BLASTX nr result

ID: Coptis24_contig00008676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008676
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049806.1| Os03g0292800 [Oryza sativa Japonica Group] g...    83   2e-14
ref|XP_002465415.1| hypothetical protein SORBIDRAFT_01g038390 [S...    83   3e-14
ref|XP_002322995.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
gb|ABK92633.1| unknown [Populus trichocarpa]                           83   3e-14
gb|EEE63364.1| hypothetical protein OsJ_18176 [Oryza sativa Japo...    83   3e-14

>ref|NP_001049806.1| Os03g0292800 [Oryza sativa Japonica Group]
           gi|108707611|gb|ABF95406.1| Ran-binding protein 1,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113548277|dbj|BAF11720.1| Os03g0292800 [Oryza sativa
           Japonica Group] gi|215697710|dbj|BAG91704.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218192599|gb|EEC75026.1| hypothetical protein
           OsI_11117 [Oryza sativa Indica Group]
           gi|222624729|gb|EEE58861.1| hypothetical protein
           OsJ_10458 [Oryza sativa Japonica Group]
          Length = 209

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKE 2
           GAQ+API+KLEEVAVTTGEE E VLLD+K+KLYRFDKEGNQWKE
Sbjct: 26  GAQVAPIVKLEEVAVTTGEEDEEVLLDMKSKLYRFDKEGNQWKE 69


>ref|XP_002465415.1| hypothetical protein SORBIDRAFT_01g038390 [Sorghum bicolor]
           gi|241919269|gb|EER92413.1| hypothetical protein
           SORBIDRAFT_01g038390 [Sorghum bicolor]
          Length = 209

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKE 2
           GAQ+API+KLEEVAVTTGEE E VLLD+KAKLYRFDK+GNQWKE
Sbjct: 26  GAQVAPIVKLEEVAVTTGEEDEDVLLDMKAKLYRFDKDGNQWKE 69


>ref|XP_002322995.1| predicted protein [Populus trichocarpa] gi|222867625|gb|EEF04756.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -3

Query: 133 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKE 2
           GAQ+API+KLEEVAVTTGEE E  +LDLKAKLYRFDKEGNQWKE
Sbjct: 37  GAQVAPIVKLEEVAVTTGEEDEEAILDLKAKLYRFDKEGNQWKE 80


>gb|ABK92633.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -3

Query: 133 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKE 2
           GAQ+API+KLEEVAVTTGEE E  +LDLKAKLYRFDKEGNQWKE
Sbjct: 37  GAQVAPIVKLEEVAVTTGEEDEEAILDLKAKLYRFDKEGNQWKE 80


>gb|EEE63364.1| hypothetical protein OsJ_18176 [Oryza sativa Japonica Group]
          Length = 194

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -3

Query: 133 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKE 2
           GAQ+API++LEEVAVTTGEE E VLLD+KAKLYRFDKEGNQWKE
Sbjct: 32  GAQVAPIVRLEEVAVTTGEEDEDVLLDMKAKLYRFDKEGNQWKE 75


Top