BLASTX nr result

ID: Coptis24_contig00008656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008656
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145420.1| PREDICTED: 50S ribosomal protein L24-like [C...   150   8e-35
gb|ACF72672.1| ribosomal protein L24 [Cucumis melo var. cantalup...   150   8e-35
gb|AFK48729.1| unknown [Medicago truncatula]                          149   2e-34
ref|XP_004166518.1| PREDICTED: 50S ribosomal protein L24-like [C...   149   2e-34
ref|XP_003518911.1| PREDICTED: 50S ribosomal protein L24-like [G...   146   2e-33

>ref|XP_004145420.1| PREDICTED: 50S ribosomal protein L24-like [Cucumis sativus]
           gi|449471005|ref|XP_004153180.1| PREDICTED: 50S
           ribosomal protein L24-like [Cucumis sativus]
          Length = 180

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/76 (93%), Positives = 76/76 (100%)
 Frame = +1

Query: 1   WRILRGDNVMIIRGKDKGETGVIKRVIRSQNRVLVEGKNLVKKHIKQGQGHEGGIFTVEA 180
           W+ILRGDNVMIIRGKDKGETGVIKRVIR+QNRV+VEGKNLVKKHIKQGQGHEGGIFTVEA
Sbjct: 13  WKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEA 72

Query: 181 PLHVSNVQVLDPITGK 228
           PLHVSNVQV+DP+TGK
Sbjct: 73  PLHVSNVQVIDPVTGK 88


>gb|ACF72672.1| ribosomal protein L24 [Cucumis melo var. cantalupensis]
          Length = 159

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/76 (93%), Positives = 76/76 (100%)
 Frame = +1

Query: 1   WRILRGDNVMIIRGKDKGETGVIKRVIRSQNRVLVEGKNLVKKHIKQGQGHEGGIFTVEA 180
           W+ILRGDNVMIIRGKDKGETGVIKRVIR+QNRV+VEGKNLVKKHIKQGQGHEGGIFTVEA
Sbjct: 13  WKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEA 72

Query: 181 PLHVSNVQVLDPITGK 228
           PLHVSNVQV+DP+TGK
Sbjct: 73  PLHVSNVQVIDPVTGK 88


>gb|AFK48729.1| unknown [Medicago truncatula]
          Length = 159

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/76 (90%), Positives = 75/76 (98%)
 Frame = +1

Query: 1   WRILRGDNVMIIRGKDKGETGVIKRVIRSQNRVLVEGKNLVKKHIKQGQGHEGGIFTVEA 180
           W++LRGDNVMIIRGKDKGETGVIKRV+RSQNRV+VEGKNLVKKHIKQGQGHEGGIFTVEA
Sbjct: 13  WKVLRGDNVMIIRGKDKGETGVIKRVVRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEA 72

Query: 181 PLHVSNVQVLDPITGK 228
           P+H SNVQVLDP+TGK
Sbjct: 73  PIHASNVQVLDPVTGK 88


>ref|XP_004166518.1| PREDICTED: 50S ribosomal protein L24-like [Cucumis sativus]
          Length = 159

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/76 (92%), Positives = 76/76 (100%)
 Frame = +1

Query: 1   WRILRGDNVMIIRGKDKGETGVIKRVIRSQNRVLVEGKNLVKKHIKQGQGHEGGIFTVEA 180
           W+ILRGDNVMIIRGKDKGETGVIKRVIR+QNRV+VEGKNLV+KHIKQGQGHEGGIFTVEA
Sbjct: 13  WKILRGDNVMIIRGKDKGETGVIKRVIRTQNRVIVEGKNLVEKHIKQGQGHEGGIFTVEA 72

Query: 181 PLHVSNVQVLDPITGK 228
           PLHVSNVQV+DP+TGK
Sbjct: 73  PLHVSNVQVIDPVTGK 88


>ref|XP_003518911.1| PREDICTED: 50S ribosomal protein L24-like [Glycine max]
          Length = 159

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = +1

Query: 1   WRILRGDNVMIIRGKDKGETGVIKRVIRSQNRVLVEGKNLVKKHIKQGQGHEGGIFTVEA 180
           W+ILRGDNVMI RGKDKGETG+IKRVIRSQNRV+VE KNLVKKHIKQGQGHEGGIFTVEA
Sbjct: 13  WKILRGDNVMITRGKDKGETGIIKRVIRSQNRVIVESKNLVKKHIKQGQGHEGGIFTVEA 72

Query: 181 PLHVSNVQVLDPITGK 228
           PLH SNVQVLDP+TGK
Sbjct: 73  PLHASNVQVLDPVTGK 88


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