENA---NDNILVKAASVYGDARI 369
           KEFQRDIV+A EAFTT+G++ IE GTKLSEDC RYG+EN+   ++NIL KAA++YGDAR 
Sbjct: 61  KEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARK 120

Query: 370 HVEKEQEDLNRLLSSQILEPLRAMITGAPLEEARHLAQRYSRMRQDAET 516
           HV+KEQED N+LL+SQ+L+PLRAM+ G+PLE+ARHLAQRYSRMRQ+AET
Sbjct: 121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAET 169


>emb|CAB53647.1| putative protein [Arabidopsis thaliana] gi|7268558|emb|CAB78808.1|
           putative protein [Arabidopsis thaliana]
          Length = 330

 Score =  235 bits (600), Expect = 2e-60
 Identities = 114/169 (67%), Positives = 142/169 (84%), Gaps = 3/169 (1%)
 Frame = +1

Query: 19  MDAFRKQANKFKEXXXXXXXXXXXXFSGTGYEHSDVVVIDEVELQRHQQIEKLYRSTRSG 198
           MDAFR+QA+K ++            FSGTGYE SDV+VIDE+E+QRH Q++KLYRSTRS 
Sbjct: 1   MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query: 199 KEFQRDIVRATEAFTTLGIKDIEIGTKLSEDCSRYGSENA---NDNILVKAASVYGDARI 369
           KEFQRDIV+A EAFTT+G++ IE GTKLSEDC RYG+EN+   ++NIL KAA++YGDAR 
Sbjct: 61  KEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARK 120

Query: 370 HVEKEQEDLNRLLSSQILEPLRAMITGAPLEEARHLAQRYSRMRQDAET 516
           HV+KEQED N+LL+SQ+L+PLRAM+ G+PLE+ARHLAQRYSRMRQ+AET
Sbjct: 121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAET 169


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